RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 ANKRD36CQ5JPF3 1778 aa20.11■□□□□ 0.81
FOXR1-201ENST00000317011 PPIP5K2O43314 1243 aa20.11■□□□□ 0.81
FOXR1-201ENST00000317011 SCNN1DP51172 638 aa20.11■□□□□ 0.81
FOXR1-201ENST00000317011 KIAA2012Q0VF49 1180 aa20.11■□□□□ 0.81
FOXR1-201ENST00000317011 AOC3Q16853 763 aa20.11■□□□□ 0.81
FOXR1-201ENST00000317011 IL16Q14005 1332 aa20.1■□□□□ 0.81
FOXR1-201ENST00000317011 IRS4O14654 1257 aaPredicted RBP20.1■□□□□ 0.81
FOXR1-201ENST00000317011 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
FOXR1-201ENST00000317011 DPP8Q6V1X1 898 aaPredicted RBP20.1■□□□□ 0.81
FOXR1-201ENST00000317011 NIM1KQ8IY84 436 aa20.1■□□□□ 0.81
FOXR1-201ENST00000317011 CCDC191Q8NCU4 936 aa20.1■□□□□ 0.81
FOXR1-201ENST00000317011 CELF1Q92879 486 aaKnown RBP20.1■□□□□ 0.81
FOXR1-201ENST00000317011 ZNF428Q96B54 188 aa20.1■□□□□ 0.81
FOXR1-201ENST00000317011 METTL22Q9BUU2 404 aaPredicted RBP20.1■□□□□ 0.81
FOXR1-201ENST00000317011 ZNRF3Q9ULT6 936 aa20.1■□□□□ 0.81
FOXR1-201ENST00000317011 EPS15P42566 896 aa20.09■□□□□ 0.81
FOXR1-201ENST00000317011 CXCL9Q07325 125 aa20.09■□□□□ 0.81
FOXR1-201ENST00000317011 GJA3Q9Y6H8 435 aa20.09■□□□□ 0.81
FOXR1-201ENST00000317011 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
FOXR1-201ENST00000317011 CNTROBQ8N137 903 aa20.08■□□□□ 0.81
FOXR1-201ENST00000317011 ADAMTSL1Q8N6G6 1762 aa20.08■□□□□ 0.8
FOXR1-201ENST00000317011 PCCAP05165 728 aaPredicted RBP20.07■□□□□ 0.8
FOXR1-201ENST00000317011 RPS8P62241 208 aaKnown RBP20.07■□□□□ 0.8
FOXR1-201ENST00000317011 TSR2Q969E8 191 aaKnown RBP20.07■□□□□ 0.8
FOXR1-201ENST00000317011 MYD88Q99836 296 aa20.07■□□□□ 0.8
FOXR1-201ENST00000317011 LAMB2P55268 1798 aa20.06■□□□□ 0.8
FOXR1-201ENST00000317011 ANP32CO43423 234 aa20.06■□□□□ 0.8
FOXR1-201ENST00000317011 DDX58O95786 925 aaKnown RBP20.06■□□□□ 0.8
FOXR1-201ENST00000317011 KSR2Q6VAB6 950 aa20.06■□□□□ 0.8
FOXR1-201ENST00000317011 USP50Q70EL3 339 aaPredicted RBP20.06■□□□□ 0.8
FOXR1-201ENST00000317011 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
FOXR1-201ENST00000317011 CLEC11AQ9Y240 323 aa20.06■□□□□ 0.8
FOXR1-201ENST00000317011 HSP90B1P14625 803 aaKnown RBP20.05■□□□□ 0.8
FOXR1-201ENST00000317011 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
FOXR1-201ENST00000317011 MAP1SQ66K74 1059 aaPredicted RBP20.05■□□□□ 0.8
FOXR1-201ENST00000317011 GPRC5DQ9NZD1 345 aa20.05■□□□□ 0.8
FOXR1-201ENST00000317011 TMEM88BA6NKF7 163 aa20.04■□□□□ 0.8
FOXR1-201ENST00000317011 YDJCA8MPS7 323 aa20.04■□□□□ 0.8
FOXR1-201ENST00000317011 IGKV5-2P06315 115 aa20.04■□□□□ 0.8
FOXR1-201ENST00000317011 LMOD1P29536 600 aaPredicted RBP20.04■□□□□ 0.8
FOXR1-201ENST00000317011 WDR63Q8IWG1 891 aa20.04■□□□□ 0.8
FOXR1-201ENST00000317011 CWC25Q9NXE8 425 aaPredicted RBP20.04■□□□□ 0.8
FOXR1-201ENST00000317011 POLLQ9UGP5 575 aa20.04■□□□□ 0.8
FOXR1-201ENST00000317011 PGAP2Q9UHJ9 254 aa20.04■□□□□ 0.8
FOXR1-201ENST00000317011 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
FOXR1-201ENST00000317011 LTBP1Q14766 1721 aa20.03■□□□□ 0.8
FOXR1-201ENST00000317011 DDX60Q8IY21 1712 aaKnown RBP20.03■□□□□ 0.8
FOXR1-201ENST00000317011 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
FOXR1-201ENST00000317011 PDE8AO60658 829 aa20.03■□□□□ 0.8
FOXR1-201ENST00000317011 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
FOXR1-201ENST00000317011 CIAPIN1Q6FI81 312 aa20.03■□□□□ 0.8
FOXR1-201ENST00000317011 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
FOXR1-201ENST00000317011 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
FOXR1-201ENST00000317011 NSFL1CQ9UNZ2 370 aaKnown RBP20.03■□□□□ 0.8
FOXR1-201ENST00000317011 GPSM2P81274 684 aa20.02■□□□□ 0.8
FOXR1-201ENST00000317011 TNIP1Q15025 636 aa20.02■□□□□ 0.8
FOXR1-201ENST00000317011 SEC31BQ9NQW1 1179 aa20.02■□□□□ 0.8
FOXR1-201ENST00000317011 ADARB2Q9NS39 739 aaKnown RBP20.02■□□□□ 0.8
FOXR1-201ENST00000317011 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
FOXR1-201ENST00000317011 TAF1P21675 1872 aa20.01■□□□□ 0.79
FOXR1-201ENST00000317011 CNTNAP1P78357 1384 aa20.01■□□□□ 0.79
FOXR1-201ENST00000317011 VAMP4O75379 141 aa20.01■□□□□ 0.79
FOXR1-201ENST00000317011 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
FOXR1-201ENST00000317011 WASHC4Q2M389 1173 aa20.01■□□□□ 0.79
FOXR1-201ENST00000317011 G2E3Q7L622 706 aa20.01■□□□□ 0.79
FOXR1-201ENST00000317011 DUOX1Q9NRD9 1551 aa20■□□□□ 0.79
FOXR1-201ENST00000317011 GMPSP49915 693 aaPredicted RBP20■□□□□ 0.79
FOXR1-201ENST00000317011 CCDC152Q4G0S7 254 aa20■□□□□ 0.79
FOXR1-201ENST00000317011 TBC1D16Q8TBP0 767 aa20■□□□□ 0.79
FOXR1-201ENST00000317011 JARID2Q92833 1246 aaPredicted RBP20■□□□□ 0.79
FOXR1-201ENST00000317011 STK31Q9BXU1 1019 aa20■□□□□ 0.79
FOXR1-201ENST00000317011 MKRN1Q9UHC7 482 aaKnown RBP20■□□□□ 0.79
FOXR1-201ENST00000317011 COL4A1P02462 1669 aa20■□□□□ 0.79
FOXR1-201ENST00000317011 H7C1W4 665 aa19.99■□□□□ 0.79
FOXR1-201ENST00000317011 RAD17O75943 681 aa19.99■□□□□ 0.79
FOXR1-201ENST00000317011 DPF2Q92785 391 aa19.99■□□□□ 0.79
FOXR1-201ENST00000317011 RASSF10A6NK89 507 aa19.98■□□□□ 0.79
FOXR1-201ENST00000317011 HSPA1AP0DMV8 641 aaKnown RBP19.98■□□□□ 0.79
FOXR1-201ENST00000317011 HSPA1BP0DMV9 641 aaKnown RBP19.98■□□□□ 0.79
FOXR1-201ENST00000317011 HIRAP54198 1017 aaPredicted RBP19.98■□□□□ 0.79
FOXR1-201ENST00000317011 COL13A1Q5TAT6 717 aaPredicted RBP19.98■□□□□ 0.79
FOXR1-201ENST00000317011 TTLL11Q8NHH1 800 aa19.98■□□□□ 0.79
FOXR1-201ENST00000317011 ZC3H15Q8WU90 426 aaKnown RBP19.98■□□□□ 0.79
FOXR1-201ENST00000317011 LRRC37AA6NMS7 1700 aa19.98■□□□□ 0.79
FOXR1-201ENST00000317011 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
FOXR1-201ENST00000317011 NEURL1BA8MQ27 555 aa19.97■□□□□ 0.79
FOXR1-201ENST00000317011 VEGFBP49765 207 aa19.97■□□□□ 0.79
FOXR1-201ENST00000317011 CST9Q5W186 159 aa19.97■□□□□ 0.79
FOXR1-201ENST00000317011 EYA3Q99504 573 aa19.97■□□□□ 0.79
FOXR1-201ENST00000317011 SPINK5Q9NQ38 1064 aaPredicted RBP19.97■□□□□ 0.79
FOXR1-201ENST00000317011 CNOT7Q9UIV1 285 aaKnown RBP19.97■□□□□ 0.79
FOXR1-201ENST00000317011 C6orf229H3BNL8 230 aa19.96■□□□□ 0.79
FOXR1-201ENST00000317011 KCNQ5Q9NR82 932 aa19.96■□□□□ 0.79
FOXR1-201ENST00000317011 PSMD14O00487 310 aa19.95■□□□□ 0.78
FOXR1-201ENST00000317011 RIMBP2O15034 1052 aa19.95■□□□□ 0.78
FOXR1-201ENST00000317011 FMR1Q06787 632 aaKnown RBP eCLIP19.95■□□□□ 0.78
FOXR1-201ENST00000317011 NEXNQ0ZGT2 675 aa19.95■□□□□ 0.78
FOXR1-201ENST00000317011 FLIIQ13045 1269 aa19.95■□□□□ 0.78
FOXR1-201ENST00000317011 CWF19L2Q2TBE0 894 aaKnown RBP19.95■□□□□ 0.78
FOXR1-201ENST00000317011 DEFB115Q30KQ5 88 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms