RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PKP1Q13835 747 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 DBNDD2Q9BQY9 259 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 KDRP35968 1356 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 PES1O00541 588 aaKnown RBP15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 XBP1P17861 261 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 TRIM22Q8IYM9 498 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 A1BGP04217 495 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 HCLS1P14317 486 aaPredicted RBP15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 PIP4K2BP78356 416 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 RAI14Q9P0K7 980 aa15.76■□□□□ 0.11
PCDHB9-201ENST00000316105 CD163L1Q9NR16 1453 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 NEURL1BA8MQ27 555 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 JMYQ8N9B5 988 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 STAP2Q9UGK3 403 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 CDKL5O76039 1030 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 TIMM10P62072 90 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 MEX3CQ5U5Q3 659 aaKnown RBP15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 GIMAP6Q6P9H5 292 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 Q6ZUG5 572 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 GOLGA8BA8MQT2 603 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
PCDHB9-201ENST00000316105 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 RAB11FIP4Q86YS3 637 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 C8orf76Q96K31 380 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 NAPBQ9H115 298 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 SMC2O95347 1197 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 ATP2B3Q16720 1220 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 OLFM4Q6UX06 510 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 EAF2Q96CJ1 260 aaPredicted RBP15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 ZMYND15Q9H091 742 aa15.74■□□□□ 0.11
PCDHB9-201ENST00000316105 OVOS2A0A0J9YW53 1432 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 OVOS2Q6IE36 1432 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 MAP3K12Q12852 859 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 CCDC129Q6ZRS4 1044 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 BRMS1Q9HCU9 246 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 TPM2P07951 284 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 UBAC1Q9BSL1 405 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 DIP2BQ9P265 1576 aa15.73■□□□□ 0.11
PCDHB9-201ENST00000316105 COL3A1P02461 1466 aaPredicted RBP15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 SLC5A1P13866 664 aa15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 EDC3Q96F86 508 aaKnown RBP15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 MARCH6O60337 910 aa15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 LMBRD1Q9NUN5 540 aa15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 TMEM94Q12767 1356 aa15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 ERBB3P21860 1342 aa15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 SLC27A2O14975 620 aa15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 HOMER1Q86YM7 354 aa15.72■□□□□ 0.11
PCDHB9-201ENST00000316105 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 CEP57L1Q8IYX8 460 aa15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 FAM89AQ96GI7 184 aa15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 ZNF652Q9Y2D9 606 aa15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 SSH2Q76I76 1423 aa15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 ZNF594Q96JF6 807 aaPredicted RBP15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 DDX19AQ9NUU7 478 aaKnown RBP15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 USP32Q8NFA0 1604 aa15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 SPATA31D1Q6ZQQ2 1576 aa15.71■□□□□ 0.11
PCDHB9-201ENST00000316105 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 RAD21O60216 631 aa15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 CHST3Q7LGC8 479 aa15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 CHAMP1Q96JM3 812 aa15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 ZFYP08048 801 aaPredicted RBP15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 PTH1RQ03431 593 aa15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 CRB1P82279 1406 aa15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 EYA2O00167 538 aa15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 TTF1Q15361 905 aaPredicted RBP15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 ORC3Q9UBD5 711 aaPredicted RBP15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 MAP2P11137 1827 aaKnown RBP15.7■□□□□ 0.1
PCDHB9-201ENST00000316105 RRP9O43818 475 aaKnown RBP15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 ADCY5O95622 1261 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 CCDC82Q8N4S0 544 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 NCOA7Q8NI08 942 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 A0A1B0GUL7 405 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 EPB41L2O43491 1005 aaKnown RBP15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 BRD1O95696 1058 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 TECPR2O15040 1411 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 RNF113AO15541 343 aaKnown RBP15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 RBM10P98175 930 aaKnown RBP15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 CCDC191Q8NCU4 936 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 BTG4Q9NY30 223 aa15.69■□□□□ 0.1
PCDHB9-201ENST00000316105 KLF18A0A0U1RQI7 1052 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 MCM5P33992 734 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 CLCN1P35523 988 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 ACSBG1Q96GR2 724 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 RBSNQ9H1K0 784 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 TPM1P09493 284 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 MICU3Q86XE3 530 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 FSIP1Q8NA03 581 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 POLR3DP05423 398 aaPredicted RBP15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 RPS6KB1P23443 525 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 SLC9C2Q5TAH2 1124 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 CCDC144CPQ8IYA2 1237 aa15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 ZSCAN16Q9H4T2 348 aaPredicted RBP15.68■□□□□ 0.1
PCDHB9-201ENST00000316105 IFIT3O14879 490 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms