RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 DRC1Q96MC2 740 aa6.28□□□□□ -1.4
SMCO3-201ENST00000316048 CRISPLD1Q9H336 500 aa6.28□□□□□ -1.4
SMCO3-201ENST00000316048 METTL5Q9NRN9 209 aaKnown RBP6.28□□□□□ -1.4
SMCO3-201ENST00000316048 GJA3Q9Y6H8 435 aa6.28□□□□□ -1.4
SMCO3-201ENST00000316048 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
SMCO3-201ENST00000316048 AVPP01185 164 aa6.28□□□□□ -1.4
SMCO3-201ENST00000316048 RACK1P63244 317 aaKnown RBP6.28□□□□□ -1.4
SMCO3-201ENST00000316048 FNDC3AQ9Y2H6 1198 aaKnown RBP6.28□□□□□ -1.4
SMCO3-201ENST00000316048 NEFLP07196 543 aa6.27□□□□□ -1.41
SMCO3-201ENST00000316048 USP17L7P0C7H9 530 aa6.27□□□□□ -1.41
SMCO3-201ENST00000316048 SCARF1Q14162 830 aa6.27□□□□□ -1.41
SMCO3-201ENST00000316048 CAPN10Q9HC96 672 aa6.27□□□□□ -1.41
SMCO3-201ENST00000316048 NLRP2Q9NX02 1062 aa6.27□□□□□ -1.41
SMCO3-201ENST00000316048 DCDC2BA2VCK2 349 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 SASH3O75995 380 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 SFSWAPQ12872 951 aaKnown RBP6.26□□□□□ -1.41
SMCO3-201ENST00000316048 BCO2Q9BYV7 579 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 TGIF2Q9GZN2 237 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 ABI2Q9NYB9 513 aaPredicted RBP6.26□□□□□ -1.41
SMCO3-201ENST00000316048 F11P03951 625 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 TARSP26639 723 aaKnown RBP6.26□□□□□ -1.41
SMCO3-201ENST00000316048 GRM2Q14416 872 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 CCSER2Q9H7U1 834 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 STRN4Q9NRL3 753 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 DYRK1BQ9Y463 629 aa6.26□□□□□ -1.41
SMCO3-201ENST00000316048 GADD45BO75293 160 aaPredicted RBP6.25□□□□□ -1.41
SMCO3-201ENST00000316048 EPB42P16452 691 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.25□□□□□ -1.41
SMCO3-201ENST00000316048 F6X3S4 739 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 ST8SIA5O15466 376 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 ACPPP15309 386 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 PEAR1Q5VY43 1037 aaPredicted RBP6.25□□□□□ -1.41
SMCO3-201ENST00000316048 RAB44Q7Z6P3 723 aaPredicted RBP6.25□□□□□ -1.41
SMCO3-201ENST00000316048 NLRP13Q86W25 1043 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 GALNT12Q8IXK2 581 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 PGBD3Q8N328 593 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 ZFATQ9P243 1243 aa6.25□□□□□ -1.41
SMCO3-201ENST00000316048 DDX41Q9UJV9 622 aaKnown RBP6.25□□□□□ -1.41
SMCO3-201ENST00000316048 MMP20O60882 483 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 EGFRP00533 1210 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 UBAP2LQ14157 1087 aaKnown RBP6.24□□□□□ -1.41
SMCO3-201ENST00000316048 RIPOR1Q6ZS17 1223 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 GLIS3Q8NEA6 775 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 FRMD6Q96NE9 622 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 FAM8A1Q9UBU6 413 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 DACH1Q9UI36 760 aa6.24□□□□□ -1.41
SMCO3-201ENST00000316048 EFSO43281 561 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 CES1P23141 567 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 VEGFBP49765 207 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 SAMD5Q5TGI4 173 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 SRA1Q9HD15 236 aaKnown RBP6.23□□□□□ -1.41
SMCO3-201ENST00000316048 CUEDC1Q9NWM3 386 aaPredicted RBP6.23□□□□□ -1.41
SMCO3-201ENST00000316048 GGT7Q9UJ14 662 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 USP31Q70CQ4 1352 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 KHNYNO15037 678 aaKnown RBP6.23□□□□□ -1.41
SMCO3-201ENST00000316048 ITGAEP38570 1179 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 COL13A1Q5TAT6 717 aaPredicted RBP6.23□□□□□ -1.41
SMCO3-201ENST00000316048 NLRP8Q86W28 1048 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 TANGO6Q9C0B7 1094 aa6.23□□□□□ -1.41
SMCO3-201ENST00000316048 AXIN1O15169 862 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 MAN1A2O60476 641 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 TRPA1O75762 1119 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 TAF1CQ15572 869 aaPredicted RBP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 HS2ST1Q7LGA3 356 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 C3orf58Q8NDZ4 430 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 TRIM56Q9BRZ2 755 aaKnown RBP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 GSX2Q9BZM3 304 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 SUV39H2Q9H5I1 410 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 KCNH4Q9UQ05 1017 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 A0A1W2PP55 124 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 ATXN7O15265 892 aaPredicted RBP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 FBXO24O75426 580 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 DNAJA1P31689 397 aaKnown RBP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 PTPN12Q05209 780 aaKnown RBP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 SF3A1Q15459 793 aaKnown RBP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 EFHC2Q5JST6 749 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
SMCO3-201ENST00000316048 UBXN4Q92575 508 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 PRKAG2Q9UGJ0 569 aa6.22□□□□□ -1.41
SMCO3-201ENST00000316048 FAM157BP0CG42 384 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 RARAP10276 462 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
SMCO3-201ENST00000316048 KCNQ4P56696 695 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 PTSQ03393 145 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 PKDCCQ504Y2 493 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 DHX38Q92620 1227 aaKnown RBP6.21□□□□□ -1.42
SMCO3-201ENST00000316048 CNTNAP3BQ96NU0 1288 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
SMCO3-201ENST00000316048 CNTNAP3Q9BZ76 1288 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 SALL4Q9UJQ4 1053 aa6.21□□□□□ -1.42
SMCO3-201ENST00000316048 ZCCHC6Q5VYS8 1495 aaKnown RBP6.21□□□□□ -1.42
SMCO3-201ENST00000316048 BNIP3LO60238 219 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 MAPTP10636 758 aaKnown RBP6.2□□□□□ -1.42
SMCO3-201ENST00000316048 NFKB1P19838 968 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 FCGRTP55899 365 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 OR13H1Q8NG92 308 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 ABHD17AQ96GS6 310 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 283.5 ms