RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CEP126Q9P2H0 1117 aa20.36■□□□□ 0.85
CLCF1-201ENST00000312438 DBNLQ9UJU6 430 aaKnown RBP20.36■□□□□ 0.85
CLCF1-201ENST00000312438 ANKRD18BA2A2Z9 1011 aa20.35■□□□□ 0.85
CLCF1-201ENST00000312438 ZNF772Q68DY9 489 aaPredicted RBP20.35■□□□□ 0.85
CLCF1-201ENST00000312438 KRT27Q7Z3Y8 459 aa20.35■□□□□ 0.85
CLCF1-201ENST00000312438 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
CLCF1-201ENST00000312438 TBC1D2Q9BYX2 928 aa20.35■□□□□ 0.85
CLCF1-201ENST00000312438 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
CLCF1-201ENST00000312438 NHSQ6T4R5 1651 aa20.35■□□□□ 0.85
CLCF1-201ENST00000312438 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
CLCF1-201ENST00000312438 ITGA6P23229 1130 aa20.34■□□□□ 0.85
CLCF1-201ENST00000312438 BOLA2Q9H3K6 86 aa20.34■□□□□ 0.85
CLCF1-201ENST00000312438 GREM2Q9H772 168 aa20.34■□□□□ 0.85
CLCF1-201ENST00000312438 SNX21Q969T3 373 aa20.33■□□□□ 0.85
CLCF1-201ENST00000312438 DBNDD2Q9BQY9 259 aa20.33■□□□□ 0.85
CLCF1-201ENST00000312438 AKAP2Q9Y2D5 859 aa20.33■□□□□ 0.85
CLCF1-201ENST00000312438 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.85
CLCF1-201ENST00000312438 RUFY2Q8WXA3 655 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 NEUROD6Q96NK8 337 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 NARFQ9UHQ1 456 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
CLCF1-201ENST00000312438 FAM177BA6PVY3 158 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 HIP1O00291 1037 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 GNPATO15228 680 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 NTSR2O95665 410 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 TIMM10P62072 90 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 RBM6P78332 1123 aaKnown RBP20.32■□□□□ 0.84
CLCF1-201ENST00000312438 LDHAL6AQ6ZMR3 332 aa20.32■□□□□ 0.84
CLCF1-201ENST00000312438 SGSM2O43147 1006 aa20.31■□□□□ 0.84
CLCF1-201ENST00000312438 COL5A3P25940 1745 aaPredicted RBP20.31■□□□□ 0.84
CLCF1-201ENST00000312438 NUP98P52948 1817 aa20.31■□□□□ 0.84
CLCF1-201ENST00000312438 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
CLCF1-201ENST00000312438 RIPOR2Q9Y4F9 1068 aa20.31■□□□□ 0.84
CLCF1-201ENST00000312438 HCLS1P14317 486 aaPredicted RBP20.3■□□□□ 0.84
CLCF1-201ENST00000312438 ANO2Q9NQ90 1003 aa20.3■□□□□ 0.84
CLCF1-201ENST00000312438 A0A1B0GUL7 405 aa20.3■□□□□ 0.84
CLCF1-201ENST00000312438 ZPR1O75312 459 aa20.3■□□□□ 0.84
CLCF1-201ENST00000312438 MCCP23508 829 aa20.3■□□□□ 0.84
CLCF1-201ENST00000312438 RABEP1Q15276 862 aa20.3■□□□□ 0.84
CLCF1-201ENST00000312438 HSCBQ8IWL3 235 aa20.3■□□□□ 0.84
CLCF1-201ENST00000312438 BTAF1O14981 1849 aa20.29■□□□□ 0.84
CLCF1-201ENST00000312438 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
CLCF1-201ENST00000312438 TUBGCP6Q96RT7 1819 aa20.29■□□□□ 0.84
CLCF1-201ENST00000312438 USPL1Q5W0Q7 1092 aa20.29■□□□□ 0.84
CLCF1-201ENST00000312438 CWC27Q6UX04 472 aaKnown RBP20.29■□□□□ 0.84
CLCF1-201ENST00000312438 HAUS7Q99871 368 aa20.28■□□□□ 0.84
CLCF1-201ENST00000312438 BCL2L12Q9HB09 334 aa20.28■□□□□ 0.84
CLCF1-201ENST00000312438 CNNM1Q9NRU3 951 aa20.28■□□□□ 0.84
CLCF1-201ENST00000312438 CCDC152Q4G0S7 254 aa20.27■□□□□ 0.84
CLCF1-201ENST00000312438 KIAA1211Q6ZU35 1233 aa20.27■□□□□ 0.84
CLCF1-201ENST00000312438 ARHGEF1Q92888 912 aaKnown RBP20.27■□□□□ 0.84
CLCF1-201ENST00000312438 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
CLCF1-201ENST00000312438 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
CLCF1-201ENST00000312438 SLC27A3Q5K4L6 730 aa20.27■□□□□ 0.84
CLCF1-201ENST00000312438 TRAPPC3LQ5T215 181 aa20.27■□□□□ 0.84
CLCF1-201ENST00000312438 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
CLCF1-201ENST00000312438 IL25Q9H293 177 aa20.27■□□□□ 0.84
CLCF1-201ENST00000312438 SMIM5Q71RC9 77 aa20.26■□□□□ 0.83
CLCF1-201ENST00000312438 TRIM37O94972 964 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 ANAPC15P60006 121 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLCF1-201ENST00000312438 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 LRRC4BQ9NT99 713 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 ZNF609O15014 1411 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 TICAM2Q86XR7 235 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 NYXQ9GZU5 481 aa20.25■□□□□ 0.83
CLCF1-201ENST00000312438 SRP68Q9UHB9 627 aaKnown RBP20.25■□□□□ 0.83
CLCF1-201ENST00000312438 RFC4P35249 363 aa20.24■□□□□ 0.83
CLCF1-201ENST00000312438 SLC10A5Q5PT55 438 aa20.24■□□□□ 0.83
CLCF1-201ENST00000312438 GORABQ5T7V8 394 aa20.24■□□□□ 0.83
CLCF1-201ENST00000312438 BICDL1Q6ZP65 573 aa20.24■□□□□ 0.83
CLCF1-201ENST00000312438 XAGE2Q96GT9 111 aa20.24■□□□□ 0.83
CLCF1-201ENST00000312438 RTL9Q8NET4 1388 aa20.24■□□□□ 0.83
CLCF1-201ENST00000312438 MROH5Q6ZUA9 1318 aa20.24■□□□□ 0.83
CLCF1-201ENST00000312438 PDE8BO95263 885 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 ADRA2BP18089 450 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
CLCF1-201ENST00000312438 DNAJC2Q99543 621 aaKnown RBP20.23■□□□□ 0.83
CLCF1-201ENST00000312438 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 ANP32EQ9BTT0 268 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
CLCF1-201ENST00000312438 HSPA4P34932 840 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 ATP2B3Q16720 1220 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 ERFEQ4G0M1 354 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
CLCF1-201ENST00000312438 RAD50Q92878 1312 aa20.22■□□□□ 0.83
CLCF1-201ENST00000312438 IFIT1P09914 478 aaKnown RBP20.22■□□□□ 0.83
CLCF1-201ENST00000312438 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
CLCF1-201ENST00000312438 AMIGO3Q86WK7 504 aa20.22■□□□□ 0.83
CLCF1-201ENST00000312438 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
CLCF1-201ENST00000312438 EDC3Q96F86 508 aaKnown RBP20.22■□□□□ 0.83
CLCF1-201ENST00000312438 SNRKQ9NRH2 765 aa20.22■□□□□ 0.83
CLCF1-201ENST00000312438 SBF2Q86WG5 1849 aa20.21■□□□□ 0.83
CLCF1-201ENST00000312438 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
CLCF1-201ENST00000312438 NMIQ13287 307 aaPredicted RBP20.21■□□□□ 0.83
CLCF1-201ENST00000312438 TPTE2Q6XPS3 522 aa20.21■□□□□ 0.83
CLCF1-201ENST00000312438 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
CLCF1-201ENST00000312438 SEC31BQ9NQW1 1179 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms