RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ZNF445P59923 1031 aa15.08■□□□□ 0
SNED1-201ENST00000310397 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
SNED1-201ENST00000310397 LRRC27Q9C0I9 530 aa15.08■□□□□ 0
SNED1-201ENST00000310397 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
SNED1-201ENST00000310397 MRPL50Q8N5N7 158 aaKnown RBP15.08■□□□□ 0
SNED1-201ENST00000310397 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
SNED1-201ENST00000310397 RBM8AQ9Y5S9 174 aaKnown RBP15.08■□□□□ 0
SNED1-201ENST00000310397 OPA1O60313 960 aa15.08■□□□□ 0
SNED1-201ENST00000310397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.08■□□□□ 0
SNED1-201ENST00000310397 ANKRD24Q8TF21 1146 aa15.07■□□□□ 0
SNED1-201ENST00000310397 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
SNED1-201ENST00000310397 SETD1BQ9UPS6 1966 aaKnown RBP15.07■□□□□ 0
SNED1-201ENST00000310397 USP5P45974 858 aa15.07■□□□□ 0
SNED1-201ENST00000310397 MICU3Q86XE3 530 aa15.07■□□□□ 0
SNED1-201ENST00000310397 PUS7Q96PZ0 661 aaKnown RBP15.07■□□□□ 0
SNED1-201ENST00000310397 DNAJC25Q9H1X3 360 aa15.07■□□□□ 0
SNED1-201ENST00000310397 RAPGEF3O95398 923 aa15.07■□□□□ 0
SNED1-201ENST00000310397 HSPA4P34932 840 aa15.07■□□□□ 0
SNED1-201ENST00000310397 GTF2A1P52655 376 aaPredicted RBP15.07■□□□□ 0
SNED1-201ENST00000310397 TNIP1Q15025 636 aa15.07■□□□□ 0
SNED1-201ENST00000310397 DDX12PQ92771 950 aa15.07■□□□□ 0
SNED1-201ENST00000310397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.07■□□□□ 0
SNED1-201ENST00000310397 RANBP6O60518 1105 aaKnown RBP15.07■□□□□ 0
SNED1-201ENST00000310397 AOPEPQ8N6M6 819 aa15.07■□□□□ 0
SNED1-201ENST00000310397 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
SNED1-201ENST00000310397 PTPRKQ15262 1439 aa15.07■□□□□ 0
SNED1-201ENST00000310397 RNF123Q5XPI4 1314 aa15.06■□□□□ 0
SNED1-201ENST00000310397 MFSD6Q6ZSS7 791 aa15.06■□□□□ 0
SNED1-201ENST00000310397 ANKLE2Q86XL3 938 aa15.06■□□□□ 0
SNED1-201ENST00000310397 SSR1P43307 286 aaKnown RBP15.06■□□□□ 0
SNED1-201ENST00000310397 ZMYM3Q14202 1370 aa15.06■□□□□ 0
SNED1-201ENST00000310397 NECAB1Q8N987 351 aa15.06■□□□□ 0
SNED1-201ENST00000310397 RTL1A6NKG5 1358 aa15.06■□□□□ 0
SNED1-201ENST00000310397 ZFYVE9O95405 1425 aa15.06■□□□□ 0
SNED1-201ENST00000310397 ZSWIM4Q9H7M6 989 aa15.06■□□□□ 0
SNED1-201ENST00000310397 CAPN2P17655 700 aa15.06■□□□□ 0
SNED1-201ENST00000310397 ATP8B2P98198 1209 aa15.06■□□□□ 0
SNED1-201ENST00000310397 MAATS1Q7Z4T9 603 aa15.06■□□□□ 0
SNED1-201ENST00000310397 PLEKHM2Q8IWE5 1019 aa15.06■□□□□ 0
SNED1-201ENST00000310397 MCMDC2Q4G0Z9 681 aa15.06■□□□□ 0
SNED1-201ENST00000310397 ISM2Q6H9L7 571 aa15.06■□□□□ 0
SNED1-201ENST00000310397 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
SNED1-201ENST00000310397 TMX1Q9H3N1 280 aa15.06■□□□□ 0
SNED1-201ENST00000310397 USP26Q9BXU7 913 aa15.06■□□□□ 0
SNED1-201ENST00000310397 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ 0
SNED1-201ENST00000310397 HOOK3Q86VS8 718 aa15.05■□□□□ 0
SNED1-201ENST00000310397 COL17A1Q9UMD9 1497 aaPredicted RBP15.05■□□□□ 0
SNED1-201ENST00000310397 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
SNED1-201ENST00000310397 PLVAPQ9BX97 442 aa15.05■□□□□ -0
SNED1-201ENST00000310397 CCDC172P0C7W6 258 aa15.05■□□□□ -0
SNED1-201ENST00000310397 ANKS4BQ8N8V4 417 aa15.05■□□□□ -0
SNED1-201ENST00000310397 GPATCH11Q8N954 259 aa15.05■□□□□ -0
SNED1-201ENST00000310397 CWC25Q9NXE8 425 aaPredicted RBP15.05■□□□□ -0
SNED1-201ENST00000310397 KDM2BQ8NHM5 1336 aa15.05■□□□□ -0
SNED1-201ENST00000310397 ANKRD18BA2A2Z9 1011 aa15.04■□□□□ -0
SNED1-201ENST00000310397 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
SNED1-201ENST00000310397 BRF1Q92994 677 aa15.04■□□□□ -0
SNED1-201ENST00000310397 CCDC85AQ96PX6 553 aaPredicted RBP15.04■□□□□ -0
SNED1-201ENST00000310397 EBAG9O00559 213 aa15.04■□□□□ -0
SNED1-201ENST00000310397 KRT86O43790 486 aa15.04■□□□□ -0
SNED1-201ENST00000310397 NOP2P46087 812 aaKnown RBP15.04■□□□□ -0
SNED1-201ENST00000310397 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
SNED1-201ENST00000310397 CNNM2Q9H8M5 875 aa15.04■□□□□ -0
SNED1-201ENST00000310397 SEC24BO95487 1268 aa15.04■□□□□ -0
SNED1-201ENST00000310397 KRT83P78385 493 aa15.04■□□□□ -0
SNED1-201ENST00000310397 NPC1L1Q9UHC9 1359 aa15.04■□□□□ -0
SNED1-201ENST00000310397 PTGS1P23219 599 aa15.04■□□□□ -0
SNED1-201ENST00000310397 TMCO5BA8MYB1 307 aa15.04■□□□□ -0
SNED1-201ENST00000310397 ZBTB43O43298 467 aa15.04■□□□□ -0
SNED1-201ENST00000310397 RLBP1P12271 317 aa15.04■□□□□ -0
SNED1-201ENST00000310397 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
SNED1-201ENST00000310397 KRT23Q9C075 422 aa15.04■□□□□ -0
SNED1-201ENST00000310397 SOS1Q07889 1333 aaPredicted RBP15.04■□□□□ -0
SNED1-201ENST00000310397 AKR1B10O60218 316 aa15.03■□□□□ -0
SNED1-201ENST00000310397 CCDC96Q2M329 555 aa15.03■□□□□ -0
SNED1-201ENST00000310397 TRIM47Q96LD4 638 aa15.03■□□□□ -0
SNED1-201ENST00000310397 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
SNED1-201ENST00000310397 MYRIPQ8NFW9 859 aa15.03■□□□□ -0
SNED1-201ENST00000310397 ERO1AQ96HE7 468 aa15.03■□□□□ -0
SNED1-201ENST00000310397 SPTLC2O15270 562 aa15.03■□□□□ -0
SNED1-201ENST00000310397 UBE3BQ7Z3V4 1068 aa15.03■□□□□ -0
SNED1-201ENST00000310397 BRAPQ7Z569 592 aa15.03■□□□□ -0
SNED1-201ENST00000310397 ALG1Q9BT22 464 aa15.03■□□□□ -0
SNED1-201ENST00000310397 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
SNED1-201ENST00000310397 EXOC1Q9NV70 894 aa15.03■□□□□ -0
SNED1-201ENST00000310397 FAM83GA6ND36 823 aa15.03■□□□□ -0
SNED1-201ENST00000310397 FANCAO15360 1455 aa15.03■□□□□ -0
SNED1-201ENST00000310397 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
SNED1-201ENST00000310397 Q6ZUG5 572 aa15.03■□□□□ -0
SNED1-201ENST00000310397 NSRP1Q9H0G5 558 aaKnown RBP15.03■□□□□ -0
SNED1-201ENST00000310397 DNA2P51530 1060 aa15.03■□□□□ -0
SNED1-201ENST00000310397 CEP85Q6P2H3 762 aa15.03■□□□□ -0
SNED1-201ENST00000310397 STXBP4Q6ZWJ1 553 aa15.03■□□□□ -0
SNED1-201ENST00000310397 DZIP1Q86YF9 867 aaKnown RBP15.03■□□□□ -0
SNED1-201ENST00000310397 DNAI2Q9GZS0 605 aa15.03■□□□□ -0
SNED1-201ENST00000310397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.03■□□□□ -0
SNED1-201ENST00000310397 CD109Q6YHK3 1445 aa15.02■□□□□ -0
SNED1-201ENST00000310397 AK2P54819 239 aa15.02■□□□□ -0
SNED1-201ENST00000310397 PDE4BQ07343 736 aa15.02■□□□□ -0
SNED1-201ENST00000310397 KLF18A0A0U1RQI7 1052 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms