RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 QTRT2Q9H974 415 aaKnown RBP28.72■■■□□ 2.19
SNCB-201ENST00000310112 TAF7LQ5H9L4 462 aa28.7■■■□□ 2.18
SNCB-201ENST00000310112 TTLL11Q8NHH1 800 aa28.7■■■□□ 2.18
SNCB-201ENST00000310112 UTP14AQ9BVJ6 771 aaKnown RBP28.7■■■□□ 2.18
SNCB-201ENST00000310112 AKAP2Q9Y2D5 859 aa28.7■■■□□ 2.18
SNCB-201ENST00000310112 LY75O60449 1722 aa28.7■■■□□ 2.18
SNCB-201ENST00000310112 UBN2Q6ZU65 1347 aa28.7■■■□□ 2.18
SNCB-201ENST00000310112 SH3TC1Q8TE82 1336 aa28.7■■■□□ 2.18
SNCB-201ENST00000310112 HMGB2P26583 209 aaKnown RBP28.69■■■□□ 2.18
SNCB-201ENST00000310112 CEP126Q9P2H0 1117 aa28.69■■■□□ 2.18
SNCB-201ENST00000310112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.69■■■□□ 2.18
SNCB-201ENST00000310112 RFX7Q2KHR2 1363 aa28.68■■■□□ 2.18
SNCB-201ENST00000310112 SLC4A3P48751 1232 aa28.68■■■□□ 2.18
SNCB-201ENST00000310112 DBNLQ9UJU6 430 aaKnown RBP28.68■■■□□ 2.18
SNCB-201ENST00000310112 ANKRD18BA2A2Z9 1011 aa28.67■■■□□ 2.18
SNCB-201ENST00000310112 SGSM2O43147 1006 aa28.67■■■□□ 2.18
SNCB-201ENST00000310112 RPS6KA4O75676 772 aa28.67■■■□□ 2.18
SNCB-201ENST00000310112 ANAPC15P60006 121 aa28.67■■■□□ 2.18
SNCB-201ENST00000310112 IL17RAQ96F46 866 aa28.66■■■□□ 2.18
SNCB-201ENST00000310112 BCL11BQ9C0K0 894 aaPredicted RBP28.66■■■□□ 2.18
SNCB-201ENST00000310112 DIAPH3Q9NSV4 1193 aa28.66■■■□□ 2.18
SNCB-201ENST00000310112 TLR7Q9NYK1 1049 aaKnown RBP28.66■■■□□ 2.18
SNCB-201ENST00000310112 ZNF609O15014 1411 aa28.66■■■□□ 2.18
SNCB-201ENST00000310112 MAP4K4O95819 1239 aaPredicted RBP28.65■■■□□ 2.18
SNCB-201ENST00000310112 CCNL1Q9UK58 526 aaPredicted RBP28.65■■■□□ 2.18
SNCB-201ENST00000310112 RAD50Q92878 1312 aa28.65■■■□□ 2.18
SNCB-201ENST00000310112 SUSD4Q5VX71 490 aa28.64■■■□□ 2.18
SNCB-201ENST00000310112 LAMB2P55268 1798 aa28.64■■■□□ 2.18
SNCB-201ENST00000310112 LRRC24Q50LG9 513 aa28.63■■■□□ 2.17
SNCB-201ENST00000310112 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.63■■■□□ 2.17
SNCB-201ENST00000310112 ANO2Q9NQ90 1003 aa28.63■■■□□ 2.17
SNCB-201ENST00000310112 NIP7Q9Y221 180 aaKnown RBP eCLIP28.63■■■□□ 2.17
SNCB-201ENST00000310112 RTL9Q8NET4 1388 aa28.63■■■□□ 2.17
SNCB-201ENST00000310112 SCN7AQ01118 1682 aa28.63■■■□□ 2.17
SNCB-201ENST00000310112 ITGA6P23229 1130 aa28.62■■■□□ 2.17
SNCB-201ENST00000310112 FAM196AQ6ZSG2 479 aa28.62■■■□□ 2.17
SNCB-201ENST00000310112 KIAA1211Q6ZU35 1233 aa28.62■■■□□ 2.17
SNCB-201ENST00000310112 ZNF594Q96JF6 807 aaPredicted RBP28.62■■■□□ 2.17
SNCB-201ENST00000310112 BOLA2Q9H3K6 86 aa28.62■■■□□ 2.17
SNCB-201ENST00000310112 HAUS7Q99871 368 aa28.62■■■□□ 2.17
SNCB-201ENST00000310112 DBNDD2Q9BQY9 259 aa28.62■■■□□ 2.17
SNCB-201ENST00000310112 NTSR2O95665 410 aa28.61■■■□□ 2.17
SNCB-201ENST00000310112 NARFQ9UHQ1 456 aa28.61■■■□□ 2.17
SNCB-201ENST00000310112 TAF1LQ8IZX4 1826 aa28.6■■■□□ 2.17
SNCB-201ENST00000310112 PTF1AQ7RTS3 328 aa28.6■■■□□ 2.17
SNCB-201ENST00000310112 SYNE4Q8N205 404 aa28.6■■■□□ 2.17
SNCB-201ENST00000310112 GREM2Q9H772 168 aa28.6■■■□□ 2.17
SNCB-201ENST00000310112 SNRKQ9NRH2 765 aa28.6■■■□□ 2.17
SNCB-201ENST00000310112 ABCC12Q96J65 1359 aa28.59■■■□□ 2.17
SNCB-201ENST00000310112 SPEF2Q9C093 1822 aa28.59■■■□□ 2.17
SNCB-201ENST00000310112 ZNF772Q68DY9 489 aaPredicted RBP28.59■■■□□ 2.17
SNCB-201ENST00000310112 LDHAL6AQ6ZMR3 332 aa28.59■■■□□ 2.17
SNCB-201ENST00000310112 PUS3Q9BZE2 481 aaKnown RBP28.59■■■□□ 2.17
SNCB-201ENST00000310112 RTCBQ9Y3I0 505 aaKnown RBP28.59■■■□□ 2.17
SNCB-201ENST00000310112 RIPOR2Q9Y4F9 1068 aa28.59■■■□□ 2.17
SNCB-201ENST00000310112 LRP5O75197 1615 aa28.59■■■□□ 2.17
SNCB-201ENST00000310112 A0A1B0GUL7 405 aa28.58■■■□□ 2.17
SNCB-201ENST00000310112 ST18O60284 1047 aa28.58■■■□□ 2.17
SNCB-201ENST00000310112 CCDC152Q4G0S7 254 aa28.58■■■□□ 2.17
SNCB-201ENST00000310112 NEUROD6Q96NK8 337 aa28.58■■■□□ 2.17
SNCB-201ENST00000310112 KRT27Q7Z3Y8 459 aa28.57■■■□□ 2.16
SNCB-201ENST00000310112 FSD1Q9BTV5 496 aa28.57■■■□□ 2.16
SNCB-201ENST00000310112 K7ELQ4 463 aaPredicted RBP28.56■■■□□ 2.16
SNCB-201ENST00000310112 CWC27Q6UX04 472 aaKnown RBP28.56■■■□□ 2.16
SNCB-201ENST00000310112 DDX60Q8IY21 1712 aaKnown RBP28.55■■■□□ 2.16
SNCB-201ENST00000310112 HSPA4P34932 840 aa28.55■■■□□ 2.16
SNCB-201ENST00000310112 CCDC158Q5M9N0 1113 aa28.55■■■□□ 2.16
SNCB-201ENST00000310112 FAM182BQ5T319 152 aa28.55■■■□□ 2.16
SNCB-201ENST00000310112 NYXQ9GZU5 481 aa28.55■■■□□ 2.16
SNCB-201ENST00000310112 LSG1Q9H089 658 aaKnown RBP28.55■■■□□ 2.16
SNCB-201ENST00000310112 CNNM1Q9NRU3 951 aa28.55■■■□□ 2.16
SNCB-201ENST00000310112 MROH5Q6ZUA9 1318 aa28.54■■■□□ 2.16
SNCB-201ENST00000310112 ZPR1O75312 459 aa28.54■■■□□ 2.16
SNCB-201ENST00000310112 ADRA2BP18089 450 aa28.54■■■□□ 2.16
SNCB-201ENST00000310112 TIMM10P62072 90 aa28.54■■■□□ 2.16
SNCB-201ENST00000310112 METTL24Q5JXM2 366 aa28.54■■■□□ 2.16
SNCB-201ENST00000310112 SLC27A3Q5K4L6 730 aa28.54■■■□□ 2.16
SNCB-201ENST00000310112 C4BP0C0L5 1744 aa28.54■■■□□ 2.16
SNCB-201ENST00000310112 GNPATO15228 680 aa28.53■■■□□ 2.16
SNCB-201ENST00000310112 MCM2P49736 904 aa28.53■■■□□ 2.16
SNCB-201ENST00000310112 RBM6P78332 1123 aaKnown RBP28.53■■■□□ 2.16
SNCB-201ENST00000310112 RIC1Q4ADV7 1423 aa28.53■■■□□ 2.16
SNCB-201ENST00000310112 CCDC85AQ96PX6 553 aaPredicted RBP28.52■■■□□ 2.16
SNCB-201ENST00000310112 LRRFIP1Q32MZ4 808 aaKnown RBP28.51■■■□□ 2.16
SNCB-201ENST00000310112 SLC10A5Q5PT55 438 aa28.51■■■□□ 2.16
SNCB-201ENST00000310112 ANTXR1Q9H6X2 564 aa28.51■■■□□ 2.16
SNCB-201ENST00000310112 HCLS1P14317 486 aaPredicted RBP28.5■■■□□ 2.15
SNCB-201ENST00000310112 ATP2B3Q16720 1220 aa28.5■■■□□ 2.15
SNCB-201ENST00000310112 GORABQ5T7V8 394 aa28.5■■■□□ 2.15
SNCB-201ENST00000310112 KBTBD3Q8NAB2 608 aa28.5■■■□□ 2.15
SNCB-201ENST00000310112 ZNF512BQ96KM6 892 aaPredicted RBP28.5■■■□□ 2.15
SNCB-201ENST00000310112 BRWD3Q6RI45 1802 aa28.5■■■□□ 2.15
SNCB-201ENST00000310112 COL24A1Q17RW2 1714 aa28.5■■■□□ 2.15
SNCB-201ENST00000310112 IFIT1P09914 478 aaKnown RBP28.5■■■□□ 2.15
SNCB-201ENST00000310112 NMIQ13287 307 aaPredicted RBP28.5■■■□□ 2.15
SNCB-201ENST00000310112 IL25Q9H293 177 aa28.5■■■□□ 2.15
SNCB-201ENST00000310112 KCNQ4P56696 695 aa28.49■■■□□ 2.15
SNCB-201ENST00000310112 SF3B3Q15393 1217 aaKnown RBP28.49■■■□□ 2.15
SNCB-201ENST00000310112 VGLL2Q8N8G2 317 aa28.49■■■□□ 2.15
SNCB-201ENST00000310112 XAGE2Q96GT9 111 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms