RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 TTLL11Q8NHH1 800 aa16.2■□□□□ 0.18
APTX-201ENST00000309615 RPGRQ92834 1020 aaKnown RBP16.2■□□□□ 0.18
APTX-201ENST00000309615 ZNF622Q969S3 477 aaKnown RBP eCLIP16.2■□□□□ 0.18
APTX-201ENST00000309615 MASTLQ96GX5 879 aa16.2■□□□□ 0.18
APTX-201ENST00000309615 GNAI3P08754 354 aa16.2■□□□□ 0.18
APTX-201ENST00000309615 NPR1P16066 1061 aa16.2■□□□□ 0.18
APTX-201ENST00000309615 CENPBP07199 599 aaPredicted RBP16.19■□□□□ 0.18
APTX-201ENST00000309615 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
APTX-201ENST00000309615 BICC1Q9H694 974 aaKnown RBP16.19■□□□□ 0.18
APTX-201ENST00000309615 LRRFIP2Q9Y608 721 aaKnown RBP16.19■□□□□ 0.18
APTX-201ENST00000309615 CSF1RP07333 972 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
APTX-201ENST00000309615 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 LMBR1LQ6UX01 489 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
APTX-201ENST00000309615 GREM2Q9H772 168 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 PIM2Q9P1W9 311 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 ANKRD44Q8N8A2 993 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
APTX-201ENST00000309615 DLEC1Q9Y238 1755 aa16.17■□□□□ 0.18
APTX-201ENST00000309615 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
APTX-201ENST00000309615 DDX46Q7L014 1031 aaKnown RBP16.17■□□□□ 0.18
APTX-201ENST00000309615 CHMP3Q9Y3E7 222 aa16.17■□□□□ 0.18
APTX-201ENST00000309615 RABL6Q3YEC7 729 aaPredicted RBP16.16■□□□□ 0.18
APTX-201ENST00000309615 TTLL6Q8N841 843 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 COL4A1P02462 1669 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 GNAI2P04899 355 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 ALDH1B1P30837 517 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
APTX-201ENST00000309615 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 HDAC5Q9UQL6 1122 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 MYH3P11055 1940 aa16.16■□□□□ 0.18
APTX-201ENST00000309615 ITGA6P23229 1130 aa16.15■□□□□ 0.18
APTX-201ENST00000309615 DALRD3Q5D0E6 543 aaKnown RBP16.15■□□□□ 0.18
APTX-201ENST00000309615 CELF1Q92879 486 aaKnown RBP16.15■□□□□ 0.18
APTX-201ENST00000309615 ZBTB40Q9NUA8 1239 aa16.15■□□□□ 0.18
APTX-201ENST00000309615 BCS1LQ9Y276 419 aa16.15■□□□□ 0.18
APTX-201ENST00000309615 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
APTX-201ENST00000309615 BRCA1P38398 1863 aaKnown RBP16.15■□□□□ 0.18
APTX-201ENST00000309615 GRAPQ13588 217 aa16.14■□□□□ 0.17
APTX-201ENST00000309615 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
APTX-201ENST00000309615 IRX6P78412 446 aaPredicted RBP16.14■□□□□ 0.17
APTX-201ENST00000309615 SLC51AQ86UW1 340 aa16.14■□□□□ 0.17
APTX-201ENST00000309615 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
APTX-201ENST00000309615 TAF1P21675 1872 aa16.13■□□□□ 0.17
APTX-201ENST00000309615 IFIT5Q13325 482 aaKnown RBP16.13■□□□□ 0.17
APTX-201ENST00000309615 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
APTX-201ENST00000309615 UTRNP46939 3433 aa16.13■□□□□ 0.17
APTX-201ENST00000309615 SLX4Q8IY92 1834 aa16.12■□□□□ 0.17
APTX-201ENST00000309615 ANKRD18BA2A2Z9 1011 aa16.12■□□□□ 0.17
APTX-201ENST00000309615 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.17
APTX-201ENST00000309615 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
APTX-201ENST00000309615 CCDC57Q2TAC2 916 aa16.12■□□□□ 0.17
APTX-201ENST00000309615 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
APTX-201ENST00000309615 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
APTX-201ENST00000309615 BBOX1O75936 387 aa16.12■□□□□ 0.17
APTX-201ENST00000309615 ZNF594Q96JF6 807 aaPredicted RBP16.12■□□□□ 0.17
APTX-201ENST00000309615 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
APTX-201ENST00000309615 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
APTX-201ENST00000309615 CACNA1SQ13698 1873 aa16.11■□□□□ 0.17
APTX-201ENST00000309615 C21orf2O43822 256 aa16.11■□□□□ 0.17
APTX-201ENST00000309615 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
APTX-201ENST00000309615 C7orf43Q8WVR3 580 aa16.11■□□□□ 0.17
APTX-201ENST00000309615 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
APTX-201ENST00000309615 MTX1Q13505 466 aa16.1■□□□□ 0.17
APTX-201ENST00000309615 GPR162Q16538 588 aa16.1■□□□□ 0.17
APTX-201ENST00000309615 KLHDC4Q8TBB5 520 aa16.1■□□□□ 0.17
APTX-201ENST00000309615 PNMA6EA0A0J9YXQ4 647 aa16.1■□□□□ 0.17
APTX-201ENST00000309615 RFX5P48382 616 aaPredicted RBP16.1■□□□□ 0.17
APTX-201ENST00000309615 EXOC6Q8TAG9 804 aa16.1■□□□□ 0.17
APTX-201ENST00000309615 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
APTX-201ENST00000309615 TAF7LQ5H9L4 462 aa16.09■□□□□ 0.17
APTX-201ENST00000309615 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
APTX-201ENST00000309615 IGHMBP2P38935 993 aaKnown RBP16.08■□□□□ 0.17
APTX-201ENST00000309615 ATP8B2P98198 1209 aa16.08■□□□□ 0.17
APTX-201ENST00000309615 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.17
APTX-201ENST00000309615 PTPN12Q05209 780 aaKnown RBP16.08■□□□□ 0.16
APTX-201ENST00000309615 TMC4Q7Z404 712 aa16.08■□□□□ 0.16
APTX-201ENST00000309615 SP8Q8IXZ3 490 aa16.08■□□□□ 0.16
APTX-201ENST00000309615 MPHOSPH8Q99549 860 aa16.08■□□□□ 0.16
APTX-201ENST00000309615 LDHAL6AQ6ZMR3 332 aa16.07■□□□□ 0.16
APTX-201ENST00000309615 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
APTX-201ENST00000309615 PA2G4Q9UQ80 394 aaKnown RBP16.07■□□□□ 0.16
APTX-201ENST00000309615 SIRT2Q8IXJ6 389 aa16.06■□□□□ 0.16
APTX-201ENST00000309615 SPEF2Q9C093 1822 aa16.06■□□□□ 0.16
APTX-201ENST00000309615 ARFGEF1Q9Y6D6 1849 aa16.06■□□□□ 0.16
APTX-201ENST00000309615 POLA2Q14181 598 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 LRRC24Q50LG9 513 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 CCDC93Q567U6 631 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
APTX-201ENST00000309615 SSH3Q8TE77 659 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 MINPP1Q9UNW1 487 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 SNED1Q8TER0 1413 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 SOGA3Q5TF21 947 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 SIL1Q9H173 461 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms