RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 ZNF428Q96B54 188 aa15.93■□□□□ 0.14
TPT1-201ENST00000309246 DDX21Q9NR30 783 aaKnown RBP eCLIP15.93■□□□□ 0.14
TPT1-201ENST00000309246 RASSF10A6NK89 507 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 CHL1O00533 1208 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 TCIRG1Q13488 830 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 CHPF2Q9P2E5 772 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 TRMT112Q9UI30 125 aaKnown RBP15.92■□□□□ 0.14
TPT1-201ENST00000309246 ABT1Q9ULW3 272 aaKnown RBP15.92■□□□□ 0.14
TPT1-201ENST00000309246 TRIM35Q9UPQ4 493 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 PCNTO95613 3336 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 SH3TC1Q8TE82 1336 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 DUOX1Q9NRD9 1551 aa15.92■□□□□ 0.14
TPT1-201ENST00000309246 THSD7BQ9C0I4 1608 aa15.91■□□□□ 0.14
TPT1-201ENST00000309246 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
TPT1-201ENST00000309246 DEFB115Q30KQ5 88 aa15.91■□□□□ 0.14
TPT1-201ENST00000309246 DPP8Q6V1X1 898 aaPredicted RBP15.91■□□□□ 0.14
TPT1-201ENST00000309246 SUPT20HQ8NEM7 779 aa15.91■□□□□ 0.14
TPT1-201ENST00000309246 AIDAQ96BJ3 306 aa15.91■□□□□ 0.14
TPT1-201ENST00000309246 RUNDC1Q96C34 613 aa15.91■□□□□ 0.14
TPT1-201ENST00000309246 BBOX1O75936 387 aa15.9■□□□□ 0.14
TPT1-201ENST00000309246 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
TPT1-201ENST00000309246 USP50Q70EL3 339 aaPredicted RBP15.9■□□□□ 0.14
TPT1-201ENST00000309246 DDX46Q7L014 1031 aaKnown RBP15.9■□□□□ 0.14
TPT1-201ENST00000309246 SP8Q8IXZ3 490 aa15.9■□□□□ 0.14
TPT1-201ENST00000309246 MPNDQ8N594 471 aa15.9■□□□□ 0.14
TPT1-201ENST00000309246 RTFDC1Q9BY42 306 aaPredicted RBP15.9■□□□□ 0.14
TPT1-201ENST00000309246 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
TPT1-201ENST00000309246 ZNRF3Q9ULT6 936 aa15.9■□□□□ 0.14
TPT1-201ENST00000309246 COL4A1P02462 1669 aa15.89■□□□□ 0.13
TPT1-201ENST00000309246 TRAF5O00463 557 aa15.89■□□□□ 0.13
TPT1-201ENST00000309246 CTCFP49711 727 aaPredicted RBP15.89■□□□□ 0.13
TPT1-201ENST00000309246 CXCL9Q07325 125 aa15.89■□□□□ 0.13
TPT1-201ENST00000309246 GRAPQ13588 217 aa15.89■□□□□ 0.13
TPT1-201ENST00000309246 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
TPT1-201ENST00000309246 WBP1LQ9NX94 342 aa15.89■□□□□ 0.13
TPT1-201ENST00000309246 GPRC5DQ9NZD1 345 aa15.89■□□□□ 0.13
TPT1-201ENST00000309246 WDR33Q9C0J8 1336 aaKnown RBP15.89■□□□□ 0.13
TPT1-201ENST00000309246 GMPSP49915 693 aaPredicted RBP15.88■□□□□ 0.13
TPT1-201ENST00000309246 KIAA2012Q0VF49 1180 aa15.88■□□□□ 0.13
TPT1-201ENST00000309246 PLBD2Q8NHP8 589 aa15.88■□□□□ 0.13
TPT1-201ENST00000309246 PRDM10Q9NQV6 1147 aa15.88■□□□□ 0.13
TPT1-201ENST00000309246 CIAPIN1Q6FI81 312 aa15.87■□□□□ 0.13
TPT1-201ENST00000309246 PAXIP1Q6ZW49 1069 aaPredicted RBP15.87■□□□□ 0.13
TPT1-201ENST00000309246 ADARB2Q9NS39 739 aaKnown RBP15.87■□□□□ 0.13
TPT1-201ENST00000309246 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
TPT1-201ENST00000309246 POLR2AP24928 1970 aaKnown RBP15.86■□□□□ 0.13
TPT1-201ENST00000309246 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
TPT1-201ENST00000309246 RAD17O75943 681 aa15.86■□□□□ 0.13
TPT1-201ENST00000309246 HOXB7P09629 217 aa15.86■□□□□ 0.13
TPT1-201ENST00000309246 LBX1P52954 281 aa15.86■□□□□ 0.13
TPT1-201ENST00000309246 ANKRD13DQ6ZTN6 518 aa15.86■□□□□ 0.13
TPT1-201ENST00000309246 FAM89AQ96GI7 184 aa15.86■□□□□ 0.13
TPT1-201ENST00000309246 ISCA1Q9BUE6 129 aa15.86■□□□□ 0.13
TPT1-201ENST00000309246 DBF4Q9UBU7 674 aaPredicted RBP15.86■□□□□ 0.13
TPT1-201ENST00000309246 GRM1Q13255 1194 aa15.85■□□□□ 0.13
TPT1-201ENST00000309246 RTL5Q5HYW3 569 aaPredicted RBP15.85■□□□□ 0.13
TPT1-201ENST00000309246 DUSP27Q5VZP5 1158 aa15.85■□□□□ 0.13
TPT1-201ENST00000309246 CST9Q5W186 159 aa15.85■□□□□ 0.13
TPT1-201ENST00000309246 CAPNS2Q96L46 248 aa15.85■□□□□ 0.13
TPT1-201ENST00000309246 BCL2L13Q9BXK5 485 aa15.85■□□□□ 0.13
TPT1-201ENST00000309246 YDJCA8MPS7 323 aa15.84■□□□□ 0.13
TPT1-201ENST00000309246 HSPA8P11142 646 aaKnown RBP15.84■□□□□ 0.13
TPT1-201ENST00000309246 CYP4F22Q6NT55 531 aa15.84■□□□□ 0.13
TPT1-201ENST00000309246 TMC4Q7Z404 712 aa15.84■□□□□ 0.13
TPT1-201ENST00000309246 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
TPT1-201ENST00000309246 CFAP44Q96MT7 982 aa15.84■□□□□ 0.13
TPT1-201ENST00000309246 GLIS2Q9BZE0 524 aaPredicted RBP15.84■□□□□ 0.13
TPT1-201ENST00000309246 MBIPQ9NS73 344 aa15.84■□□□□ 0.13
TPT1-201ENST00000309246 CDHR2Q9BYE9 1310 aa15.84■□□□□ 0.13
TPT1-201ENST00000309246 SHTN1A0MZ66 631 aa15.83■□□□□ 0.12
TPT1-201ENST00000309246 MAP2K1Q02750 393 aaPredicted RBP15.83■□□□□ 0.12
TPT1-201ENST00000309246 MKRN4PQ13434 485 aaPredicted RBP15.83■□□□□ 0.12
TPT1-201ENST00000309246 TNIP1Q15025 636 aa15.83■□□□□ 0.12
TPT1-201ENST00000309246 TRPM4Q8TD43 1214 aa15.83■□□□□ 0.12
TPT1-201ENST00000309246 HYPKQ9NX55 129 aa15.83■□□□□ 0.12
TPT1-201ENST00000309246 TLL2Q9Y6L7 1015 aa15.83■□□□□ 0.12
TPT1-201ENST00000309246 SCN9AQ15858 1988 aa15.83■□□□□ 0.12
TPT1-201ENST00000309246 ECE1P42892 770 aa15.82■□□□□ 0.12
TPT1-201ENST00000309246 HIRAP54198 1017 aaPredicted RBP15.82■□□□□ 0.12
TPT1-201ENST00000309246 SF3B3Q15393 1217 aaKnown RBP15.82■□□□□ 0.12
TPT1-201ENST00000309246 NSFL1CQ9UNZ2 370 aaKnown RBP15.82■□□□□ 0.12
TPT1-201ENST00000309246 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
TPT1-201ENST00000309246 RIMBP2O15034 1052 aa15.81■□□□□ 0.12
TPT1-201ENST00000309246 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
TPT1-201ENST00000309246 WASHC4Q2M389 1173 aa15.81■□□□□ 0.12
TPT1-201ENST00000309246 PRKRIP1Q9H875 184 aaPredicted RBP15.81■□□□□ 0.12
TPT1-201ENST00000309246 DBNDD1Q9H9R9 158 aa15.81■□□□□ 0.12
TPT1-201ENST00000309246 CNOT7Q9UIV1 285 aaKnown RBP15.81■□□□□ 0.12
TPT1-201ENST00000309246 MYH3P11055 1940 aa15.8■□□□□ 0.12
TPT1-201ENST00000309246 PSME4Q14997 1843 aa15.8■□□□□ 0.12
TPT1-201ENST00000309246 ELL2O00472 640 aaPredicted RBP15.8■□□□□ 0.12
TPT1-201ENST00000309246 IRS4O14654 1257 aaPredicted RBP15.8■□□□□ 0.12
TPT1-201ENST00000309246 APAF1O14727 1248 aa15.8■□□□□ 0.12
TPT1-201ENST00000309246 ZNF853P0CG23 659 aa15.8■□□□□ 0.12
TPT1-201ENST00000309246 GPSM2P81274 684 aa15.8■□□□□ 0.12
TPT1-201ENST00000309246 RIC3Q7Z5B4 369 aa15.8■□□□□ 0.12
TPT1-201ENST00000309246 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
TPT1-201ENST00000309246 GPR101Q96P66 508 aaPredicted RBP15.8■□□□□ 0.12
TPT1-201ENST00000309246 PHAXQ9H814 394 aaKnown RBP15.8■□□□□ 0.12
TPT1-201ENST00000309246 ZNF408Q9H9D4 720 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms