RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 DISP2A7MBM2 1401 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 ZNF831Q5JPB2 1677 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 TFCP2Q12800 502 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 G3BP1Q13283 466 aaKnown RBP eCLIP8.68□□□□□ -1.02
RGPD3-201ENST00000304514 TOB2Q14106 344 aaPredicted RBP8.68□□□□□ -1.02
RGPD3-201ENST00000304514 ME3Q16798 604 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 ANKRD13DQ6ZTN6 518 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 SYCE3A1L190 88 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 F13A1P00488 732 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 ATP5JP18859 108 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 DBNLQ9UJU6 430 aaKnown RBP8.68□□□□□ -1.02
RGPD3-201ENST00000304514 TPCN1Q9ULQ1 816 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 TAF6LQ9Y6J9 622 aa8.68□□□□□ -1.02
RGPD3-201ENST00000304514 SOS2Q07890 1332 aaPredicted RBP8.68□□□□□ -1.02
RGPD3-201ENST00000304514 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
RGPD3-201ENST00000304514 CHRNA2Q15822 529 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 CNPY2Q9Y2B0 182 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.67□□□□□ -1.02
RGPD3-201ENST00000304514 H7C1W4 665 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 ATG9AQ7Z3C6 839 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 JAKMIP1Q96N16 626 aaKnown RBP8.67□□□□□ -1.02
RGPD3-201ENST00000304514 SIL1Q9H173 461 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 STX6O43752 255 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 SYT1P21579 422 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 GJB2P29033 226 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
RGPD3-201ENST00000304514 LARP6Q9BRS8 491 aaKnown RBP8.67□□□□□ -1.02
RGPD3-201ENST00000304514 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 ESPNB1AK53 854 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 RPS6KB1P23443 525 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 HS1BP3Q53T59 392 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
RGPD3-201ENST00000304514 SH2B1Q9NRF2 756 aaPredicted RBP8.67□□□□□ -1.02
RGPD3-201ENST00000304514 AHDC1Q5TGY3 1603 aaPredicted RBP8.66□□□□□ -1.02
RGPD3-201ENST00000304514 KLHL34Q8N239 644 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 HAUS7Q99871 368 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 MTMR6Q9Y217 621 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 ERVV-2B6SEH9 535 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 NCLP19338 710 aaKnown RBP8.66□□□□□ -1.02
RGPD3-201ENST00000304514 NEXNQ0ZGT2 675 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 CADPS2Q86UW7 1296 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 CABP4P57796 275 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 TTC5Q8N0Z6 440 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 TAF5LO75529 589 aa8.66□□□□□ -1.02
RGPD3-201ENST00000304514 CCDC83Q8IWF9 413 aa8.65□□□□□ -1.02
RGPD3-201ENST00000304514 BOLA2Q9H3K6 86 aa8.65□□□□□ -1.02
RGPD3-201ENST00000304514 RIC1Q4ADV7 1423 aa8.65□□□□□ -1.02
RGPD3-201ENST00000304514 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
RGPD3-201ENST00000304514 FUCA2Q9BTY2 467 aa8.65□□□□□ -1.02
RGPD3-201ENST00000304514 TSPY26PQ9H489 355 aa8.65□□□□□ -1.03
RGPD3-201ENST00000304514 HMG20BQ9P0W2 317 aa8.65□□□□□ -1.03
RGPD3-201ENST00000304514 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.65□□□□□ -1.03
RGPD3-201ENST00000304514 GPR108Q9NPR9 543 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 GDPD2Q9HCC8 539 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 CHGBP05060 677 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 TICAM2Q86XR7 235 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 EDC3Q96F86 508 aaKnown RBP8.64□□□□□ -1.03
RGPD3-201ENST00000304514 CSB-PGBD3P0DP91 1061 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 UBE3BQ7Z3V4 1068 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 NOL7Q9UMY1 257 aaKnown RBP8.64□□□□□ -1.03
RGPD3-201ENST00000304514 SMC3Q9UQE7 1217 aa8.64□□□□□ -1.03
RGPD3-201ENST00000304514 CIAO1O76071 339 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 PSMA5P28066 241 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 CCDC183Q5T5S1 534 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 ATP5J2-PTCD1G3V325 749 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 PTCD1O75127 700 aaKnown RBP8.63□□□□□ -1.03
RGPD3-201ENST00000304514 UBE2HP62256 183 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 ZCRB1Q8TBF4 217 aaKnown RBP8.63□□□□□ -1.03
RGPD3-201ENST00000304514 COL4A1P02462 1669 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 TTLL7Q6ZT98 887 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 KIAA1551Q9HCM1 1747 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 ATRNO75882 1429 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 ZSCAN30Q86W11 494 aa8.63□□□□□ -1.03
RGPD3-201ENST00000304514 SCN7AQ01118 1682 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 CDC37L1Q7L3B6 337 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.62□□□□□ -1.03
RGPD3-201ENST00000304514 DBNDD2Q9BQY9 259 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 CARD10Q9BWT7 1032 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 NDUFB9Q9Y6M9 179 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 A0A087WZG4 1122 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 NECAB1Q8N987 351 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 ZNF500O60304 480 aaPredicted RBP8.62□□□□□ -1.03
RGPD3-201ENST00000304514 ANKRD1Q15327 319 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 SYAP1Q96A49 352 aaPredicted RBP8.62□□□□□ -1.03
RGPD3-201ENST00000304514 TRIM44Q96DX7 344 aaPredicted RBP8.62□□□□□ -1.03
RGPD3-201ENST00000304514 CWC25Q9NXE8 425 aaPredicted RBP8.62□□□□□ -1.03
RGPD3-201ENST00000304514 ELP1O95163 1332 aa8.62□□□□□ -1.03
RGPD3-201ENST00000304514 LETM1O95202 739 aaPredicted RBP8.61□□□□□ -1.03
RGPD3-201ENST00000304514 ZKSCAN1P17029 563 aaPredicted RBP8.61□□□□□ -1.03
RGPD3-201ENST00000304514 STOX1Q6ZVD7 989 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 ISCA1Q9BUE6 129 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 HELLSQ9NRZ9 838 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 ABCC12Q96J65 1359 aa8.61□□□□□ -1.03
RGPD3-201ENST00000304514 PHF14O94880 888 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms