RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 MYT1Q01538 1121 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 ANO2Q9NQ90 1003 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 SNRKQ9NRH2 765 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
CLP1-201ENST00000302731 UBN2Q6ZU65 1347 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 RAD50Q92878 1312 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 MYH3P11055 1940 aa12.86□□□□□ -0.35
CLP1-201ENST00000302731 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
CLP1-201ENST00000302731 IRS4O14654 1257 aaPredicted RBP12.85□□□□□ -0.35
CLP1-201ENST00000302731 CTSWP56202 376 aa12.85□□□□□ -0.35
CLP1-201ENST00000302731 AKAP2Q9Y2D5 859 aa12.85□□□□□ -0.35
CLP1-201ENST00000302731 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
CLP1-201ENST00000302731 BCORQ6W2J9 1755 aa12.85□□□□□ -0.35
CLP1-201ENST00000302731 BTAF1O14981 1849 aa12.85□□□□□ -0.35
CLP1-201ENST00000302731 ZNF609O15014 1411 aa12.85□□□□□ -0.35
CLP1-201ENST00000302731 ST18O60284 1047 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 HSPA4P34932 840 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLP1-201ENST00000302731 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 ANKRD18BA2A2Z9 1011 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 LRRC24Q50LG9 513 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 LINC00116Q8NCU8 138 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 HAUS7Q99871 368 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
CLP1-201ENST00000302731 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
CLP1-201ENST00000302731 LSG1Q9H089 658 aaKnown RBP12.84□□□□□ -0.35
CLP1-201ENST00000302731 MCM2P49736 904 aa12.83□□□□□ -0.36
CLP1-201ENST00000302731 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
CLP1-201ENST00000302731 CWC27Q6UX04 472 aaKnown RBP12.83□□□□□ -0.36
CLP1-201ENST00000302731 ZNF594Q96JF6 807 aaPredicted RBP12.83□□□□□ -0.36
CLP1-201ENST00000302731 IL25Q9H293 177 aa12.83□□□□□ -0.36
CLP1-201ENST00000302731 SPEF2Q9C093 1822 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 ITGA6P23229 1130 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 SUSD4Q5VX71 490 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
CLP1-201ENST00000302731 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
CLP1-201ENST00000302731 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
CLP1-201ENST00000302731 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 LRP5O75197 1615 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 LY75O60449 1722 aa12.82□□□□□ -0.36
CLP1-201ENST00000302731 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
CLP1-201ENST00000302731 DDIT3P35638 169 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 SEPT12Q8IYM1 358 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 SYNE4Q8N205 404 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 GREM2Q9H772 168 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 LAMB2P55268 1798 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
CLP1-201ENST00000302731 RPS6KA4O75676 772 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 NTSR2O95665 410 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 LDHAL6AQ6ZMR3 332 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 KCNB2Q92953 911 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLP1-201ENST00000302731 RIC1Q4ADV7 1423 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 TIMM10P62072 90 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 NBR1Q14596 966 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 KBTBD3Q8NAB2 608 aa12.8□□□□□ -0.36
CLP1-201ENST00000302731 CCDC171Q6TFL3 1326 aa12.79□□□□□ -0.36
CLP1-201ENST00000302731 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
CLP1-201ENST00000302731 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
CLP1-201ENST00000302731 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
CLP1-201ENST00000302731 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
CLP1-201ENST00000302731 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
CLP1-201ENST00000302731 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
CLP1-201ENST00000302731 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
CLP1-201ENST00000302731 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
CLP1-201ENST00000302731 DDX60Q8IY21 1712 aaKnown RBP12.78□□□□□ -0.36
CLP1-201ENST00000302731 HMGB2P26583 209 aaKnown RBP12.78□□□□□ -0.36
CLP1-201ENST00000302731 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
CLP1-201ENST00000302731 METTL24Q5JXM2 366 aa12.78□□□□□ -0.36
CLP1-201ENST00000302731 VGLL2Q8N8G2 317 aa12.78□□□□□ -0.36
CLP1-201ENST00000302731 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
CLP1-201ENST00000302731 ZNF512BQ96KM6 892 aaPredicted RBP12.78□□□□□ -0.36
CLP1-201ENST00000302731 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
CLP1-201ENST00000302731 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
CLP1-201ENST00000302731 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.36
CLP1-201ENST00000302731 IFIT1P09914 478 aaKnown RBP12.77□□□□□ -0.36
CLP1-201ENST00000302731 NEK4P51957 841 aa12.77□□□□□ -0.36
CLP1-201ENST00000302731 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.36
CLP1-201ENST00000302731 XAGE2Q96GT9 111 aa12.77□□□□□ -0.36
CLP1-201ENST00000302731 FAM227BQ96M60 508 aa12.77□□□□□ -0.36
CLP1-201ENST00000302731 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.36
CLP1-201ENST00000302731 PAG1Q9NWQ8 432 aa12.77□□□□□ -0.36
CLP1-201ENST00000302731 TAF1LQ8IZX4 1826 aa12.77□□□□□ -0.36
CLP1-201ENST00000302731 A0A0D9SFI3 127 aa12.77□□□□□ -0.37
CLP1-201ENST00000302731 PDE8BO95263 885 aa12.77□□□□□ -0.37
CLP1-201ENST00000302731 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms