RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PA2G4Q9UQ80 394 aaKnown RBP22.3■■□□□ 1.16
TSR1-201ENST00000301364 RUFY3Q7L099 469 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 SEC63Q9UGP8 760 aaKnown RBP22.3■■□□□ 1.16
TSR1-201ENST00000301364 YEATS4O95619 227 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 USP5P45974 858 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 MFSD6Q6ZSS7 791 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 KIF24Q5T7B8 1368 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 POTEB2H3BUK9 544 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 SKILP12757 684 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 SYT1P21579 422 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 TRMT2AQ8IZ69 625 aaKnown RBP22.3■■□□□ 1.16
TSR1-201ENST00000301364 TAF4BQ92750 862 aa22.3■■□□□ 1.16
TSR1-201ENST00000301364 ERICH4A6NGS2 130 aa22.29■■□□□ 1.16
TSR1-201ENST00000301364 TTC12Q9H892 705 aaPredicted RBP22.29■■□□□ 1.16
TSR1-201ENST00000301364 ARHGEF5Q12774 1597 aa22.29■■□□□ 1.16
TSR1-201ENST00000301364 LMBR1LQ6UX01 489 aa22.29■■□□□ 1.16
TSR1-201ENST00000301364 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
TSR1-201ENST00000301364 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
TSR1-201ENST00000301364 SKIDA1Q1XH10 827 aa22.29■■□□□ 1.16
TSR1-201ENST00000301364 CCDC194A0A1B0GVG4 234 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 FGFR1OPO95684 399 aaKnown RBP22.28■■□□□ 1.16
TSR1-201ENST00000301364 TUBB4AP04350 444 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 NLRP5P59047 1200 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 LRRC2Q9BYS8 371 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 CCDC191Q8NCU4 936 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 JARID2Q92833 1246 aaPredicted RBP22.28■■□□□ 1.16
TSR1-201ENST00000301364 GPTP24298 496 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 NUP88Q99567 741 aaPredicted RBP22.28■■□□□ 1.16
TSR1-201ENST00000301364 RAB34Q9BZG1 259 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 DNAJC25Q9H1X3 360 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 PRDM10Q9NQV6 1147 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 ZNF445P59923 1031 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 OTUD7AQ8TE49 926 aaPredicted RBP22.28■■□□□ 1.16
TSR1-201ENST00000301364 TRPM2O94759 1503 aa22.28■■□□□ 1.16
TSR1-201ENST00000301364 BMS1Q14692 1282 aaKnown RBP22.27■■□□□ 1.16
TSR1-201ENST00000301364 BICDL1Q6ZP65 573 aa22.27■■□□□ 1.16
TSR1-201ENST00000301364 SLC26A6Q9BXS9 759 aa22.27■■□□□ 1.16
TSR1-201ENST00000301364 G2E3Q7L622 706 aa22.27■■□□□ 1.16
TSR1-201ENST00000301364 KDM5CP41229 1560 aa22.27■■□□□ 1.16
TSR1-201ENST00000301364 FAM193AP78312 1265 aa22.27■■□□□ 1.15
TSR1-201ENST00000301364 CPLX3Q8WVH0 158 aa22.27■■□□□ 1.15
TSR1-201ENST00000301364 ZBTB43O43298 467 aa22.26■■□□□ 1.15
TSR1-201ENST00000301364 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
TSR1-201ENST00000301364 HOXB7P09629 217 aa22.26■■□□□ 1.15
TSR1-201ENST00000301364 UBASH3AP57075 661 aa22.26■■□□□ 1.15
TSR1-201ENST00000301364 ALG1Q9BT22 464 aa22.26■■□□□ 1.15
TSR1-201ENST00000301364 BMP15O95972 392 aa22.26■■□□□ 1.15
TSR1-201ENST00000301364 DZIP1Q86YF9 867 aaKnown RBP22.26■■□□□ 1.15
TSR1-201ENST00000301364 PPFIA3O75145 1194 aa22.25■■□□□ 1.15
TSR1-201ENST00000301364 TSG101Q99816 390 aa22.25■■□□□ 1.15
TSR1-201ENST00000301364 ZNF444Q8N0Y2 327 aaPredicted RBP22.25■■□□□ 1.15
TSR1-201ENST00000301364 KRT23Q9C075 422 aa22.25■■□□□ 1.15
TSR1-201ENST00000301364 PAG1Q9NWQ8 432 aa22.25■■□□□ 1.15
TSR1-201ENST00000301364 USO1O60763 962 aaKnown RBP22.25■■□□□ 1.15
TSR1-201ENST00000301364 KIF5BP33176 963 aa22.25■■□□□ 1.15
TSR1-201ENST00000301364 CCDC144CPQ8IYA2 1237 aa22.25■■□□□ 1.15
TSR1-201ENST00000301364 SLC39A6Q13433 755 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 ATL3Q6DD88 541 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 RBSNQ9H1K0 784 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 CNNM2Q9H8M5 875 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 ATP2B3Q16720 1220 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 DHX32Q7L7V1 743 aaKnown RBP22.24■■□□□ 1.15
TSR1-201ENST00000301364 CDC5LQ99459 802 aaKnown RBP22.24■■□□□ 1.15
TSR1-201ENST00000301364 MAGI2Q86UL8 1455 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 HOXC9P31274 260 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 CWF19L2Q2TBE0 894 aaKnown RBP22.24■■□□□ 1.15
TSR1-201ENST00000301364 CALCOCO1Q9P1Z2 691 aa22.24■■□□□ 1.15
TSR1-201ENST00000301364 PLXNC1O60486 1568 aa22.23■■□□□ 1.15
TSR1-201ENST00000301364 ISM2Q6H9L7 571 aa22.23■■□□□ 1.15
TSR1-201ENST00000301364 CACNA2D4Q7Z3S7 1137 aa22.23■■□□□ 1.15
TSR1-201ENST00000301364 RAB11FIP4Q86YS3 637 aa22.23■■□□□ 1.15
TSR1-201ENST00000301364 GNG11P61952 73 aa22.23■■□□□ 1.15
TSR1-201ENST00000301364 SPTLC2O15270 562 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 TMEM266Q2M3C6 531 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 WTAPQ15007 396 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 AOPEPQ8N6M6 819 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 ZNF521Q96K83 1311 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 PPP1R12BO60237 982 aaPredicted RBP22.22■■□□□ 1.15
TSR1-201ENST00000301364 KIF20AO95235 890 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 USP8P40818 1118 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 CENPHQ9H3R5 247 aa22.22■■□□□ 1.15
TSR1-201ENST00000301364 ABCC4O15439 1325 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 PAFAH1B1P43034 410 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 CADPS2Q86UW7 1296 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 RRAGDQ9NQL2 400 aaPredicted RBP22.21■■□□□ 1.15
TSR1-201ENST00000301364 TCP11L1Q9NUJ3 509 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.21■■□□□ 1.15
TSR1-201ENST00000301364 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 KDM5AP29375 1690 aaKnown RBP22.21■■□□□ 1.15
TSR1-201ENST00000301364 CCDC12Q8WUD4 166 aaPredicted RBP22.21■■□□□ 1.15
TSR1-201ENST00000301364 DDX21Q9NR30 783 aaKnown RBP eCLIP22.21■■□□□ 1.15
TSR1-201ENST00000301364 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 SGSM2O43147 1006 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 AMPD3Q01432 767 aa22.21■■□□□ 1.15
TSR1-201ENST00000301364 NUTM2BA6NNL0 878 aaPredicted RBP22.21■■□□□ 1.15
TSR1-201ENST00000301364 NUTM2EB1AL46 878 aaPredicted RBP22.21■■□□□ 1.15
TSR1-201ENST00000301364 NUTM2AQ8IVF1 878 aaPredicted RBP22.21■■□□□ 1.15
TSR1-201ENST00000301364 RNF113AO15541 343 aaKnown RBP22.2■■□□□ 1.14
TSR1-201ENST00000301364 IP6K1Q92551 441 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms