RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
CDT1-201ENST00000301019 TBC1D8O95759 1140 aa16.85■□□□□ 0.29
CDT1-201ENST00000301019 ST3GAL1Q11201 340 aa16.85■□□□□ 0.29
CDT1-201ENST00000301019 THEMISQ8N1K5 641 aaPredicted RBP16.85■□□□□ 0.29
CDT1-201ENST00000301019 TDRD7Q8NHU6 1098 aaKnown RBP16.85■□□□□ 0.29
CDT1-201ENST00000301019 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
CDT1-201ENST00000301019 LEO1Q8WVC0 666 aaPredicted RBP16.85■□□□□ 0.29
CDT1-201ENST00000301019 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
CDT1-201ENST00000301019 PDE6BP35913 854 aa16.85■□□□□ 0.29
CDT1-201ENST00000301019 DEF6Q9H4E7 631 aa16.85■□□□□ 0.29
CDT1-201ENST00000301019 AK7Q96M32 723 aa16.85■□□□□ 0.29
CDT1-201ENST00000301019 UTP14AQ9BVJ6 771 aaKnown RBP16.85■□□□□ 0.29
CDT1-201ENST00000301019 PDE11AQ9HCR9 933 aa16.85■□□□□ 0.29
CDT1-201ENST00000301019 HYPKQ9NX55 129 aa16.85■□□□□ 0.29
CDT1-201ENST00000301019 CHRM1P11229 460 aaPredicted RBP16.84■□□□□ 0.29
CDT1-201ENST00000301019 EID1Q9Y6B2 187 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
CDT1-201ENST00000301019 PSEN1P49768 467 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 GDAP1L1Q96MZ0 367 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 HINFPQ9BQA5 517 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
CDT1-201ENST00000301019 TAF6LQ9Y6J9 622 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 MED14O60244 1454 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 NRXN3Q9Y4C0 1643 aa16.84■□□□□ 0.29
CDT1-201ENST00000301019 ARHGEF28Q8N1W1 1705 aaKnown RBP16.83■□□□□ 0.29
CDT1-201ENST00000301019 ATP10DQ9P241 1426 aa16.83■□□□□ 0.29
CDT1-201ENST00000301019 FCHSD2O94868 740 aa16.83■□□□□ 0.29
CDT1-201ENST00000301019 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.29
CDT1-201ENST00000301019 CCDC102AQ96A19 550 aa16.83■□□□□ 0.29
CDT1-201ENST00000301019 CLSTN2Q9H4D0 955 aa16.83■□□□□ 0.29
CDT1-201ENST00000301019 GEMIN8Q9NWZ8 242 aaKnown RBP16.83■□□□□ 0.29
CDT1-201ENST00000301019 EIF3CLB5ME19 914 aaKnown RBP16.83■□□□□ 0.28
CDT1-201ENST00000301019 FANCGO15287 622 aa16.83■□□□□ 0.28
CDT1-201ENST00000301019 ANAPC15P60006 121 aa16.83■□□□□ 0.28
CDT1-201ENST00000301019 SLC26A8Q96RN1 970 aa16.83■□□□□ 0.28
CDT1-201ENST00000301019 EIF3CQ99613 913 aaKnown RBP16.83■□□□□ 0.28
CDT1-201ENST00000301019 XPO4Q9C0E2 1151 aaKnown RBP16.83■□□□□ 0.28
CDT1-201ENST00000301019 CABP1Q9NZU7 370 aa16.83■□□□□ 0.28
CDT1-201ENST00000301019 A0A1B0GUL7 405 aa16.83■□□□□ 0.28
CDT1-201ENST00000301019 RAB11FIP3O75154 756 aa16.83■□□□□ 0.28
CDT1-201ENST00000301019 QRICH2Q9H0J4 1663 aa16.83■□□□□ 0.28
CDT1-201ENST00000301019 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 METP08581 1390 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 H3BQV1 296 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 OS9Q13438 667 aaPredicted RBP16.82■□□□□ 0.28
CDT1-201ENST00000301019 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 FBXO18Q8NFZ0 1043 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 TTC14Q96N46 770 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 ZRANB2O95218 330 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDT1-201ENST00000301019 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 SLIT1O75093 1534 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 ARHGAP23Q9P227 1491 aa16.82■□□□□ 0.28
CDT1-201ENST00000301019 NCAPGQ9BPX3 1015 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 SDF4Q9BRK5 362 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 CCDC9Q9Y3X0 531 aaKnown RBP16.81■□□□□ 0.28
CDT1-201ENST00000301019 PLEKHG1Q9ULL1 1385 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 KARSQ15046 597 aaKnown RBP16.81■□□□□ 0.28
CDT1-201ENST00000301019 IQCB1Q15051 598 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 ZRSR1Q15695 479 aaKnown RBP16.81■□□□□ 0.28
CDT1-201ENST00000301019 CC2D1AQ6P1N0 951 aaPredicted RBP16.81■□□□□ 0.28
CDT1-201ENST00000301019 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 PDILTQ8N807 584 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 IRX2Q9BZI1 471 aaPredicted RBP16.81■□□□□ 0.28
CDT1-201ENST00000301019 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 CYP46A1Q9Y6A2 500 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 SETD1AO15047 1707 aaKnown RBP16.81■□□□□ 0.28
CDT1-201ENST00000301019 ARFGAP3Q9NP61 516 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 FAN1Q9Y2M0 1017 aa16.81■□□□□ 0.28
CDT1-201ENST00000301019 GNAI2P04899 355 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 GUCY2CP25092 1073 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 GNG11P61952 73 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
CDT1-201ENST00000301019 PARD6BQ9BYG5 372 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
CDT1-201ENST00000301019 MNAT1P51948 309 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 SLFNL1Q499Z3 407 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
CDT1-201ENST00000301019 ACTN2P35609 894 aa16.79■□□□□ 0.28
CDT1-201ENST00000301019 LIG3P49916 1009 aa16.79■□□□□ 0.28
CDT1-201ENST00000301019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.79■□□□□ 0.28
CDT1-201ENST00000301019 PTCH1Q13635 1447 aa16.79■□□□□ 0.28
CDT1-201ENST00000301019 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
CDT1-201ENST00000301019 TSGA10IPQ3SY00 556 aa16.79■□□□□ 0.28
CDT1-201ENST00000301019 DDX19AQ9NUU7 478 aaKnown RBP16.79■□□□□ 0.28
CDT1-201ENST00000301019 GOLGA5Q8TBA6 731 aa16.79■□□□□ 0.28
CDT1-201ENST00000301019 RHOXF2BP0C7M4 288 aa16.78■□□□□ 0.28
CDT1-201ENST00000301019 ATP1A3P13637 1013 aa16.78■□□□□ 0.28
CDT1-201ENST00000301019 ME1P48163 572 aa16.78■□□□□ 0.28
CDT1-201ENST00000301019 NOM1Q5C9Z4 860 aaKnown RBP16.78■□□□□ 0.28
CDT1-201ENST00000301019 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
CDT1-201ENST00000301019 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
CDT1-201ENST00000301019 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
CDT1-201ENST00000301019 DESI2Q9BSY9 194 aa16.78■□□□□ 0.28
CDT1-201ENST00000301019 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
CDT1-201ENST00000301019 BICC1Q9H694 974 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms