RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 KIFC2Q96AC6 838 aa16.33■□□□□ 0.21
SPRED1-201ENST00000299084 ANKFY1Q9P2R3 1169 aa16.33■□□□□ 0.21
SPRED1-201ENST00000299084 HSPA4P34932 840 aa16.33■□□□□ 0.2
SPRED1-201ENST00000299084 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
SPRED1-201ENST00000299084 PLCB3Q01970 1234 aa16.33■□□□□ 0.2
SPRED1-201ENST00000299084 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
SPRED1-201ENST00000299084 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
SPRED1-201ENST00000299084 SMARCC2Q8TAQ2 1214 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 CCDC77Q9BR77 488 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 CWC25Q9NXE8 425 aaPredicted RBP16.32■□□□□ 0.2
SPRED1-201ENST00000299084 MCM10Q7L590 875 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 CCDC65Q8IXS2 484 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 PICK1Q9NRD5 415 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 SPDYE3A6NKU9 549 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 KIF18AQ8NI77 898 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 HSF2BPO75031 334 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 NSMCE1Q8WV22 266 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 FAM114A2Q9NRY5 505 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 M0QZ92 97 aa16.32■□□□□ 0.2
SPRED1-201ENST00000299084 GTF2A1P52655 376 aaPredicted RBP16.32■□□□□ 0.2
SPRED1-201ENST00000299084 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 STMN4Q9H169 189 aaPredicted RBP16.31■□□□□ 0.2
SPRED1-201ENST00000299084 DAPK3O43293 454 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 GPTP24298 496 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 TMEM67Q5HYA8 995 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 TRIM7Q9C029 511 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 STX8Q9UNK0 236 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 CUX1P39880 1505 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
SPRED1-201ENST00000299084 AFG3L2Q9Y4W6 797 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 GJA3Q9Y6H8 435 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 RRP9O43818 475 aaKnown RBP16.31■□□□□ 0.2
SPRED1-201ENST00000299084 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
SPRED1-201ENST00000299084 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
SPRED1-201ENST00000299084 ALDH3A1P30838 453 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 CEP120Q8N960 986 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 TMOD4Q9NZQ9 345 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 IVNS1ABPQ9Y6Y0 642 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 TEX13AQ9BXU3 409 aaPredicted RBP16.3■□□□□ 0.2
SPRED1-201ENST00000299084 E7EVH7 732 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 BOLA2Q9H3K6 86 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 CCDC110Q8TBZ0 833 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 GOLIM4O00461 696 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 RFC1P35251 1148 aaPredicted RBP16.3■□□□□ 0.2
SPRED1-201ENST00000299084 GUCY1B3Q02153 619 aa16.3■□□□□ 0.2
SPRED1-201ENST00000299084 ERCC3P19447 782 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 TERF1P54274 439 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 PICALMQ13492 652 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 CCDC152Q4G0S7 254 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 CCDC125Q86Z20 511 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 RAB3IPQ96QF0 476 aaPredicted RBP16.29■□□□□ 0.2
SPRED1-201ENST00000299084 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 ERCC6LQ2NKX8 1250 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
SPRED1-201ENST00000299084 BACH1O14867 736 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 MIPOL1Q8TD10 442 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 AMOTQ4VCS5 1084 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 AFAP1L2Q8N4X5 818 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
SPRED1-201ENST00000299084 PLCB4Q15147 1175 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 RMND1Q9NWS8 449 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
SPRED1-201ENST00000299084 SARNPP82979 210 aaKnown RBP16.28■□□□□ 0.2
SPRED1-201ENST00000299084 KIF22Q14807 665 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 WDR46O15213 610 aaKnown RBP16.28■□□□□ 0.2
SPRED1-201ENST00000299084 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 FAM200AQ8TCP9 573 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 NBPF7P0C2Y1 421 aaPredicted RBP16.28■□□□□ 0.2
SPRED1-201ENST00000299084 ZNF569Q5MCW4 686 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 ZNF804AQ7Z570 1209 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 ZBTB21Q9ULJ3 1066 aa16.28■□□□□ 0.2
SPRED1-201ENST00000299084 STK10O94804 968 aaKnown RBP16.27■□□□□ 0.2
SPRED1-201ENST00000299084 ANKS4BQ8N8V4 417 aa16.27■□□□□ 0.2
SPRED1-201ENST00000299084 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
SPRED1-201ENST00000299084 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.2
SPRED1-201ENST00000299084 MVPQ14764 893 aaKnown RBP16.27■□□□□ 0.2
SPRED1-201ENST00000299084 SPAG5Q96R06 1193 aa16.27■□□□□ 0.2
SPRED1-201ENST00000299084 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.2
SPRED1-201ENST00000299084 CTAGE5O15320 804 aa16.27■□□□□ 0.19
SPRED1-201ENST00000299084 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.19
SPRED1-201ENST00000299084 SPC25Q9HBM1 224 aa16.27■□□□□ 0.19
SPRED1-201ENST00000299084 STAT6P42226 847 aa16.27■□□□□ 0.19
SPRED1-201ENST00000299084 CABP1Q9NZU7 370 aa16.27■□□□□ 0.19
SPRED1-201ENST00000299084 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms