RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TRMT112Q9UI30 125 aaKnown RBP17.35■□□□□ 0.37
C9orf3-202ENST00000297979 MYH3P11055 1940 aa17.35■□□□□ 0.37
C9orf3-202ENST00000297979 CIAO1O76071 339 aa17.35■□□□□ 0.37
C9orf3-202ENST00000297979 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
C9orf3-202ENST00000297979 CSF1RP07333 972 aa17.35■□□□□ 0.37
C9orf3-202ENST00000297979 EYA2O00167 538 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 SNX21Q969T3 373 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 BCORQ6W2J9 1755 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 SBF2Q86WG5 1849 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 SYNE4Q8N205 404 aa17.34■□□□□ 0.37
C9orf3-202ENST00000297979 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-202ENST00000297979 DBNLQ9UJU6 430 aaKnown RBP17.34■□□□□ 0.37
C9orf3-202ENST00000297979 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-202ENST00000297979 GPR108Q9NPR9 543 aa17.33■□□□□ 0.36
C9orf3-202ENST00000297979 CTSWP56202 376 aa17.33■□□□□ 0.36
C9orf3-202ENST00000297979 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
C9orf3-202ENST00000297979 IFIT5Q13325 482 aaKnown RBP17.32■□□□□ 0.36
C9orf3-202ENST00000297979 LRRC24Q50LG9 513 aa17.32■□□□□ 0.36
C9orf3-202ENST00000297979 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
C9orf3-202ENST00000297979 PDE8AO60658 829 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 RABEP1Q15276 862 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 PARP10Q53GL7 1025 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 TTLL11Q8NHH1 800 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 NAP1L5Q96NT1 182 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-202ENST00000297979 CCDC85AQ96PX6 553 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-202ENST00000297979 ZNF609O15014 1411 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 ATP5JP18859 108 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 QTRT2Q9H974 415 aaKnown RBP17.31■□□□□ 0.36
C9orf3-202ENST00000297979 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
C9orf3-202ENST00000297979 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
C9orf3-202ENST00000297979 KCNQ4P56696 695 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 GLIPR1L2Q4G1C9 344 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 PUS3Q9BZE2 481 aaKnown RBP17.3■□□□□ 0.36
C9orf3-202ENST00000297979 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 LY75O60449 1722 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 SGSM2O43147 1006 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 SUSD4Q5VX71 490 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 AK7Q96M32 723 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 IL25Q9H293 177 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 SH3TC1Q8TE82 1336 aa17.3■□□□□ 0.36
C9orf3-202ENST00000297979 MCCP23508 829 aa17.29■□□□□ 0.36
C9orf3-202ENST00000297979 UTP14AQ9BVJ6 771 aaKnown RBP17.29■□□□□ 0.36
C9orf3-202ENST00000297979 RC3H1Q5TC82 1133 aaKnown RBP17.29■□□□□ 0.36
C9orf3-202ENST00000297979 RUFY2Q8WXA3 655 aa17.29■□□□□ 0.36
C9orf3-202ENST00000297979 GREM2Q9H772 168 aa17.29■□□□□ 0.36
C9orf3-202ENST00000297979 CCNL1Q9UK58 526 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-202ENST00000297979 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
C9orf3-202ENST00000297979 ITGA6P23229 1130 aa17.29■□□□□ 0.36
C9orf3-202ENST00000297979 CWC27Q6UX04 472 aaKnown RBP17.29■□□□□ 0.36
C9orf3-202ENST00000297979 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
C9orf3-202ENST00000297979 NIP7Q9Y221 180 aaKnown RBP eCLIP17.29■□□□□ 0.36
C9orf3-202ENST00000297979 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
C9orf3-202ENST00000297979 HIP1O00291 1037 aa17.28■□□□□ 0.36
C9orf3-202ENST00000297979 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
C9orf3-202ENST00000297979 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
C9orf3-202ENST00000297979 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
C9orf3-202ENST00000297979 LAMB2P55268 1798 aa17.28■□□□□ 0.36
C9orf3-202ENST00000297979 TAF1LQ8IZX4 1826 aa17.27■□□□□ 0.36
C9orf3-202ENST00000297979 FSD1Q9BTV5 496 aa17.27■□□□□ 0.35
C9orf3-202ENST00000297979 SLKQ9H2G2 1235 aaPredicted RBP17.27■□□□□ 0.35
C9orf3-202ENST00000297979 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.35
C9orf3-202ENST00000297979 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 RGL2O15211 777 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.26■□□□□ 0.35
C9orf3-202ENST00000297979 RAD50Q92878 1312 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 CD2BP2O95400 341 aaKnown RBP17.26■□□□□ 0.35
C9orf3-202ENST00000297979 NTSR2O95665 410 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 TIMM10P62072 90 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 HAUS7Q99871 368 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 AKAP2Q9Y2D5 859 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 LRP5O75197 1615 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
C9orf3-202ENST00000297979 HSP90B1P14625 803 aaKnown RBP17.25■□□□□ 0.35
C9orf3-202ENST00000297979 ANAPC15P60006 121 aa17.25■□□□□ 0.35
C9orf3-202ENST00000297979 KIAA1211Q6ZU35 1233 aa17.25■□□□□ 0.35
C9orf3-202ENST00000297979 ANTXR1Q9H6X2 564 aa17.25■□□□□ 0.35
C9orf3-202ENST00000297979 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-202ENST00000297979 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-202ENST00000297979 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
C9orf3-202ENST00000297979 LSG1Q9H089 658 aaKnown RBP17.25■□□□□ 0.35
C9orf3-202ENST00000297979 RFX7Q2KHR2 1363 aa17.24■□□□□ 0.35
C9orf3-202ENST00000297979 GNPATO15228 680 aa17.24■□□□□ 0.35
C9orf3-202ENST00000297979 RIPOR2Q9Y4F9 1068 aa17.24■□□□□ 0.35
C9orf3-202ENST00000297979 NBR1Q14596 966 aa17.24■□□□□ 0.35
C9orf3-202ENST00000297979 SPRYD3Q8NCJ5 442 aa17.24■□□□□ 0.35
C9orf3-202ENST00000297979 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
C9orf3-202ENST00000297979 BRWD3Q6RI45 1802 aa17.23■□□□□ 0.35
C9orf3-202ENST00000297979 ST18O60284 1047 aa17.23■□□□□ 0.35
C9orf3-202ENST00000297979 HSPA4P34932 840 aa17.23■□□□□ 0.35
C9orf3-202ENST00000297979 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
C9orf3-202ENST00000297979 IL17RAQ96F46 866 aa17.23■□□□□ 0.35
C9orf3-202ENST00000297979 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms