RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 MYH3P11055 1940 aa15.26■□□□□ 0.03
CDK5-201ENST00000297518 F6X3S4 739 aa15.26■□□□□ 0.03
CDK5-201ENST00000297518 PDE8AO60658 829 aa15.26■□□□□ 0.03
CDK5-201ENST00000297518 SLC51AQ86UW1 340 aa15.26■□□□□ 0.03
CDK5-201ENST00000297518 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
CDK5-201ENST00000297518 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
CDK5-201ENST00000297518 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDK5-201ENST00000297518 GCKRQ14397 625 aa15.25■□□□□ 0.03
CDK5-201ENST00000297518 UBE3BQ7Z3V4 1068 aa15.25■□□□□ 0.03
CDK5-201ENST00000297518 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
CDK5-201ENST00000297518 MRPL50Q8N5N7 158 aaKnown RBP15.25■□□□□ 0.03
CDK5-201ENST00000297518 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
CDK5-201ENST00000297518 H7C1W4 665 aa15.24■□□□□ 0.03
CDK5-201ENST00000297518 CT47B1P0C2W7 299 aaPredicted RBP15.24■□□□□ 0.03
CDK5-201ENST00000297518 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
CDK5-201ENST00000297518 CCDC152Q4G0S7 254 aa15.24■□□□□ 0.03
CDK5-201ENST00000297518 BEND3Q5T5X7 828 aa15.24■□□□□ 0.03
CDK5-201ENST00000297518 SP8Q8IXZ3 490 aa15.24■□□□□ 0.03
CDK5-201ENST00000297518 COL4A1P02462 1669 aa15.24■□□□□ 0.03
CDK5-201ENST00000297518 GLTPD2A6NH11 291 aa15.23■□□□□ 0.03
CDK5-201ENST00000297518 CTSWP56202 376 aa15.23■□□□□ 0.03
CDK5-201ENST00000297518 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
CDK5-201ENST00000297518 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
CDK5-201ENST00000297518 NMRK2Q9NPI5 230 aa15.23■□□□□ 0.03
CDK5-201ENST00000297518 PTPRCP08575 1304 aa15.22■□□□□ 0.03
CDK5-201ENST00000297518 KIF3CO14782 793 aa15.22■□□□□ 0.03
CDK5-201ENST00000297518 DPY19L2Q6NUT2 758 aa15.22■□□□□ 0.03
CDK5-201ENST00000297518 BCL2L13Q9BXK5 485 aa15.22■□□□□ 0.03
CDK5-201ENST00000297518 CASP7P55210 303 aa15.21■□□□□ 0.03
CDK5-201ENST00000297518 C1QTNF8P60827 252 aa15.21■□□□□ 0.03
CDK5-201ENST00000297518 RPS8P62241 208 aaKnown RBP15.21■□□□□ 0.03
CDK5-201ENST00000297518 SLC4A10Q6U841 1118 aa15.21■□□□□ 0.03
CDK5-201ENST00000297518 DPP8Q6V1X1 898 aaPredicted RBP15.21■□□□□ 0.03
CDK5-201ENST00000297518 MPNDQ8N594 471 aa15.21■□□□□ 0.03
CDK5-201ENST00000297518 CCDC85AQ96PX6 553 aaPredicted RBP15.21■□□□□ 0.03
CDK5-201ENST00000297518 RTFDC1Q9BY42 306 aaPredicted RBP15.21■□□□□ 0.03
CDK5-201ENST00000297518 SEC31BQ9NQW1 1179 aa15.21■□□□□ 0.03
CDK5-201ENST00000297518 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
CDK5-201ENST00000297518 WDR90Q96KV7 1748 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 ALDH1L1O75891 902 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 SUPT20HQ8NEM7 779 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 JDP2Q8WYK2 163 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 PLA2G12BQ9BX93 195 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 SRCIN1Q9C0H9 1055 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 RTL9Q8NET4 1388 aa15.2■□□□□ 0.02
CDK5-201ENST00000297518 DUOX1Q9NRD9 1551 aa15.19■□□□□ 0.02
CDK5-201ENST00000297518 COL4A5P29400 1685 aa15.19■□□□□ 0.02
CDK5-201ENST00000297518 LARGE2Q8N3Y3 721 aa15.19■□□□□ 0.02
CDK5-201ENST00000297518 VPS33BQ9H267 617 aa15.19■□□□□ 0.02
CDK5-201ENST00000297518 RRAGCQ9HB90 399 aa15.19■□□□□ 0.02
CDK5-201ENST00000297518 LTBP1Q14766 1721 aa15.19■□□□□ 0.02
CDK5-201ENST00000297518 SPEF2Q9C093 1822 aa15.18■□□□□ 0.02
CDK5-201ENST00000297518 FZD9O00144 591 aa15.18■□□□□ 0.02
CDK5-201ENST00000297518 GRM8O00222 908 aa15.18■□□□□ 0.02
CDK5-201ENST00000297518 PPIP5K2O43314 1243 aa15.18■□□□□ 0.02
CDK5-201ENST00000297518 AOC3Q16853 763 aa15.18■□□□□ 0.02
CDK5-201ENST00000297518 ANKRD18AQ8IVF6 992 aa15.18■□□□□ 0.02
CDK5-201ENST00000297518 CDC5LQ99459 802 aaKnown RBP15.18■□□□□ 0.02
CDK5-201ENST00000297518 GREM2Q9H772 168 aa15.18■□□□□ 0.02
CDK5-201ENST00000297518 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
CDK5-201ENST00000297518 DDNO94850 711 aaPredicted RBP15.17■□□□□ 0.02
CDK5-201ENST00000297518 RARSP54136 660 aaKnown RBP15.17■□□□□ 0.02
CDK5-201ENST00000297518 NIM1KQ8IY84 436 aa15.17■□□□□ 0.02
CDK5-201ENST00000297518 C16orf71Q8IYS4 520 aaPredicted RBP15.17■□□□□ 0.02
CDK5-201ENST00000297518 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
CDK5-201ENST00000297518 NSFL1CQ9UNZ2 370 aaKnown RBP15.17■□□□□ 0.02
CDK5-201ENST00000297518 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
CDK5-201ENST00000297518 TOMM70O94826 608 aa15.16■□□□□ 0.02
CDK5-201ENST00000297518 CSF1RP07333 972 aa15.16■□□□□ 0.02
CDK5-201ENST00000297518 VEGFAP15692 232 aaPredicted RBP15.16■□□□□ 0.02
CDK5-201ENST00000297518 BRPF1P55201 1214 aaPredicted RBP15.16■□□□□ 0.02
CDK5-201ENST00000297518 GPSM2P81274 684 aa15.16■□□□□ 0.02
CDK5-201ENST00000297518 KIAA2012Q0VF49 1180 aa15.16■□□□□ 0.02
CDK5-201ENST00000297518 ITGA6P23229 1130 aa15.15■□□□□ 0.02
CDK5-201ENST00000297518 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
CDK5-201ENST00000297518 FOXO4P98177 505 aa15.15■□□□□ 0.02
CDK5-201ENST00000297518 FAM161AQ3B820 660 aa15.15■□□□□ 0.02
CDK5-201ENST00000297518 L3MBTL3Q96JM7 780 aaPredicted RBP15.15■□□□□ 0.02
CDK5-201ENST00000297518 PODXL2Q9NZ53 605 aa15.15■□□□□ 0.02
CDK5-201ENST00000297518 SCN4AP35499 1836 aa15.15■□□□□ 0.02
CDK5-201ENST00000297518 POTECB2RU33 542 aa15.14■□□□□ 0.01
CDK5-201ENST00000297518 C6orf229H3BNL8 230 aa15.14■□□□□ 0.01
CDK5-201ENST00000297518 RBM46Q8TBY0 533 aaKnown RBP15.14■□□□□ 0.01
CDK5-201ENST00000297518 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
CDK5-201ENST00000297518 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
CDK5-201ENST00000297518 POLLQ9UGP5 575 aa15.14■□□□□ 0.01
CDK5-201ENST00000297518 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
CDK5-201ENST00000297518 UTYO14607 1347 aa15.14■□□□□ 0.01
CDK5-201ENST00000297518 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
CDK5-201ENST00000297518 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
CDK5-201ENST00000297518 WASHC4Q2M389 1173 aa15.13■□□□□ 0.01
CDK5-201ENST00000297518 GPC2Q8N158 579 aa15.13■□□□□ 0.01
CDK5-201ENST00000297518 TBC1D16Q8TBP0 767 aa15.13■□□□□ 0.01
CDK5-201ENST00000297518 EYA3Q99504 573 aa15.13■□□□□ 0.01
CDK5-201ENST00000297518 API5Q9BZZ5 524 aaKnown RBP15.13■□□□□ 0.01
CDK5-201ENST00000297518 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
CDK5-201ENST00000297518 XDHP47989 1333 aa15.13■□□□□ 0.01
CDK5-201ENST00000297518 ANKRD18BA2A2Z9 1011 aa15.12■□□□□ 0.01
CDK5-201ENST00000297518 IQCA1LA6NCM1 817 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms