RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 RPS6KB1P23443 525 aa11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CABP4P57796 275 aa11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 TNNI3KQ59H18 835 aa11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ZKSCAN5Q9Y2L8 839 aa11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 FPGT-TNNI3KV9GXZ4 949 aa11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 COL14A1Q05707 1796 aaKnown RBP11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CCDC83Q8IWF9 413 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CCDC8Q9H0W5 538 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 WNK3Q9BYP7 1800 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ERVV-2B6SEH9 535 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 MYL6BP14649 208 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 PTPN12Q05209 780 aaKnown RBP11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 SLC39A6Q13433 755 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ADCK5Q3MIX3 580 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 FAM227BQ96M60 508 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 HAUS7Q99871 368 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
TNFRSF11B-201ENST00000297350 TJP1Q07157 1748 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CYP27B1O15528 508 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 TAF5LO75529 589 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CNPY2Q9Y2B0 182 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 CASP7P55210 303 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 KRT85P78386 507 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ME3Q16798 604 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 BOLA2Q9H3K6 86 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
TNFRSF11B-201ENST00000297350 GADD45BO75293 160 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 LARGE1O95461 756 aa11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 SCAND2PQ9GZW5 306 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 SIL1Q9H173 461 aa11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 COL16A1Q07092 1604 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 WDR17Q8IZU2 1322 aa11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 H7C1W4 665 aa11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 LRRFIP1Q32MZ4 808 aaKnown RBP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 TPCN1Q9ULQ1 816 aa11.9□□□□□ -0.5
TNFRSF11B-201ENST00000297350 KCPQ6ZWJ8 1503 aa11.9□□□□□ -0.51
TNFRSF11B-201ENST00000297350 A0A087WZG4 1122 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CIAO1O76071 339 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 EPHA10Q5JZY3 1008 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 UBE3BQ7Z3V4 1068 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CHAMP1Q96JM3 812 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 LLPHQ9BRT6 129 aaKnown RBP11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 HELLSQ9NRZ9 838 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 KIF3AQ9Y496 699 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 USP16Q9Y5T5 823 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 TNS2Q63HR2 1409 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 TPM3P06753 285 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 IL15P40933 162 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CABLES1Q8TDN4 633 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CWC25Q9NXE8 425 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 ABCC12Q96J65 1359 aa11.89□□□□□ -0.51
TNFRSF11B-201ENST00000297350 TFCP2Q12800 502 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 KBTBD3Q8NAB2 608 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CCDC191Q8NCU4 936 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 FIBPO43427 364 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CPA1P15085 419 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 ST3GAL1Q11201 340 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 GDPD2Q9HCC8 539 aa11.88□□□□□ -0.51
TNFRSF11B-201ENST00000297350 ZNF609O15014 1411 aa11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 TOB2Q14106 344 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 NEK1Q96PY6 1258 aa11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CCDC192P0DO97 292 aa11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 ZCRB1Q8TBF4 217 aaKnown RBP11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 GTF3C6Q969F1 213 aa11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 FUCA2Q9BTY2 467 aa11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CAVIN2O95810 425 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 PTMAP06454 111 aaKnown RBP11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 FOXO4P98177 505 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 DNM1Q05193 864 aaKnown RBP11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 ATL3Q6DD88 541 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 DDX19AQ9NUU7 478 aaKnown RBP11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 LRP6O75581 1613 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 ZNF589Q86UQ0 364 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 KLHDC4Q8TBB5 520 aa11.86□□□□□ -0.51
TNFRSF11B-201ENST00000297350 TOGARAM1Q9Y4F4 1720 aa11.85□□□□□ -0.51
TNFRSF11B-201ENST00000297350 RRP9O43818 475 aaKnown RBP11.85□□□□□ -0.51
TNFRSF11B-201ENST00000297350 HMGN5P82970 282 aaKnown RBP11.85□□□□□ -0.51
TNFRSF11B-201ENST00000297350 KIAA2012Q0VF49 1180 aa11.85□□□□□ -0.51
TNFRSF11B-201ENST00000297350 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
TNFRSF11B-201ENST00000297350 FBXL16Q8N461 479 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms