RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 CCDC152Q4G0S7 254 aa28.38■■■□□ 2.13
LINC01116-201ENST00000295549 TTLL11Q8NHH1 800 aa28.38■■■□□ 2.13
LINC01116-201ENST00000295549 TNRC6CQ9HCJ0 1690 aaKnown RBP28.38■■■□□ 2.13
LINC01116-201ENST00000295549 STYK1Q6J9G0 422 aa28.37■■■□□ 2.13
LINC01116-201ENST00000295549 RPGRQ92834 1020 aaKnown RBP28.37■■■□□ 2.13
LINC01116-201ENST00000295549 CHMP4BQ9H444 224 aaKnown RBP28.37■■■□□ 2.13
LINC01116-201ENST00000295549 EPHA10Q5JZY3 1008 aa28.36■■■□□ 2.13
LINC01116-201ENST00000295549 LAMB2P55268 1798 aa28.36■■■□□ 2.13
LINC01116-201ENST00000295549 RBM17Q96I25 401 aaKnown RBP28.35■■■□□ 2.13
LINC01116-201ENST00000295549 RABL6Q3YEC7 729 aaPredicted RBP28.35■■■□□ 2.13
LINC01116-201ENST00000295549 ZNF622Q969S3 477 aaKnown RBP eCLIP28.35■■■□□ 2.13
LINC01116-201ENST00000295549 CRAMP1Q96RY5 1269 aa28.35■■■□□ 2.13
LINC01116-201ENST00000295549 BICC1Q9H694 974 aaKnown RBP28.35■■■□□ 2.13
LINC01116-201ENST00000295549 PIM2Q9P1W9 311 aa28.35■■■□□ 2.13
LINC01116-201ENST00000295549 KIAA1551Q9HCM1 1747 aa28.34■■■□□ 2.13
LINC01116-201ENST00000295549 GNAI2P04899 355 aa28.34■■■□□ 2.13
LINC01116-201ENST00000295549 ALDH1B1P30837 517 aa28.34■■■□□ 2.13
LINC01116-201ENST00000295549 DDX46Q7L014 1031 aaKnown RBP28.34■■■□□ 2.13
LINC01116-201ENST00000295549 LRRFIP2Q9Y608 721 aaKnown RBP28.34■■■□□ 2.13
LINC01116-201ENST00000295549 RTL9Q8NET4 1388 aa28.33■■■□□ 2.13
LINC01116-201ENST00000295549 LMBR1LQ6UX01 489 aa28.33■■■□□ 2.13
LINC01116-201ENST00000295549 CNKSR1Q969H4 720 aa28.33■■■□□ 2.13
LINC01116-201ENST00000295549 ANKRD44Q8N8A2 993 aa28.32■■■□□ 2.12
LINC01116-201ENST00000295549 ZBTB40Q9NUA8 1239 aa28.32■■■□□ 2.12
LINC01116-201ENST00000295549 TTLL6Q8N841 843 aa28.31■■■□□ 2.12
LINC01116-201ENST00000295549 GREM2Q9H772 168 aa28.31■■■□□ 2.12
LINC01116-201ENST00000295549 COL11A2P13942 1736 aaPredicted RBP28.3■■■□□ 2.12
LINC01116-201ENST00000295549 CCDC85AQ96PX6 553 aaPredicted RBP28.3■■■□□ 2.12
LINC01116-201ENST00000295549 GRAPQ13588 217 aa28.28■■■□□ 2.12
LINC01116-201ENST00000295549 FAM161AQ3B820 660 aa28.28■■■□□ 2.12
LINC01116-201ENST00000295549 DALRD3Q5D0E6 543 aaKnown RBP28.28■■■□□ 2.12
LINC01116-201ENST00000295549 GRAPLQ8TC17 118 aaPredicted RBP28.28■■■□□ 2.12
LINC01116-201ENST00000295549 SEC31BQ9NQW1 1179 aa28.28■■■□□ 2.12
LINC01116-201ENST00000295549 BBOX1O75936 387 aa28.27■■■□□ 2.12
LINC01116-201ENST00000295549 ITGA6P23229 1130 aa28.27■■■□□ 2.12
LINC01116-201ENST00000295549 DLEC1Q9Y238 1755 aa28.27■■■□□ 2.12
LINC01116-201ENST00000295549 IFIT5Q13325 482 aaKnown RBP28.26■■■□□ 2.12
LINC01116-201ENST00000295549 MTX1Q13505 466 aa28.26■■■□□ 2.12
LINC01116-201ENST00000295549 PRPF40BQ6NWY9 871 aaKnown RBP28.26■■■□□ 2.12
LINC01116-201ENST00000295549 CRBNQ96SW2 442 aa28.26■■■□□ 2.12
LINC01116-201ENST00000295549 CHMP3Q9Y3E7 222 aa28.26■■■□□ 2.12
LINC01116-201ENST00000295549 MYH3P11055 1940 aa28.26■■■□□ 2.11
LINC01116-201ENST00000295549 GOLGB1Q14789 3259 aaKnown RBP28.26■■■□□ 2.11
LINC01116-201ENST00000295549 CCDC57Q2TAC2 916 aa28.26■■■□□ 2.11
LINC01116-201ENST00000295549 CDC5LQ99459 802 aaKnown RBP28.26■■■□□ 2.11
LINC01116-201ENST00000295549 ANKRD18BA2A2Z9 1011 aa28.25■■■□□ 2.11
LINC01116-201ENST00000295549 RPS8P62241 208 aaKnown RBP28.25■■■□□ 2.11
LINC01116-201ENST00000295549 CELF1Q92879 486 aaKnown RBP28.25■■■□□ 2.11
LINC01116-201ENST00000295549 TMC4Q7Z404 712 aa28.24■■■□□ 2.11
LINC01116-201ENST00000295549 C1orf115Q9H7X2 142 aa28.24■■■□□ 2.11
LINC01116-201ENST00000295549 BCS1LQ9Y276 419 aa28.23■■■□□ 2.11
LINC01116-201ENST00000295549 AAMPQ13685 434 aa28.22■■■□□ 2.11
LINC01116-201ENST00000295549 ANKRD18AQ8IVF6 992 aa28.22■■■□□ 2.11
LINC01116-201ENST00000295549 C7orf43Q8WVR3 580 aa28.22■■■□□ 2.11
LINC01116-201ENST00000295549 BRCA1P38398 1863 aaKnown RBP28.21■■■□□ 2.11
LINC01116-201ENST00000295549 WWC3Q9ULE0 1092 aa28.21■■■□□ 2.11
LINC01116-201ENST00000295549 PPEF1O14829 653 aaPredicted RBP28.2■■■□□ 2.11
LINC01116-201ENST00000295549 ATP8B2P98198 1209 aa28.2■■■□□ 2.11
LINC01116-201ENST00000295549 BSDC1Q9NW68 430 aaPredicted RBP28.2■■■□□ 2.11
LINC01116-201ENST00000295549 SRGAP3O43295 1099 aa28.19■■■□□ 2.1
LINC01116-201ENST00000295549 IGHMBP2P38935 993 aaKnown RBP28.19■■■□□ 2.1
LINC01116-201ENST00000295549 RFX5P48382 616 aaPredicted RBP28.19■■■□□ 2.1
LINC01116-201ENST00000295549 ATP6V0A2Q9Y487 856 aa28.19■■■□□ 2.1
LINC01116-201ENST00000295549 CEP85Q6P2H3 762 aa28.18■■■□□ 2.1
LINC01116-201ENST00000295549 RPAP2Q8IXW5 612 aaPredicted RBP28.18■■■□□ 2.1
LINC01116-201ENST00000295549 SP8Q8IXZ3 490 aa28.18■■■□□ 2.1
LINC01116-201ENST00000295549 SOGA3Q5TF21 947 aa28.18■■■□□ 2.1
LINC01116-201ENST00000295549 CC2D2BQ6DHV5 1058 aa28.18■■■□□ 2.1
LINC01116-201ENST00000295549 MPHOSPH8Q99549 860 aa28.18■■■□□ 2.1
LINC01116-201ENST00000295549 SLX4Q8IY92 1834 aa28.17■■■□□ 2.1
LINC01116-201ENST00000295549 PNMA6EA0A0J9YXQ4 647 aa28.17■■■□□ 2.1
LINC01116-201ENST00000295549 C21orf2O43822 256 aa28.17■■■□□ 2.1
LINC01116-201ENST00000295549 TAF7LQ5H9L4 462 aa28.17■■■□□ 2.1
LINC01116-201ENST00000295549 EXOC6Q8TAG9 804 aa28.17■■■□□ 2.1
LINC01116-201ENST00000295549 COL4A1P02462 1669 aa28.16■■■□□ 2.1
LINC01116-201ENST00000295549 YBX3P16989 372 aaKnown RBP eCLIP28.16■■■□□ 2.1
LINC01116-201ENST00000295549 PTPN12Q05209 780 aaKnown RBP28.16■■■□□ 2.1
LINC01116-201ENST00000295549 POLA2Q14181 598 aa28.16■■■□□ 2.1
LINC01116-201ENST00000295549 SSH3Q8TE77 659 aa28.16■■■□□ 2.1
LINC01116-201ENST00000295549 ZNF594Q96JF6 807 aaPredicted RBP28.16■■■□□ 2.1
LINC01116-201ENST00000295549 IRX6P78412 446 aaPredicted RBP28.15■■■□□ 2.1
LINC01116-201ENST00000295549 TMX4Q9H1E5 349 aaPredicted RBP28.15■■■□□ 2.1
LINC01116-201ENST00000295549 COPRSQ9NQ92 184 aa28.15■■■□□ 2.1
LINC01116-201ENST00000295549 GPR162Q16538 588 aa28.14■■■□□ 2.1
LINC01116-201ENST00000295549 GRIPAP1Q4V328 841 aa28.14■■■□□ 2.1
LINC01116-201ENST00000295549 LDHAL6AQ6ZMR3 332 aa28.14■■■□□ 2.1
LINC01116-201ENST00000295549 PELP1Q8IZL8 1130 aaKnown RBP28.14■■■□□ 2.1
LINC01116-201ENST00000295549 ZNF219Q9P2Y4 722 aaPredicted RBP28.14■■■□□ 2.1
LINC01116-201ENST00000295549 TAF1P21675 1872 aa28.13■■■□□ 2.09
LINC01116-201ENST00000295549 KLHDC4Q8TBB5 520 aa28.13■■■□□ 2.09
LINC01116-201ENST00000295549 FBXO3Q9UK99 471 aa28.13■■■□□ 2.09
LINC01116-201ENST00000295549 UTRNP46939 3433 aa28.13■■■□□ 2.09
LINC01116-201ENST00000295549 CCDC93Q567U6 631 aa28.12■■■□□ 2.09
LINC01116-201ENST00000295549 OLFM4Q6UX06 510 aa28.12■■■□□ 2.09
LINC01116-201ENST00000295549 MINPP1Q9UNW1 487 aa28.12■■■□□ 2.09
LINC01116-201ENST00000295549 SIRT2Q8IXJ6 389 aa28.11■■■□□ 2.09
LINC01116-201ENST00000295549 RTKN2Q8IZC4 609 aa28.11■■■□□ 2.09
LINC01116-201ENST00000295549 CNNM1Q9NRU3 951 aa28.11■■■□□ 2.09
LINC01116-201ENST00000295549 GRIN3BO60391 1043 aa28.1■■■□□ 2.09
LINC01116-201ENST00000295549 HMMRO75330 724 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms