RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 COL24A1Q17RW2 1714 aa14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 RFX5P48382 616 aaPredicted RBP14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 RABL6Q3YEC7 729 aaPredicted RBP14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 NBPF5PQ86XG9 351 aaPredicted RBP14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 SMC5Q8IY18 1101 aa14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 OTUD7AQ8TE49 926 aaPredicted RBP14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 LNPKQ9C0E8 428 aa14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 CHMP4BQ9H444 224 aaKnown RBP14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 SH3TC1Q8TE82 1336 aa14.17□□□□□ -0.14
CHRNB3-201ENST00000289957 TNRC6CQ9HCJ0 1690 aaKnown RBP14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 DCTPP1Q9H773 170 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 CASZ1Q86V15 1759 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 PSDA5PKW4 1024 aaPredicted RBP14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 TM4SF1P30408 202 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 MTX1Q13505 466 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 ANKRD45Q5TZF3 282 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 TBC1D32Q96NH3 1257 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 PUS3Q9BZE2 481 aaKnown RBP14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
CHRNB3-201ENST00000289957 POLRMTO00411 1230 aaKnown RBP14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 SLC4A3P48751 1232 aa14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 PARP10Q53GL7 1025 aa14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 CTSWP56202 376 aa14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 PTPN12Q05209 780 aaKnown RBP14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 R3HDM1Q15032 1099 aaKnown RBP14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 PRR5LQ6MZQ0 368 aa14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 IL1RAPL2Q9NP60 686 aa14.15□□□□□ -0.14
CHRNB3-201ENST00000289957 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
CHRNB3-201ENST00000289957 CDHR2Q9BYE9 1310 aa14.14□□□□□ -0.15
CHRNB3-201ENST00000289957 MMP10P09238 476 aa14.14□□□□□ -0.15
CHRNB3-201ENST00000289957 UPF2Q9HAU5 1272 aaKnown RBP14.14□□□□□ -0.15
CHRNB3-201ENST00000289957 MYH3P11055 1940 aa14.14□□□□□ -0.15
CHRNB3-201ENST00000289957 SERPINB2P05120 415 aa14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 GTF2E1P29083 439 aaPredicted RBP14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 LRRC24Q50LG9 513 aa14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 CCDC125Q86Z20 511 aa14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 ZBTB7AO95365 584 aa14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 CSF1RP07333 972 aa14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 LAMB2P55268 1798 aa14.13□□□□□ -0.15
CHRNB3-201ENST00000289957 PDE8AO60658 829 aa14.12□□□□□ -0.15
CHRNB3-201ENST00000289957 ITGA6P23229 1130 aa14.12□□□□□ -0.15
CHRNB3-201ENST00000289957 NUCB1Q02818 461 aa14.12□□□□□ -0.15
CHRNB3-201ENST00000289957 PLA2G12BQ9BX93 195 aa14.12□□□□□ -0.15
CHRNB3-201ENST00000289957 NPHP1O15259 732 aa14.12□□□□□ -0.15
CHRNB3-201ENST00000289957 SASH1O94885 1247 aa14.12□□□□□ -0.15
CHRNB3-201ENST00000289957 CNBD1Q8NA66 436 aa14.12□□□□□ -0.15
CHRNB3-201ENST00000289957 WTIPA6NIX2 430 aaPredicted RBP14.11□□□□□ -0.15
CHRNB3-201ENST00000289957 HMMRO75330 724 aa14.11□□□□□ -0.15
CHRNB3-201ENST00000289957 CHD1LQ86WJ1 897 aa14.11□□□□□ -0.15
CHRNB3-201ENST00000289957 SNAP23O00161 211 aa14.11□□□□□ -0.15
CHRNB3-201ENST00000289957 SEC24BO95487 1268 aa14.11□□□□□ -0.15
CHRNB3-201ENST00000289957 TPTE2Q6XPS3 522 aa14.11□□□□□ -0.15
CHRNB3-201ENST00000289957 SPEF2Q9C093 1822 aa14.1□□□□□ -0.15
CHRNB3-201ENST00000289957 ATG9AQ7Z3C6 839 aa14.1□□□□□ -0.15
CHRNB3-201ENST00000289957 ANTXR1Q9H6X2 564 aa14.1□□□□□ -0.15
CHRNB3-201ENST00000289957 GCC1Q96CN9 775 aa14.1□□□□□ -0.15
CHRNB3-201ENST00000289957 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
CHRNB3-201ENST00000289957 FRAT2O75474 233 aaPredicted RBP14.09□□□□□ -0.15
CHRNB3-201ENST00000289957 OS9Q13438 667 aaPredicted RBP14.09□□□□□ -0.15
CHRNB3-201ENST00000289957 NLGN1Q8N2Q7 840 aa14.09□□□□□ -0.15
CHRNB3-201ENST00000289957 FLAD1Q8NFF5 587 aa14.09□□□□□ -0.15
CHRNB3-201ENST00000289957 RHPN1Q8TCX5 695 aa14.09□□□□□ -0.15
CHRNB3-201ENST00000289957 TLR7Q9NYK1 1049 aaKnown RBP14.09□□□□□ -0.15
CHRNB3-201ENST00000289957 ANKRD31Q8N7Z5 1873 aa14.09□□□□□ -0.15
CHRNB3-201ENST00000289957 QSER1Q2KHR3 1735 aa14.08□□□□□ -0.15
CHRNB3-201ENST00000289957 TFCP2Q12800 502 aa14.08□□□□□ -0.15
CHRNB3-201ENST00000289957 IFIT5Q13325 482 aaKnown RBP14.08□□□□□ -0.15
CHRNB3-201ENST00000289957 CCDC57Q2TAC2 916 aa14.08□□□□□ -0.15
CHRNB3-201ENST00000289957 HELBQ8NG08 1087 aaPredicted RBP14.08□□□□□ -0.15
CHRNB3-201ENST00000289957 CELF1Q92879 486 aaKnown RBP14.08□□□□□ -0.15
CHRNB3-201ENST00000289957 RGL2O15211 777 aa14.08□□□□□ -0.16
CHRNB3-201ENST00000289957 NYXQ9GZU5 481 aa14.08□□□□□ -0.16
CHRNB3-201ENST00000289957 COPRSQ9NQ92 184 aa14.08□□□□□ -0.16
CHRNB3-201ENST00000289957 SLC10A5Q5PT55 438 aa14.07□□□□□ -0.16
CHRNB3-201ENST00000289957 LRRCC1Q9C099 1032 aa14.07□□□□□ -0.16
CHRNB3-201ENST00000289957 IL27Q8NEV9 243 aa14.07□□□□□ -0.16
CHRNB3-201ENST00000289957 WWC3Q9ULE0 1092 aa14.07□□□□□ -0.16
CHRNB3-201ENST00000289957 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 TAF7LQ5H9L4 462 aa14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 OLFM4Q6UX06 510 aa14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 EAF2Q96CJ1 260 aaPredicted RBP14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 NLRP3Q96P20 1036 aa14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 CCDC8Q9H0W5 538 aaPredicted RBP14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 HDAC5Q9UQL6 1122 aa14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 RIC1Q4ADV7 1423 aa14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 NRXN2Q9P2S2 1712 aa14.06□□□□□ -0.16
CHRNB3-201ENST00000289957 ANKRD18BA2A2Z9 1011 aa14.05□□□□□ -0.16
CHRNB3-201ENST00000289957 TAF5LO75529 589 aa14.05□□□□□ -0.16
CHRNB3-201ENST00000289957 SF3B3Q15393 1217 aaKnown RBP14.05□□□□□ -0.16
CHRNB3-201ENST00000289957 CCDC152Q4G0S7 254 aa14.05□□□□□ -0.16
CHRNB3-201ENST00000289957 LDHAL6AQ6ZMR3 332 aa14.05□□□□□ -0.16
CHRNB3-201ENST00000289957 PARP3Q9Y6F1 533 aa14.05□□□□□ -0.16
CHRNB3-201ENST00000289957 EYA2O00167 538 aa14.04□□□□□ -0.16
CHRNB3-201ENST00000289957 PLEKHM2Q8IWE5 1019 aa14.04□□□□□ -0.16
CHRNB3-201ENST00000289957 RIPOR2Q9Y4F9 1068 aa14.04□□□□□ -0.16
CHRNB3-201ENST00000289957 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
CHRNB3-201ENST00000289957 CHRNA5P30532 468 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms