RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 PCCAP05165 728 aaPredicted RBP11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 MTX1Q13505 466 aa11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 TBC1D32Q96NH3 1257 aa11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 MYH3P11055 1940 aa11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 CLEC4GQ6UXB4 293 aa11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
LRTOMT-201ENST00000289488 IBTKQ9P2D0 1353 aaPredicted RBP11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 IRS4O14654 1257 aaPredicted RBP11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 ZNF594Q96JF6 807 aaPredicted RBP11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 PANK2Q9BZ23 570 aa11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 NTSR2O95665 410 aa11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 GYS1P13807 737 aa11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 MCM4P33991 863 aa11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 COL23A1Q86Y22 540 aaPredicted RBP11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 PDGFDQ9GZP0 370 aaPredicted RBP11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 IL1RAPL2Q9NP60 686 aa11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 TAF1P21675 1872 aa11.88□□□□□ -0.51
LRTOMT-201ENST00000289488 SSFA2P28290 1259 aa11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 MRE11P49959 708 aa11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 ERFEQ4G0M1 354 aa11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 RGPD3A6NKT7 1758 aaPredicted RBP11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 RGPD4Q7Z3J3 1758 aa11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 DDX60Q8IY21 1712 aaKnown RBP11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 RFX5P48382 616 aaPredicted RBP11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 PTPN12Q05209 780 aaKnown RBP11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 NFIXQ14938 502 aa11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
LRTOMT-201ENST00000289488 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 TSHZ3Q63HK5 1081 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 C3orf67Q6ZVT6 689 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 GREM2Q9H772 168 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 HDAC5Q9UQL6 1122 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 CASZ1Q86V15 1759 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 ADRA2BP18089 450 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 PARP10Q53GL7 1025 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 ISY1Q9ULR0 285 aaKnown RBP11.86□□□□□ -0.51
LRTOMT-201ENST00000289488 BAG6P46379 1132 aa11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 MSL1Q68DK7 614 aa11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 NBPF5PQ86XG9 351 aaPredicted RBP11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 LRRCC1Q9C099 1032 aa11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 ABCC12Q96J65 1359 aa11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 CDHR2Q9BYE9 1310 aa11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 COL4A1P02462 1669 aa11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 CTSWP56202 376 aa11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 PUS3Q9BZE2 481 aaKnown RBP11.85□□□□□ -0.51
LRTOMT-201ENST00000289488 SASH1O94885 1247 aa11.84□□□□□ -0.51
LRTOMT-201ENST00000289488 CSF1RP07333 972 aa11.84□□□□□ -0.51
LRTOMT-201ENST00000289488 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
LRTOMT-201ENST00000289488 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
LRTOMT-201ENST00000289488 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
LRTOMT-201ENST00000289488 CHMP5Q9NZZ3 219 aa11.84□□□□□ -0.51
LRTOMT-201ENST00000289488 COL24A1Q17RW2 1714 aa11.84□□□□□ -0.51
LRTOMT-201ENST00000289488 TRAK2O60296 914 aa11.83□□□□□ -0.51
LRTOMT-201ENST00000289488 PDE8AO60658 829 aa11.83□□□□□ -0.51
LRTOMT-201ENST00000289488 ITGA6P23229 1130 aa11.83□□□□□ -0.51
LRTOMT-201ENST00000289488 SLC15A2Q16348 729 aa11.83□□□□□ -0.51
LRTOMT-201ENST00000289488 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.51
LRTOMT-201ENST00000289488 ESPNB1AK53 854 aa11.83□□□□□ -0.52
LRTOMT-201ENST00000289488 DDR1Q08345 913 aa11.83□□□□□ -0.52
LRTOMT-201ENST00000289488 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
LRTOMT-201ENST00000289488 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
LRTOMT-201ENST00000289488 NPHP1O15259 732 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 GRPEL1Q9HAV7 217 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 COPRSQ9NQ92 184 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 SPEF2Q9C093 1822 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 G3BP1Q13283 466 aaKnown RBP eCLIP11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 ATG9AQ7Z3C6 839 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 LAMB2P55268 1798 aa11.82□□□□□ -0.52
LRTOMT-201ENST00000289488 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 TPM2P07951 284 aa11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 TM4SF1P30408 202 aa11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 TFCP2Q12800 502 aa11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 TPTE2Q6XPS3 522 aa11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 SLC51AQ86UW1 340 aa11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 KIF1BPQ96EK5 621 aa11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 TLR7Q9NYK1 1049 aaKnown RBP11.81□□□□□ -0.52
LRTOMT-201ENST00000289488 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
LRTOMT-201ENST00000289488 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
LRTOMT-201ENST00000289488 CNBD1Q8NA66 436 aa11.8□□□□□ -0.52
LRTOMT-201ENST00000289488 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
LRTOMT-201ENST00000289488 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
LRTOMT-201ENST00000289488 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
LRTOMT-201ENST00000289488 RGL2O15211 777 aa11.8□□□□□ -0.52
LRTOMT-201ENST00000289488 SERPINB2P05120 415 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms