RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 MARCH10Q8NA82 808 aaPredicted RBP21.99■■□□□ 1.11
PDLIM3-201ENST00000284767 INTS4Q96HW7 963 aaKnown RBP21.99■■□□□ 1.11
PDLIM3-201ENST00000284767 HLFQ16534 295 aa21.99■■□□□ 1.11
PDLIM3-201ENST00000284767 CYP19A1P11511 503 aaPredicted RBP21.98■■□□□ 1.11
PDLIM3-201ENST00000284767 CCDC191Q8NCU4 936 aa21.98■■□□□ 1.11
PDLIM3-201ENST00000284767 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.98■■□□□ 1.11
PDLIM3-201ENST00000284767 DOT1LQ8TEK3 1739 aa21.98■■□□□ 1.11
PDLIM3-201ENST00000284767 CCDC85AQ96PX6 553 aaPredicted RBP21.98■■□□□ 1.11
PDLIM3-201ENST00000284767 BOLA2Q9H3K6 86 aa21.98■■□□□ 1.11
PDLIM3-201ENST00000284767 TCIRG1Q13488 830 aa21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 SYNE4Q8N205 404 aa21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 ZNF594Q96JF6 807 aaPredicted RBP21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 TEX13AQ9BXU3 409 aaPredicted RBP21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 SPATA31A5Q5VU36 1347 aa21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 SPATA31A7Q8IWB4 1347 aa21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 IL17RAQ96F46 866 aa21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 ISCA1Q9BUE6 129 aa21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 ZMYND15Q9H091 742 aa21.97■■□□□ 1.11
PDLIM3-201ENST00000284767 GPTP24298 496 aa21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 SYAP1Q96A49 352 aaPredicted RBP21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 GPATCH3Q96I76 525 aa21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 MAP7D2Q96T17 732 aa21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 NSFL1CQ9UNZ2 370 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 R3HCC1Q9Y3T6 440 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 NDUFB9Q9Y6M9 179 aa21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 COL15A1P39059 1388 aa21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 KIF6Q6ZMV9 814 aa21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 EDC3Q96F86 508 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-201ENST00000284767 SGSM2O43147 1006 aa21.95■■□□□ 1.11
PDLIM3-201ENST00000284767 C8orf37Q96NL8 207 aa21.95■■□□□ 1.11
PDLIM3-201ENST00000284767 DBNLQ9UJU6 430 aaKnown RBP21.95■■□□□ 1.11
PDLIM3-201ENST00000284767 TNNI3KQ59H18 835 aa21.94■■□□□ 1.1
PDLIM3-201ENST00000284767 PKNOX2Q96KN3 472 aa21.94■■□□□ 1.1
PDLIM3-201ENST00000284767 FPGT-TNNI3KV9GXZ4 949 aa21.94■■□□□ 1.1
PDLIM3-201ENST00000284767 TBC1D2BQ9UPU7 963 aa21.94■■□□□ 1.1
PDLIM3-201ENST00000284767 LRP6O75581 1613 aa21.94■■□□□ 1.1
PDLIM3-201ENST00000284767 THRAP3Q9Y2W1 955 aaKnown RBP21.94■■□□□ 1.1
PDLIM3-201ENST00000284767 SLIT2O94813 1529 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 FAM98CQ17RN3 349 aaKnown RBP21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 LRRC24Q50LG9 513 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 CHAMP1Q96JM3 812 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 MAP3K15Q6ZN16 1313 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 KCNQ2O43526 872 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 DBNDD2Q9BQY9 259 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 TSPY26PQ9H489 355 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 DIAPH3Q9NSV4 1193 aa21.93■■□□□ 1.1
PDLIM3-201ENST00000284767 EPB41L2O43491 1005 aaKnown RBP21.92■■□□□ 1.1
PDLIM3-201ENST00000284767 ATG9AQ7Z3C6 839 aa21.92■■□□□ 1.1
PDLIM3-201ENST00000284767 CDCA7Q9BWT1 371 aaPredicted RBP21.92■■□□□ 1.1
PDLIM3-201ENST00000284767 PHF14O94880 888 aa21.92■■□□□ 1.1
PDLIM3-201ENST00000284767 PUS3Q9BZE2 481 aaKnown RBP21.92■■□□□ 1.1
PDLIM3-201ENST00000284767 UPF3BQ9BZI7 483 aaKnown RBP21.92■■□□□ 1.1
PDLIM3-201ENST00000284767 FOXD4L5Q5VV16 416 aaPredicted RBP21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 GIGYF2Q6Y7W6 1299 aaKnown RBP21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 FOXD4L4Q8WXT5 416 aaPredicted RBP21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 FAM227BQ96M60 508 aa21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 LSG1Q9H089 658 aaKnown RBP21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 NOL8Q76FK4 1167 aaKnown RBP21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 EVI5LQ96CN4 794 aa21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 NGLY1Q96IV0 654 aa21.91■■□□□ 1.1
PDLIM3-201ENST00000284767 CHGBP05060 677 aa21.9■■□□□ 1.1
PDLIM3-201ENST00000284767 UQCRHLA0A096LP55 91 aa21.89■■□□□ 1.09
PDLIM3-201ENST00000284767 UQCRHP07919 91 aa21.89■■□□□ 1.09
PDLIM3-201ENST00000284767 PTH1RQ03431 593 aa21.89■■□□□ 1.09
PDLIM3-201ENST00000284767 RAD50Q92878 1312 aa21.89■■□□□ 1.09
PDLIM3-201ENST00000284767 ATP6V1AP38606 617 aa21.89■■□□□ 1.09
PDLIM3-201ENST00000284767 TIMM10P62072 90 aa21.89■■□□□ 1.09
PDLIM3-201ENST00000284767 HSPA4P34932 840 aa21.88■■□□□ 1.09
PDLIM3-201ENST00000284767 DYNC1I1O14576 645 aa21.88■■□□□ 1.09
PDLIM3-201ENST00000284767 NLRP10Q86W26 655 aa21.88■■□□□ 1.09
PDLIM3-201ENST00000284767 RASEFQ8IZ41 740 aa21.88■■□□□ 1.09
PDLIM3-201ENST00000284767 NEUROD6Q96NK8 337 aa21.88■■□□□ 1.09
PDLIM3-201ENST00000284767 TRIM28Q13263 835 aaKnown RBP21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 NMIQ13287 307 aaPredicted RBP21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 ITPK1Q13572 414 aa21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 BARGINQ6ZT62 677 aa21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 MTERF4Q7Z6M4 381 aaKnown RBP21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 DZIP3Q86Y13 1208 aaKnown RBP21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 RNF214Q8ND24 703 aa21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 FSD1Q9BTV5 496 aa21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 WDR33Q9C0J8 1336 aaKnown RBP21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 SASS6Q6UVJ0 657 aa21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 FAM184AQ8NB25 1140 aa21.87■■□□□ 1.09
PDLIM3-201ENST00000284767 A0A0D9SFI3 127 aa21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 PCCAP05165 728 aaPredicted RBP21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 KCNQ4P56696 695 aa21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 ZBTB38Q8NAP3 1195 aaPredicted RBP21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 DNAJC2Q99543 621 aaKnown RBP21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 SIK1P57059 783 aa21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 RBM10P98175 930 aaKnown RBP21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 INTS5Q6P9B9 1019 aaKnown RBP21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 PTF1AQ7RTS3 328 aa21.86■■□□□ 1.09
PDLIM3-201ENST00000284767 EYA2O00167 538 aa21.85■■□□□ 1.09
PDLIM3-201ENST00000284767 UVSSAQ2YD98 709 aa21.85■■□□□ 1.09
PDLIM3-201ENST00000284767 BCL9LQ86UU0 1499 aa21.85■■□□□ 1.09
PDLIM3-201ENST00000284767 NWD2Q9ULI1 1742 aa21.85■■□□□ 1.09
PDLIM3-201ENST00000284767 CRKLP46109 303 aaKnown RBP21.85■■□□□ 1.09
PDLIM3-201ENST00000284767 UBN2Q6ZU65 1347 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms