RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 ALDH1L1O75891 902 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 CCDC173Q0VFZ6 552 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 MTX1Q13505 466 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 ZNF772Q68DY9 489 aaPredicted RBP9.61□□□□□ -0.87
PRKCA-201ENST00000284384 SSH3Q8TE77 659 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 CCDC102AQ96A19 550 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 ORAI2Q96SN7 254 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 KIF2CQ99661 725 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 DBF4Q9UBU7 674 aaPredicted RBP9.61□□□□□ -0.87
PRKCA-201ENST00000284384 ARFGEF2Q9Y6D5 1785 aa9.61□□□□□ -0.87
PRKCA-201ENST00000284384 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.6□□□□□ -0.87
PRKCA-201ENST00000284384 OFD1O75665 1012 aa9.6□□□□□ -0.87
PRKCA-201ENST00000284384 ATF3P18847 181 aa9.6□□□□□ -0.87
PRKCA-201ENST00000284384 AFDNP55196 1824 aaKnown RBP9.6□□□□□ -0.87
PRKCA-201ENST00000284384 COL15A1P39059 1388 aa9.6□□□□□ -0.87
PRKCA-201ENST00000284384 SHANK3Q9BYB0 1731 aa9.6□□□□□ -0.87
PRKCA-201ENST00000284384 BTBD11A6QL63 1104 aa9.6□□□□□ -0.87
PRKCA-201ENST00000284384 UBTFL1P0CB47 393 aaPredicted RBP9.6□□□□□ -0.87
PRKCA-201ENST00000284384 SKOR2Q2VWA4 1001 aaPredicted RBP9.6□□□□□ -0.87
PRKCA-201ENST00000284384 GAS2L3Q86XJ1 694 aa9.6□□□□□ -0.87
PRKCA-201ENST00000284384 GBP4Q96PP9 640 aa9.6□□□□□ -0.87
PRKCA-201ENST00000284384 RGS17Q9UGC6 210 aaPredicted RBP9.6□□□□□ -0.87
PRKCA-201ENST00000284384 PDE1AP54750 535 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 SLC4A10Q6U841 1118 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 KCNB2Q92953 911 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
PRKCA-201ENST00000284384 USP42Q9H9J4 1324 aaKnown RBP9.59□□□□□ -0.87
PRKCA-201ENST00000284384 PLCH1Q4KWH8 1693 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
PRKCA-201ENST00000284384 EIF3JO75822 258 aaKnown RBP9.59□□□□□ -0.87
PRKCA-201ENST00000284384 TERF1P54274 439 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 AMHR2Q16671 573 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 C11orf96Q7Z7L8 435 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 NOP9Q86U38 636 aaKnown RBP9.59□□□□□ -0.87
PRKCA-201ENST00000284384 USP44Q9H0E7 712 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 HYPKQ9NX55 129 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 UTYO14607 1347 aa9.59□□□□□ -0.87
PRKCA-201ENST00000284384 ADCY9O60503 1353 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
PRKCA-201ENST00000284384 TLDC2A0PJX2 215 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 F6X3S4 739 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 SDSP20132 328 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 NASPP49321 788 aaPredicted RBP9.58□□□□□ -0.88
PRKCA-201ENST00000284384 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 USHBP1Q8N6Y0 703 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 DNAAF4Q8WXU2 420 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 SNRKQ9NRH2 765 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 GNL3LQ9NVN8 582 aaKnown RBP9.58□□□□□ -0.88
PRKCA-201ENST00000284384 HSP90AB1P08238 724 aaKnown RBP9.58□□□□□ -0.88
PRKCA-201ENST00000284384 SSFA2P28290 1259 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 BEND3Q5T5X7 828 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 CLEC17AQ6ZS10 378 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 SDR16C5Q8N3Y7 309 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
PRKCA-201ENST00000284384 R3HCC1Q9Y3T6 440 aaKnown RBP9.58□□□□□ -0.88
PRKCA-201ENST00000284384 MEGF6O75095 1541 aa9.58□□□□□ -0.88
PRKCA-201ENST00000284384 ERC2O15083 957 aa9.57□□□□□ -0.88
PRKCA-201ENST00000284384 WDHD1O75717 1129 aaPredicted RBP9.57□□□□□ -0.88
PRKCA-201ENST00000284384 RECKO95980 971 aa9.57□□□□□ -0.88
PRKCA-201ENST00000284384 MX1P20591 662 aa9.57□□□□□ -0.88
PRKCA-201ENST00000284384 ZNF622Q969S3 477 aaKnown RBP eCLIP9.57□□□□□ -0.884e-7■■□□□ 13.3
PRKCA-201ENST00000284384 USP26Q9BXU7 913 aa9.57□□□□□ -0.88
PRKCA-201ENST00000284384 SPG7Q9UQ90 795 aa9.57□□□□□ -0.88
PRKCA-201ENST00000284384 GIGYF1O75420 1035 aaPredicted RBP9.57□□□□□ -0.88
PRKCA-201ENST00000284384 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
PRKCA-201ENST00000284384 TMX4Q9H1E5 349 aaPredicted RBP9.57□□□□□ -0.88
PRKCA-201ENST00000284384 SPATA31A3Q5VYP0 1347 aa9.57□□□□□ -0.88
PRKCA-201ENST00000284384 WNK3Q9BYP7 1800 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 TMEM88BA6NKF7 163 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 EXOC5O00471 708 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 CLGNO14967 610 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 DDX58O95786 925 aaKnown RBP9.56□□□□□ -0.88
PRKCA-201ENST00000284384 MCM2P49736 904 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 MTERF4Q7Z6M4 381 aaKnown RBP9.56□□□□□ -0.88
PRKCA-201ENST00000284384 TNPO1Q92973 898 aaKnown RBP9.56□□□□□ -0.88
PRKCA-201ENST00000284384 GDPD2Q9HCC8 539 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 LRP6O75581 1613 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 RHBDL3P58872 404 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 C4orf46Q504U0 113 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 ERC1Q8IUD2 1116 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 SMAP1Q8IYB5 467 aaPredicted RBP9.56□□□□□ -0.88
PRKCA-201ENST00000284384 RAPGEF4Q8WZA2 1011 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 KIF1BPQ96EK5 621 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 PPP1R9BQ96SB3 815 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 LGR6Q9HBX8 967 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 LRRFIP2Q9Y608 721 aaKnown RBP9.56□□□□□ -0.88
PRKCA-201ENST00000284384 TTC41PQ6P2S7 1318 aa9.56□□□□□ -0.88
PRKCA-201ENST00000284384 TATP17735 454 aaPredicted RBP9.55□□□□□ -0.88
PRKCA-201ENST00000284384 BDNFP23560 247 aa9.55□□□□□ -0.88
PRKCA-201ENST00000284384 KSR2Q6VAB6 950 aa9.55□□□□□ -0.88
PRKCA-201ENST00000284384 LRRC59Q96AG4 307 aaKnown RBP9.55□□□□□ -0.88
PRKCA-201ENST00000284384 GPR37O15354 613 aa9.55□□□□□ -0.88
PRKCA-201ENST00000284384 ST18O60284 1047 aa9.55□□□□□ -0.88
PRKCA-201ENST00000284384 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
PRKCA-201ENST00000284384 RAB3GAP1Q15042 981 aa9.55□□□□□ -0.88
PRKCA-201ENST00000284384 SDE2Q6IQ49 451 aa9.55□□□□□ -0.88
PRKCA-201ENST00000284384 SLC52A2Q9HAB3 445 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms