RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 COL15A1P39059 1388 aa13.41□□□□□ -0.26
GGPS1-201ENST00000282841 ATRNO75882 1429 aa13.41□□□□□ -0.26
GGPS1-201ENST00000282841 CD2BP2O95400 341 aaKnown RBP13.41□□□□□ -0.26
GGPS1-201ENST00000282841 ZNF34Q8IZ26 560 aa13.41□□□□□ -0.26
GGPS1-201ENST00000282841 ITGA6P23229 1130 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
GGPS1-201ENST00000282841 KIF2CQ99661 725 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 TBC1D2Q9BYX2 928 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
GGPS1-201ENST00000282841 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 NUP98P52948 1817 aa13.4□□□□□ -0.26
GGPS1-201ENST00000282841 ONECUT3O60422 494 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-201ENST00000282841 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
GGPS1-201ENST00000282841 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
GGPS1-201ENST00000282841 CASC1Q6TDU7 716 aa13.39□□□□□ -0.27
GGPS1-201ENST00000282841 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
GGPS1-201ENST00000282841 USP26Q9BXU7 913 aa13.39□□□□□ -0.27
GGPS1-201ENST00000282841 BTAF1O14981 1849 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 ERVV-1B6SEH8 477 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 ADORA1P30542 326 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 TBC1D9BQ66K14 1250 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 EYA2O00167 538 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 CTSWP56202 376 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 HSP90AB3PQ58FF7 597 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 SNRKQ9NRH2 765 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 ERC2O15083 957 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
GGPS1-201ENST00000282841 LDHAL6AQ6ZMR3 332 aa13.38□□□□□ -0.27
GGPS1-201ENST00000282841 WTIPA6NIX2 430 aaPredicted RBP13.37□□□□□ -0.27
GGPS1-201ENST00000282841 ERFEQ4G0M1 354 aa13.37□□□□□ -0.27
GGPS1-201ENST00000282841 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
GGPS1-201ENST00000282841 SLC51AQ86UW1 340 aa13.37□□□□□ -0.27
GGPS1-201ENST00000282841 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
GGPS1-201ENST00000282841 FAM227BQ96M60 508 aa13.37□□□□□ -0.27
GGPS1-201ENST00000282841 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
GGPS1-201ENST00000282841 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
GGPS1-201ENST00000282841 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
GGPS1-201ENST00000282841 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
GGPS1-201ENST00000282841 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
GGPS1-201ENST00000282841 TAF5LO75529 589 aa13.36□□□□□ -0.27
GGPS1-201ENST00000282841 GTF2E1P29083 439 aaPredicted RBP13.36□□□□□ -0.27
GGPS1-201ENST00000282841 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
GGPS1-201ENST00000282841 PI16Q6UXB8 463 aa13.36□□□□□ -0.27
GGPS1-201ENST00000282841 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
GGPS1-201ENST00000282841 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
GGPS1-201ENST00000282841 SH3TC1Q8TE82 1336 aa13.36□□□□□ -0.27
GGPS1-201ENST00000282841 CSF1RP07333 972 aa13.36□□□□□ -0.27
GGPS1-201ENST00000282841 RBM10P98175 930 aaKnown RBP13.36□□□□□ -0.27
GGPS1-201ENST00000282841 NOL8Q76FK4 1167 aaKnown RBP13.35□□□□□ -0.27
GGPS1-201ENST00000282841 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
GGPS1-201ENST00000282841 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
GGPS1-201ENST00000282841 PDE8AO60658 829 aa13.35□□□□□ -0.27
GGPS1-201ENST00000282841 NTSR2O95665 410 aa13.35□□□□□ -0.27
GGPS1-201ENST00000282841 METTL24Q5JXM2 366 aa13.35□□□□□ -0.27
GGPS1-201ENST00000282841 FSD1Q9BTV5 496 aa13.35□□□□□ -0.27
GGPS1-201ENST00000282841 TTC41PQ6P2S7 1318 aa13.35□□□□□ -0.27
GGPS1-201ENST00000282841 ZPR1O75312 459 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 IL15P40933 162 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-201ENST00000282841 ANKRD18BA2A2Z9 1011 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 AK7Q96M32 723 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 ANTXR1Q9H6X2 564 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 DIAPH3Q9NSV4 1193 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 GOLIM4O00461 696 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 PROM2Q8N271 834 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 SEC62Q99442 399 aaKnown RBP13.34□□□□□ -0.27
GGPS1-201ENST00000282841 BRWD3Q6RI45 1802 aa13.34□□□□□ -0.27
GGPS1-201ENST00000282841 NPHP1O15259 732 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 DTNBO60941 627 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
GGPS1-201ENST00000282841 SCARF1Q14162 830 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 GORABQ5T7V8 394 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 AOX1Q06278 1338 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 USP42Q9H9J4 1324 aaKnown RBP13.33□□□□□ -0.28
GGPS1-201ENST00000282841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
GGPS1-201ENST00000282841 A0A0D9SFI3 127 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 REC8O95072 547 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 RFC4P35249 363 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 PTH1RQ03431 593 aa13.33□□□□□ -0.28
GGPS1-201ENST00000282841 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-201ENST00000282841 CDHR2Q9BYE9 1310 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 CCDC129Q6ZRS4 1044 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 LARP6Q9BRS8 491 aaKnown RBP13.32□□□□□ -0.28
GGPS1-201ENST00000282841 PLA2G12BQ9BX93 195 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 CNTNAP4Q9C0A0 1308 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 BECN1Q14457 450 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
GGPS1-201ENST00000282841 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 RIPOR2Q9Y4F9 1068 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 TAF1P21675 1872 aa13.32□□□□□ -0.28
GGPS1-201ENST00000282841 TUBGCP6Q96RT7 1819 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 575.7 ms