RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 USPL1Q5W0Q7 1092 aa9.31□□□□□ -0.92
EPHA4-201ENST00000281821 COPRSQ9NQ92 184 aa9.31□□□□□ -0.92
EPHA4-201ENST00000281821 GOLGA6L4A6NEF3 574 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 DPP8Q6V1X1 898 aaPredicted RBP9.3□□□□□ -0.92
EPHA4-201ENST00000281821 BRIP1Q9BX63 1249 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 EIF5P55010 431 aaKnown RBP9.3□□□□□ -0.92
EPHA4-201ENST00000281821 MPNDQ8N594 471 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 ZBTB40Q9NUA8 1239 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 ANXA1P04083 346 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 CRNKL1Q9BZJ0 848 aaKnown RBP9.3□□□□□ -0.92
EPHA4-201ENST00000281821 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
EPHA4-201ENST00000281821 BEND3Q5T5X7 828 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 C2CD5Q86YS7 1000 aa9.3□□□□□ -0.92
EPHA4-201ENST00000281821 PDCP20941 246 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 TRIM29Q14134 588 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 CCDC93Q567U6 631 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 NIM1KQ8IY84 436 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 GRIN3BO60391 1043 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 TNFAIP1Q13829 316 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 RABEP1Q15276 862 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 BMP2KLQ5H9B9 411 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 MASTLQ96GX5 879 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 MEIS3Q99687 375 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 PHAXQ9H814 394 aaKnown RBP9.29□□□□□ -0.92
EPHA4-201ENST00000281821 RBM5P52756 815 aaKnown RBP eCLIP9.29□□□□□ -0.92
EPHA4-201ENST00000281821 CTSWP56202 376 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 HMG20BQ9P0W2 317 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 NRKQ7Z2Y5 1582 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 XDHP47989 1333 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 MAP4K4O95819 1239 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-201ENST00000281821 FKBP4Q02790 459 aaKnown RBP eCLIP9.29□□□□□ -0.92
EPHA4-201ENST00000281821 TNIP1Q15025 636 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 IMMTQ16891 758 aaKnown RBP9.29□□□□□ -0.92
EPHA4-201ENST00000281821 SMC5Q8IY18 1101 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 EXOC6BQ9Y2D4 811 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 IDH1O75874 414 aaKnown RBP9.29□□□□□ -0.92
EPHA4-201ENST00000281821 CDKL5O76039 1030 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
EPHA4-201ENST00000281821 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
EPHA4-201ENST00000281821 ITGA6P23229 1130 aa9.28□□□□□ -0.92
EPHA4-201ENST00000281821 SAFBQ15424 915 aaKnown RBP eCLIP9.28□□□□□ -0.92
EPHA4-201ENST00000281821 SLC15A2Q16348 729 aa9.28□□□□□ -0.92
EPHA4-201ENST00000281821 BRMS1Q9HCU9 246 aa9.28□□□□□ -0.92
EPHA4-201ENST00000281821 CCDC196A0A1B0GTZ2 297 aa9.28□□□□□ -0.92
EPHA4-201ENST00000281821 CHAF1AQ13111 956 aaPredicted RBP9.28□□□□□ -0.92
EPHA4-201ENST00000281821 SSH3Q8TE77 659 aa9.28□□□□□ -0.92
EPHA4-201ENST00000281821 MYO3BQ8WXR4 1341 aa9.28□□□□□ -0.92
EPHA4-201ENST00000281821 HIBADHP31937 336 aaKnown RBP9.28□□□□□ -0.92
EPHA4-201ENST00000281821 MTX1Q13505 466 aa9.28□□□□□ -0.92
EPHA4-201ENST00000281821 CEP85Q6P2H3 762 aa9.27□□□□□ -0.92
EPHA4-201ENST00000281821 NLRP10Q86W26 655 aa9.27□□□□□ -0.92
EPHA4-201ENST00000281821 FAM89AQ96GI7 184 aa9.27□□□□□ -0.92
EPHA4-201ENST00000281821 ZSCAN31Q96LW9 406 aaPredicted RBP9.27□□□□□ -0.92
EPHA4-201ENST00000281821 SLIT2O94813 1529 aa9.27□□□□□ -0.92
EPHA4-201ENST00000281821 ZBTB7BO15156 539 aaPredicted RBP9.27□□□□□ -0.93
EPHA4-201ENST00000281821 TDO2P48775 406 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 TTLL6Q8N841 843 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 CWC22Q9HCG8 908 aaKnown RBP9.27□□□□□ -0.93
EPHA4-201ENST00000281821 CABP5Q9NP86 173 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 PNMA2Q9UL42 364 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 COL14A1Q05707 1796 aaKnown RBP9.27□□□□□ -0.93
EPHA4-201ENST00000281821 MYO5BQ9ULV0 1848 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 TTC6Q86TZ1 520 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 PIM2Q9P1W9 311 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 PDE4BQ07343 736 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 TCEAL9Q9UHQ7 104 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 BCL9O00512 1426 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 CWF19L2Q2TBE0 894 aaKnown RBP9.27□□□□□ -0.93
EPHA4-201ENST00000281821 GBP4Q96PP9 640 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 CRAMP1Q96RY5 1269 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 PLA2G12BQ9BX93 195 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
EPHA4-201ENST00000281821 H7C1W4 665 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 USP5P45974 858 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 ISCA1Q9BUE6 129 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 SH2D4AQ9H788 454 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 MMP10P09238 476 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 CRACR2BQ8N4Y2 399 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-201ENST00000281821 FAM184AQ8NB25 1140 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 MTFR1LQ9H019 292 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 NAPBQ9H115 298 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 TAOK2Q9UL54 1235 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 IBTKQ9P2D0 1353 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-201ENST00000281821 UFL1O94874 794 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 GRAPQ13588 217 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
EPHA4-201ENST00000281821 NFXL1Q6ZNB6 911 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 TMTC2Q8N394 836 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 GRAPLQ8TC17 118 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-201ENST00000281821 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
EPHA4-201ENST00000281821 C16orf71Q8IYS4 520 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-201ENST00000281821 WASF1Q92558 559 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 ZSCAN29Q8IWY8 852 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-201ENST00000281821 UBAC1Q9BSL1 405 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 CNNM2Q9H8M5 875 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 IL1RAPL2Q9NP60 686 aa9.26□□□□□ -0.93
EPHA4-201ENST00000281821 IQCA1Q86XH1 822 aa9.25□□□□□ -0.93
EPHA4-201ENST00000281821 LDHBP07195 334 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms