RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 CHAMP1Q96JM3 812 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
SEC16A-201ENST00000277537 DBNLQ9UJU6 430 aaKnown RBP10.69□□□□□ -0.7
SEC16A-201ENST00000277537 SNX14Q9Y5W7 946 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 NCAPD2Q15021 1401 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
SEC16A-201ENST00000277537 CCDC171Q6TFL3 1326 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 PKP1Q13835 747 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 ANKRD1Q15327 319 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 AIDAQ96BJ3 306 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 RAI14Q9P0K7 980 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 KRT32Q14532 448 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 PDIA6Q15084 440 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 VSIG10Q8N0Z9 540 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 A0A0D9SFI3 127 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 PTPN12Q05209 780 aaKnown RBP10.68□□□□□ -0.7
SEC16A-201ENST00000277537 CHAF1AQ13111 956 aaPredicted RBP10.68□□□□□ -0.7
SEC16A-201ENST00000277537 RAB3GAP1Q15042 981 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 MCMDC2Q4G0Z9 681 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 SYNE3Q6ZMZ3 975 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 PI4K2BQ8TCG2 481 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
SEC16A-201ENST00000277537 GJB2P29033 226 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 RASEFQ8IZ41 740 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 ZSCAN31Q96LW9 406 aaPredicted RBP10.67□□□□□ -0.7
SEC16A-201ENST00000277537 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 AOX1Q06278 1338 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 BRF1Q92994 677 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
SEC16A-201ENST00000277537 MEGF6O75095 1541 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 KNDC1Q76NI1 1749 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 RAD50Q92878 1312 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 TAF5LO75529 589 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 PDCP20941 246 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 MRE11P49959 708 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 GUCY1B3Q02153 619 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
SEC16A-201ENST00000277537 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
SEC16A-201ENST00000277537 CPLX2Q6PUV4 134 aaKnown RBP10.67□□□□□ -0.7
SEC16A-201ENST00000277537 UTP14AQ9BVJ6 771 aaKnown RBP10.67□□□□□ -0.7
SEC16A-201ENST00000277537 COPRSQ9NQ92 184 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 ATG3Q9NT62 314 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 RGS12O14924 1447 aa10.67□□□□□ -0.7
SEC16A-201ENST00000277537 SOS2Q07890 1332 aaPredicted RBP10.67□□□□□ -0.7
SEC16A-201ENST00000277537 TMX4Q9H1E5 349 aaPredicted RBP10.66□□□□□ -0.7
SEC16A-201ENST00000277537 RBM27Q9P2N5 1060 aaKnown RBP10.66□□□□□ -0.7
SEC16A-201ENST00000277537 SLC5A1P13866 664 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 HLFQ16534 295 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 SLC9C2Q5TAH2 1124 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 HSPA4P34932 840 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 TDO2P48775 406 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 NASPP49321 788 aaPredicted RBP10.66□□□□□ -0.7
SEC16A-201ENST00000277537 DRC7Q8IY82 874 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 PEAK1Q9H792 1746 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 CTNNA3Q9UI47 895 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 PIK3C2AO00443 1686 aa10.66□□□□□ -0.7
SEC16A-201ENST00000277537 MSNP26038 577 aaKnown RBP10.65□□□□□ -0.7
SEC16A-201ENST00000277537 ZSCAN25Q6NSZ9 544 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 CCDC87Q9NVE4 849 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 GNL3LQ9NVN8 582 aaKnown RBP10.65□□□□□ -0.7
SEC16A-201ENST00000277537 SYCE3A1L190 88 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 STX6O43752 255 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 NBPF5PQ86XG9 351 aaPredicted RBP10.65□□□□□ -0.7
SEC16A-201ENST00000277537 KIF2CQ99661 725 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 GRPEL1Q9HAV7 217 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 TFIP11Q9UBB9 837 aaKnown RBP10.65□□□□□ -0.7
SEC16A-201ENST00000277537 SH3TC1Q8TE82 1336 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 LOC102724428A0A0B4J2F2 783 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 SIK1P57059 783 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 CCDC152Q4G0S7 254 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 MPNDQ8N594 471 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 GREM2Q9H772 168 aa10.65□□□□□ -0.7
SEC16A-201ENST00000277537 ERICH2A1L162 156 aa10.65□□□□□ -0.71
SEC16A-201ENST00000277537 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.71
SEC16A-201ENST00000277537 ZNF213O14771 459 aa10.65□□□□□ -0.71
SEC16A-201ENST00000277537 MBD3O95983 291 aa10.65□□□□□ -0.71
SEC16A-201ENST00000277537 SMARCC1Q92922 1105 aaPredicted RBP10.65□□□□□ -0.71
SEC16A-201ENST00000277537 SH2B1Q9NRF2 756 aaPredicted RBP10.65□□□□□ -0.71
SEC16A-201ENST00000277537 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
SEC16A-201ENST00000277537 ERBB4Q15303 1308 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 SLC27A2O14975 620 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 GNPATO15228 680 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 ATP5JP18859 108 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 MTX1Q13505 466 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 ADCK5Q3MIX3 580 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 GIGYF2Q6Y7W6 1299 aaKnown RBP10.64□□□□□ -0.71
SEC16A-201ENST00000277537 CCDC82Q8N4S0 544 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 AKAP12Q02952 1782 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 ADORA1P30542 326 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 MAP3K12Q12852 859 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 Q6ZUG5 572 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
SEC16A-201ENST00000277537 USP21Q9UK80 565 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 MAP3K15Q6ZN16 1313 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 RFC4P35249 363 aa10.64□□□□□ -0.71
SEC16A-201ENST00000277537 ZBTB38Q8NAP3 1195 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms