RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 SERPINB2P05120 415 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 ANKRD45Q5TZF3 282 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 ZNF594Q96JF6 807 aaPredicted RBP12.59□□□□□ -0.39
LCN2-201ENST00000277480 NYXQ9GZU5 481 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 GREM2Q9H772 168 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 COPRSQ9NQ92 184 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 CHMP3Q9Y3E7 222 aa12.59□□□□□ -0.39
LCN2-201ENST00000277480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
LCN2-201ENST00000277480 TPTE2Q6XPS3 522 aa12.58□□□□□ -0.4
LCN2-201ENST00000277480 CHD1LQ86WJ1 897 aa12.58□□□□□ -0.4
LCN2-201ENST00000277480 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
LCN2-201ENST00000277480 LNPKQ9C0E8 428 aa12.58□□□□□ -0.4
LCN2-201ENST00000277480 LAMB2P55268 1798 aa12.58□□□□□ -0.4
LCN2-201ENST00000277480 COL4A1P02462 1669 aa12.57□□□□□ -0.4
LCN2-201ENST00000277480 SASH1O94885 1247 aa12.57□□□□□ -0.4
LCN2-201ENST00000277480 C16orf71Q8IYS4 520 aaPredicted RBP12.57□□□□□ -0.4
LCN2-201ENST00000277480 SIL1Q9H173 461 aa12.57□□□□□ -0.4
LCN2-201ENST00000277480 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
LCN2-201ENST00000277480 RAB11FIP3O75154 756 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 MMP10P09238 476 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 ITGA6P23229 1130 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 SF3B3Q15393 1217 aaKnown RBP12.56□□□□□ -0.4
LCN2-201ENST00000277480 LRRC24Q50LG9 513 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 OTUD7AQ8TE49 926 aaPredicted RBP12.56□□□□□ -0.4
LCN2-201ENST00000277480 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
LCN2-201ENST00000277480 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
LCN2-201ENST00000277480 RIC1Q4ADV7 1423 aa12.55□□□□□ -0.4
LCN2-201ENST00000277480 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
LCN2-201ENST00000277480 RGS3P49796 1198 aa12.55□□□□□ -0.4
LCN2-201ENST00000277480 IFIT5Q13325 482 aaKnown RBP12.55□□□□□ -0.4
LCN2-201ENST00000277480 CCDC57Q2TAC2 916 aa12.55□□□□□ -0.4
LCN2-201ENST00000277480 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
LCN2-201ENST00000277480 LRRCC1Q9C099 1032 aa12.55□□□□□ -0.4
LCN2-201ENST00000277480 LRP5O75197 1615 aa12.55□□□□□ -0.4
LCN2-201ENST00000277480 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
LCN2-201ENST00000277480 ANKRD18BA2A2Z9 1011 aa12.54□□□□□ -0.4
LCN2-201ENST00000277480 G3BP1Q13283 466 aaKnown RBP eCLIP12.54□□□□□ -0.4
LCN2-201ENST00000277480 CCDC152Q4G0S7 254 aa12.54□□□□□ -0.4
LCN2-201ENST00000277480 IL1RAPL2Q9NP60 686 aa12.54□□□□□ -0.4
LCN2-201ENST00000277480 SALL3Q9BXA9 1300 aa12.54□□□□□ -0.4
LCN2-201ENST00000277480 EYA2O00167 538 aa12.53□□□□□ -0.4
LCN2-201ENST00000277480 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
LCN2-201ENST00000277480 OS9Q13438 667 aaPredicted RBP12.53□□□□□ -0.4
LCN2-201ENST00000277480 R3HDM1Q15032 1099 aaKnown RBP12.53□□□□□ -0.4
LCN2-201ENST00000277480 HSP90AB4PQ58FF6 505 aa12.53□□□□□ -0.4
LCN2-201ENST00000277480 KIF1BPQ96EK5 621 aa12.53□□□□□ -0.4
LCN2-201ENST00000277480 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
LCN2-201ENST00000277480 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
LCN2-201ENST00000277480 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
LCN2-201ENST00000277480 CASZ1Q86V15 1759 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 CIAO1O76071 339 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 ST5P78524 1137 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 TFCP2Q12800 502 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 MYH3P11055 1940 aa12.52□□□□□ -0.41
LCN2-201ENST00000277480 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
LCN2-201ENST00000277480 NPHP1O15259 732 aa12.51□□□□□ -0.41
LCN2-201ENST00000277480 IL15P40933 162 aaPredicted RBP12.51□□□□□ -0.41
LCN2-201ENST00000277480 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
LCN2-201ENST00000277480 TAF7LQ5H9L4 462 aa12.51□□□□□ -0.41
LCN2-201ENST00000277480 SLC51AQ86UW1 340 aa12.51□□□□□ -0.41
LCN2-201ENST00000277480 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
LCN2-201ENST00000277480 CELF1Q92879 486 aaKnown RBP12.51□□□□□ -0.41
LCN2-201ENST00000277480 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
LCN2-201ENST00000277480 ZBTB7AO95365 584 aa12.5□□□□□ -0.41
LCN2-201ENST00000277480 LDHAL6AQ6ZMR3 332 aa12.5□□□□□ -0.41
LCN2-201ENST00000277480 EAF2Q96CJ1 260 aaPredicted RBP12.5□□□□□ -0.41
LCN2-201ENST00000277480 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
LCN2-201ENST00000277480 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
LCN2-201ENST00000277480 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
LCN2-201ENST00000277480 TSHZ3Q63HK5 1081 aa12.49□□□□□ -0.41
LCN2-201ENST00000277480 VGLL2Q8N8G2 317 aa12.49□□□□□ -0.41
LCN2-201ENST00000277480 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
LCN2-201ENST00000277480 CNNM1Q9NRU3 951 aa12.49□□□□□ -0.41
LCN2-201ENST00000277480 ZNF609O15014 1411 aa12.48□□□□□ -0.41
LCN2-201ENST00000277480 IGHMBP2P38935 993 aaKnown RBP12.48□□□□□ -0.41
LCN2-201ENST00000277480 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
LCN2-201ENST00000277480 AACSQ86V21 672 aa12.48□□□□□ -0.41
LCN2-201ENST00000277480 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
LCN2-201ENST00000277480 CCDC8Q9H0W5 538 aaPredicted RBP12.48□□□□□ -0.41
LCN2-201ENST00000277480 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
LCN2-201ENST00000277480 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
LCN2-201ENST00000277480 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
LCN2-201ENST00000277480 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
LCN2-201ENST00000277480 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
LCN2-201ENST00000277480 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
LCN2-201ENST00000277480 PDE1AP54750 535 aa12.47□□□□□ -0.41
LCN2-201ENST00000277480 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
LCN2-201ENST00000277480 GRAPQ13588 217 aa12.47□□□□□ -0.41
LCN2-201ENST00000277480 METTL24Q5JXM2 366 aa12.47□□□□□ -0.41
LCN2-201ENST00000277480 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
LCN2-201ENST00000277480 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
LCN2-201ENST00000277480 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
LCN2-201ENST00000277480 GRAPLQ8TC17 118 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms