RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 TFCP2Q12800 502 aa17.8■□□□□ 0.44
TRIM23-202ENST00000274327 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
TRIM23-202ENST00000274327 ZNF594Q96JF6 807 aaPredicted RBP17.8■□□□□ 0.44
TRIM23-202ENST00000274327 ECHDC1Q9NTX5 307 aa17.8■□□□□ 0.44
TRIM23-202ENST00000274327 TNNI3KQ59H18 835 aa17.79■□□□□ 0.44
TRIM23-202ENST00000274327 SMIM5Q71RC9 77 aa17.79■□□□□ 0.44
TRIM23-202ENST00000274327 AMIGO3Q86WK7 504 aa17.79■□□□□ 0.44
TRIM23-202ENST00000274327 IPO9Q96P70 1041 aaKnown RBP17.79■□□□□ 0.44
TRIM23-202ENST00000274327 FPGT-TNNI3KV9GXZ4 949 aa17.79■□□□□ 0.44
TRIM23-202ENST00000274327 EIF5BO60841 1220 aaKnown RBP17.79■□□□□ 0.44
TRIM23-202ENST00000274327 GLRX3O76003 335 aaKnown RBP17.79■□□□□ 0.44
TRIM23-202ENST00000274327 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
TRIM23-202ENST00000274327 CCDC8Q9H0W5 538 aaPredicted RBP17.79■□□□□ 0.44
TRIM23-202ENST00000274327 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
TRIM23-202ENST00000274327 ERC2O15083 957 aa17.78■□□□□ 0.44
TRIM23-202ENST00000274327 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
TRIM23-202ENST00000274327 LRRC24Q50LG9 513 aa17.78■□□□□ 0.44
TRIM23-202ENST00000274327 USPL1Q5W0Q7 1092 aa17.78■□□□□ 0.44
TRIM23-202ENST00000274327 LRP5O75197 1615 aa17.78■□□□□ 0.44
TRIM23-202ENST00000274327 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
TRIM23-202ENST00000274327 GREM2Q9H772 168 aa17.77■□□□□ 0.44
TRIM23-202ENST00000274327 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
TRIM23-202ENST00000274327 PUS3Q9BZE2 481 aaKnown RBP17.77■□□□□ 0.43
TRIM23-202ENST00000274327 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.43
TRIM23-202ENST00000274327 SRP68Q9UHB9 627 aaKnown RBP17.77■□□□□ 0.43
TRIM23-202ENST00000274327 CASZ1Q86V15 1759 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 ANKRD18BA2A2Z9 1011 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 TRIM6-TRIM34B2RNG4 842 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 ZPR1O75312 459 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
TRIM23-202ENST00000274327 ADRA2BP18089 450 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 ITGA6P23229 1130 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 TBC1D9BQ66K14 1250 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 CASC1Q6TDU7 716 aa17.76■□□□□ 0.43
TRIM23-202ENST00000274327 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
TRIM23-202ENST00000274327 ZNF609O15014 1411 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 FAM177BA6PVY3 158 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 TRAPPC3LQ5T215 181 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 POTEAQ6S8J7 498 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 RILPL2Q969X0 211 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 DDRGK1Q96HY6 314 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 DBNLQ9UJU6 430 aaKnown RBP17.75■□□□□ 0.43
TRIM23-202ENST00000274327 RTL9Q8NET4 1388 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
TRIM23-202ENST00000274327 HCLS1P14317 486 aaPredicted RBP17.75■□□□□ 0.43
TRIM23-202ENST00000274327 RBM25P49756 843 aaKnown RBP17.75■□□□□ 0.43
TRIM23-202ENST00000274327 PROM2Q8N271 834 aa17.75■□□□□ 0.43
TRIM23-202ENST00000274327 PLSCR1O15162 318 aa17.74■□□□□ 0.43
TRIM23-202ENST00000274327 CHMLP26374 656 aa17.74■□□□□ 0.43
TRIM23-202ENST00000274327 HMGB2P26583 209 aaKnown RBP17.74■□□□□ 0.43
TRIM23-202ENST00000274327 TXNRD1Q16881 649 aa17.74■□□□□ 0.43
TRIM23-202ENST00000274327 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
TRIM23-202ENST00000274327 CNTROBQ8N137 903 aa17.74■□□□□ 0.43
TRIM23-202ENST00000274327 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
TRIM23-202ENST00000274327 RIPOR2Q9Y4F9 1068 aa17.73■□□□□ 0.43
TRIM23-202ENST00000274327 RGPD3A6NKT7 1758 aaPredicted RBP17.73■□□□□ 0.43
TRIM23-202ENST00000274327 RGPD4Q7Z3J3 1758 aa17.73■□□□□ 0.43
TRIM23-202ENST00000274327 MAP4K4O95819 1239 aaPredicted RBP17.72■□□□□ 0.43
TRIM23-202ENST00000274327 RFC4P35249 363 aa17.72■□□□□ 0.43
TRIM23-202ENST00000274327 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
TRIM23-202ENST00000274327 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
TRIM23-202ENST00000274327 EP400Q96L91 3159 aa17.72■□□□□ 0.43
TRIM23-202ENST00000274327 ATP5JP18859 108 aa17.72■□□□□ 0.43
TRIM23-202ENST00000274327 ERFEQ4G0M1 354 aa17.72■□□□□ 0.43
TRIM23-202ENST00000274327 CEP126Q9P2H0 1117 aa17.72■□□□□ 0.43
TRIM23-202ENST00000274327 PHF14O94880 888 aa17.71■□□□□ 0.43
TRIM23-202ENST00000274327 SSFA2P28290 1259 aa17.71■□□□□ 0.43
TRIM23-202ENST00000274327 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
TRIM23-202ENST00000274327 ESYT1Q9BSJ8 1104 aa17.71■□□□□ 0.43
TRIM23-202ENST00000274327 NYXQ9GZU5 481 aa17.71■□□□□ 0.43
TRIM23-202ENST00000274327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
TRIM23-202ENST00000274327 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
TRIM23-202ENST00000274327 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
TRIM23-202ENST00000274327 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
TRIM23-202ENST00000274327 EVI5LQ96CN4 794 aa17.7■□□□□ 0.42
TRIM23-202ENST00000274327 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
TRIM23-202ENST00000274327 USP26Q9BXU7 913 aa17.7■□□□□ 0.42
TRIM23-202ENST00000274327 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
TRIM23-202ENST00000274327 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
TRIM23-202ENST00000274327 ABCC12Q96J65 1359 aa17.69■□□□□ 0.42
TRIM23-202ENST00000274327 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
TRIM23-202ENST00000274327 APBA3O96018 575 aa17.69■□□□□ 0.42
TRIM23-202ENST00000274327 TIMM10P62072 90 aa17.69■□□□□ 0.42
TRIM23-202ENST00000274327 BOLA2Q9H3K6 86 aa17.69■□□□□ 0.42
TRIM23-202ENST00000274327 VGLL2Q8N8G2 317 aa17.68■□□□□ 0.42
TRIM23-202ENST00000274327 REC8O95072 547 aa17.68■□□□□ 0.42
TRIM23-202ENST00000274327 METTL24Q5JXM2 366 aa17.68■□□□□ 0.42
TRIM23-202ENST00000274327 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
TRIM23-202ENST00000274327 SEC31BQ9NQW1 1179 aa17.68■□□□□ 0.42
TRIM23-202ENST00000274327 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
TRIM23-202ENST00000274327 ARAP2Q8WZ64 1704 aa17.67■□□□□ 0.42
TRIM23-202ENST00000274327 C3orf67Q6ZVT6 689 aa17.67■□□□□ 0.42
TRIM23-202ENST00000274327 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
TRIM23-202ENST00000274327 COL4A1P02462 1669 aa17.67■□□□□ 0.42
TRIM23-202ENST00000274327 NFIXQ14938 502 aa17.66■□□□□ 0.42
TRIM23-202ENST00000274327 TPTE2Q6XPS3 522 aa17.66■□□□□ 0.42
TRIM23-202ENST00000274327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRIM23-202ENST00000274327 HAUS7Q99871 368 aa17.66■□□□□ 0.42
TRIM23-202ENST00000274327 MROH5Q6ZUA9 1318 aa17.66■□□□□ 0.42
TRIM23-202ENST00000274327 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms