RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 ZNF213O14771 459 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 NAP1L5Q96NT1 182 aaPredicted RBP13.16□□□□□ -0.3
SFXN5-201ENST00000272433 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 CDC42BPGQ6DT37 1551 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 MED14O60244 1454 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 PDCP20941 246 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 KRT32Q14532 448 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
SFXN5-201ENST00000272433 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
SFXN5-201ENST00000272433 NSFL1CQ9UNZ2 370 aaKnown RBP13.16□□□□□ -0.3
SFXN5-201ENST00000272433 BRPF1P55201 1214 aaPredicted RBP13.15□□□□□ -0.3
SFXN5-201ENST00000272433 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
SFXN5-201ENST00000272433 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
SFXN5-201ENST00000272433 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
SFXN5-201ENST00000272433 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
SFXN5-201ENST00000272433 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
SFXN5-201ENST00000272433 DZIP1Q86YF9 867 aaKnown RBP13.15□□□□□ -0.3
SFXN5-201ENST00000272433 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
SFXN5-201ENST00000272433 SAFBQ15424 915 aaKnown RBP eCLIP13.15□□□□□ -0.3
SFXN5-201ENST00000272433 ZSCAN29Q8IWY8 852 aaPredicted RBP13.15□□□□□ -0.31
SFXN5-201ENST00000272433 UBAC1Q9BSL1 405 aa13.15□□□□□ -0.31
SFXN5-201ENST00000272433 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.31
SFXN5-201ENST00000272433 WDR33Q9C0J8 1336 aaKnown RBP13.14□□□□□ -0.31
SFXN5-201ENST00000272433 MPNDQ8N594 471 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
SFXN5-201ENST00000272433 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 BRF1Q92994 677 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 CCDC69A6NI79 296 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
SFXN5-201ENST00000272433 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 TTC41PQ6P2S7 1318 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 TNS3Q68CZ2 1445 aa13.14□□□□□ -0.31
SFXN5-201ENST00000272433 F8W031 263 aaPredicted RBP13.13□□□□□ -0.31
SFXN5-201ENST00000272433 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
SFXN5-201ENST00000272433 MCMDC2Q4G0Z9 681 aa13.13□□□□□ -0.31
SFXN5-201ENST00000272433 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
SFXN5-201ENST00000272433 TLR7Q9NYK1 1049 aaKnown RBP13.13□□□□□ -0.31
SFXN5-201ENST00000272433 KDRP35968 1356 aa13.13□□□□□ -0.31
SFXN5-201ENST00000272433 USP5P45974 858 aa13.13□□□□□ -0.31
SFXN5-201ENST00000272433 BECN2A8MW95 431 aa13.12□□□□□ -0.31
SFXN5-201ENST00000272433 KCNQ2O43526 872 aa13.12□□□□□ -0.31
SFXN5-201ENST00000272433 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
SFXN5-201ENST00000272433 SDF4Q9BRK5 362 aa13.12□□□□□ -0.31
SFXN5-201ENST00000272433 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
SFXN5-201ENST00000272433 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
SFXN5-201ENST00000272433 ZSCAN31Q96LW9 406 aaPredicted RBP13.12□□□□□ -0.31
SFXN5-201ENST00000272433 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
SFXN5-201ENST00000272433 IGKV5-2P06315 115 aa13.12□□□□□ -0.31
SFXN5-201ENST00000272433 EPHA10Q5JZY3 1008 aa13.12□□□□□ -0.31
SFXN5-201ENST00000272433 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
SFXN5-201ENST00000272433 CYP7A1P22680 504 aa13.11□□□□□ -0.31
SFXN5-201ENST00000272433 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
SFXN5-201ENST00000272433 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
SFXN5-201ENST00000272433 PDE8AO60658 829 aa13.11□□□□□ -0.31
SFXN5-201ENST00000272433 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
SFXN5-201ENST00000272433 POLR1AO95602 1720 aaPredicted RBP13.11□□□□□ -0.31
SFXN5-201ENST00000272433 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
SFXN5-201ENST00000272433 SEC62Q99442 399 aaKnown RBP13.11□□□□□ -0.31
SFXN5-201ENST00000272433 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
SFXN5-201ENST00000272433 ME1P48163 572 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 IFIT3O14879 490 aaKnown RBP13.1□□□□□ -0.31
SFXN5-201ENST00000272433 STK38Q15208 465 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 HLFQ16534 295 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 GREM2Q9H772 168 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 FER1L4A9Z1Z3 1794 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 POLR3DP05423 398 aaPredicted RBP13.1□□□□□ -0.31
SFXN5-201ENST00000272433 GJB2P29033 226 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 CREB3L3Q68CJ9 461 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
SFXN5-201ENST00000272433 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 TRIM37O94972 964 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 MAGEB6Q8N7X4 407 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 GOLGA6L6A8MZA4 724 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 GOLGA6L19H0YKK7 550 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 PES1O00541 588 aaKnown RBP13.09□□□□□ -0.31
SFXN5-201ENST00000272433 RIMBP2O15034 1052 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 AK2P54819 239 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 KRT85P78386 507 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 CRB1P82279 1406 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 UQCRFS1P1P0C7P4 283 aa13.09□□□□□ -0.31
SFXN5-201ENST00000272433 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
SFXN5-201ENST00000272433 IBTKQ9P2D0 1353 aaPredicted RBP13.09□□□□□ -0.31
SFXN5-201ENST00000272433 SNAP23O00161 211 aa13.08□□□□□ -0.31
SFXN5-201ENST00000272433 SGSM2O43147 1006 aa13.08□□□□□ -0.31
SFXN5-201ENST00000272433 ZAP70P43403 619 aa13.08□□□□□ -0.31
SFXN5-201ENST00000272433 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.31
SFXN5-201ENST00000272433 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.31
SFXN5-201ENST00000272433 TRIM22Q8IYM9 498 aa13.08□□□□□ -0.31
SFXN5-201ENST00000272433 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
SFXN5-201ENST00000272433 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
SFXN5-201ENST00000272433 ST5P78524 1137 aa13.08□□□□□ -0.32
SFXN5-201ENST00000272433 NBPF14Q5TI25 921 aa13.08□□□□□ -0.32
SFXN5-201ENST00000272433 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms