RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 USP48Q86UV5 1035 aa13.3□□□□□ -0.28
SYCP3-201ENST00000266743 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
SYCP3-201ENST00000266743 TRPA1O75762 1119 aa13.29□□□□□ -0.28
SYCP3-201ENST00000266743 CRY2Q49AN0 593 aa13.29□□□□□ -0.28
SYCP3-201ENST00000266743 C3orf67Q6ZVT6 689 aa13.29□□□□□ -0.28
SYCP3-201ENST00000266743 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
SYCP3-201ENST00000266743 HHIPL1Q96JK4 782 aa13.29□□□□□ -0.28
SYCP3-201ENST00000266743 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
SYCP3-201ENST00000266743 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
SYCP3-201ENST00000266743 DIAPH1O60610 1272 aaKnown RBP13.28□□□□□ -0.28
SYCP3-201ENST00000266743 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
SYCP3-201ENST00000266743 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
SYCP3-201ENST00000266743 NOGQ13253 232 aa13.28□□□□□ -0.28
SYCP3-201ENST00000266743 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
SYCP3-201ENST00000266743 KNSTRNQ9Y448 316 aa13.28□□□□□ -0.28
SYCP3-201ENST00000266743 FAM155AB1AL88 458 aaPredicted RBP13.27□□□□□ -0.29
SYCP3-201ENST00000266743 PPEF1O14829 653 aaPredicted RBP13.27□□□□□ -0.29
SYCP3-201ENST00000266743 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.29
SYCP3-201ENST00000266743 RAD17O75943 681 aa13.27□□□□□ -0.29
SYCP3-201ENST00000266743 CNGB1Q14028 1251 aaPredicted RBP13.27□□□□□ -0.29
SYCP3-201ENST00000266743 TMEM106CQ9BVX2 250 aa13.27□□□□□ -0.29
SYCP3-201ENST00000266743 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
SYCP3-201ENST00000266743 PGAP2Q9UHJ9 254 aa13.27□□□□□ -0.29
SYCP3-201ENST00000266743 BCORQ6W2J9 1755 aa13.27□□□□□ -0.29
SYCP3-201ENST00000266743 HSPA5P11021 654 aaKnown RBP13.26□□□□□ -0.29
SYCP3-201ENST00000266743 GPTP24298 496 aa13.26□□□□□ -0.29
SYCP3-201ENST00000266743 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
SYCP3-201ENST00000266743 CC2D2BQ6DHV5 1058 aa13.26□□□□□ -0.29
SYCP3-201ENST00000266743 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
SYCP3-201ENST00000266743 HOXA10P31260 410 aaPredicted RBP13.25□□□□□ -0.29
SYCP3-201ENST00000266743 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
SYCP3-201ENST00000266743 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 GAS2L2Q8NHY3 880 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 PHACTR3Q96KR7 559 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 BCL2L13Q9BXK5 485 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 ZNRF3Q9ULT6 936 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 HPS5Q9UPZ3 1129 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 TRPM7Q96QT4 1865 aa13.25□□□□□ -0.29
SYCP3-201ENST00000266743 RGMBQ6NW40 437 aa13.24□□□□□ -0.29
SYCP3-201ENST00000266743 CEMIPQ8WUJ3 1361 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 UBN2Q6ZU65 1347 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 ADM5C9JUS6 153 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 EGFRP00533 1210 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
SYCP3-201ENST00000266743 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 MCM10Q7L590 875 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
SYCP3-201ENST00000266743 CTU1Q7Z7A3 348 aaKnown RBP13.23□□□□□ -0.29
SYCP3-201ENST00000266743 RBM17Q96I25 401 aaKnown RBP13.23□□□□□ -0.29
SYCP3-201ENST00000266743 CNOT7Q9UIV1 285 aaKnown RBP13.23□□□□□ -0.29
SYCP3-201ENST00000266743 PSEN1P49768 467 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
SYCP3-201ENST00000266743 PDAP1Q13442 181 aaKnown RBP13.22□□□□□ -0.29
SYCP3-201ENST00000266743 DCTN1Q14203 1278 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 CRAMP1Q96RY5 1269 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 CSRNP1Q96S65 589 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 GBA2Q9HCG7 927 aaPredicted RBP13.22□□□□□ -0.29
SYCP3-201ENST00000266743 SAGE1Q9NXZ1 904 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 MIS18AQ9NYP9 233 aa13.22□□□□□ -0.29
SYCP3-201ENST00000266743 YDJCA8MPS7 323 aa13.21□□□□□ -0.29
SYCP3-201ENST00000266743 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.29
SYCP3-201ENST00000266743 RBM26Q5T8P6 1007 aaKnown RBP13.21□□□□□ -0.29
SYCP3-201ENST00000266743 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
SYCP3-201ENST00000266743 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
SYCP3-201ENST00000266743 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
SYCP3-201ENST00000266743 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
SYCP3-201ENST00000266743 C7P10643 843 aa13.2□□□□□ -0.3
SYCP3-201ENST00000266743 HABP4Q5JVS0 413 aaKnown RBP13.2□□□□□ -0.3
SYCP3-201ENST00000266743 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
SYCP3-201ENST00000266743 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
SYCP3-201ENST00000266743 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
SYCP3-201ENST00000266743 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
SYCP3-201ENST00000266743 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
SYCP3-201ENST00000266743 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
SYCP3-201ENST00000266743 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
SYCP3-201ENST00000266743 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
SYCP3-201ENST00000266743 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
SYCP3-201ENST00000266743 SIPA1L3O60292 1781 aaPredicted RBP13.19□□□□□ -0.3
SYCP3-201ENST00000266743 ABCC4O15439 1325 aa13.18□□□□□ -0.3
SYCP3-201ENST00000266743 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
SYCP3-201ENST00000266743 H7C1D1 291 aa13.18□□□□□ -0.3
SYCP3-201ENST00000266743 NTSR2O95665 410 aa13.18□□□□□ -0.3
SYCP3-201ENST00000266743 SLC10A3P09131 477 aa13.18□□□□□ -0.3
SYCP3-201ENST00000266743 EIF4G2P78344 907 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYCP3-201ENST00000266743 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
SYCP3-201ENST00000266743 DPP8Q6V1X1 898 aaPredicted RBP13.18□□□□□ -0.3
SYCP3-201ENST00000266743 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
SYCP3-201ENST00000266743 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
SYCP3-201ENST00000266743 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
SYCP3-201ENST00000266743 MAP3K15Q6ZN16 1313 aa13.17□□□□□ -0.3
SYCP3-201ENST00000266743 RGL2O15211 777 aa13.17□□□□□ -0.3
SYCP3-201ENST00000266743 TBC1D8O95759 1140 aa13.17□□□□□ -0.3
SYCP3-201ENST00000266743 MYL6BP14649 208 aa13.17□□□□□ -0.3
SYCP3-201ENST00000266743 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
SYCP3-201ENST00000266743 TNIP1Q15025 636 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms