RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TSGA10IPQ3SY00 556 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 GJD4Q96KN9 370 aaPredicted RBP14.9□□□□□ -0.02
BEST3-201ENST00000266661 SLC52A2Q9HAB3 445 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 NLRP2Q9NX02 1062 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 TRPC5Q9UL62 973 aaPredicted RBP14.9□□□□□ -0.02
BEST3-201ENST00000266661 TPCN1Q9ULQ1 816 aa14.9□□□□□ -0.02
BEST3-201ENST00000266661 WDR17Q8IZU2 1322 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 RRP9O43818 475 aaKnown RBP14.89□□□□□ -0.03
BEST3-201ENST00000266661 RFX5P48382 616 aaPredicted RBP14.89□□□□□ -0.03
BEST3-201ENST00000266661 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.03
BEST3-201ENST00000266661 GCKRQ14397 625 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 VPS72Q15906 364 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 EPHA10Q5JZY3 1008 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 CCDC8Q9H0W5 538 aaPredicted RBP14.89□□□□□ -0.03
BEST3-201ENST00000266661 ATP6V1DQ9Y5K8 247 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 BRWD3Q6RI45 1802 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 A0A0D9SFI3 127 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
BEST3-201ENST00000266661 FAM98CQ17RN3 349 aaKnown RBP14.89□□□□□ -0.03
BEST3-201ENST00000266661 UBE2Q2Q8WVN8 375 aa14.89□□□□□ -0.03
BEST3-201ENST00000266661 METTL22Q9BUU2 404 aaPredicted RBP14.89□□□□□ -0.03
BEST3-201ENST00000266661 PLEKHG2Q9H7P9 1386 aa14.88□□□□□ -0.03
BEST3-201ENST00000266661 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
BEST3-201ENST00000266661 SPATA31A5Q5VU36 1347 aa14.88□□□□□ -0.03
BEST3-201ENST00000266661 SPATA31A7Q8IWB4 1347 aa14.88□□□□□ -0.03
BEST3-201ENST00000266661 USPL1Q5W0Q7 1092 aa14.88□□□□□ -0.03
BEST3-201ENST00000266661 COPRSQ9NQ92 184 aa14.88□□□□□ -0.03
BEST3-201ENST00000266661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.03
BEST3-201ENST00000266661 PHKG2P15735 406 aa14.87□□□□□ -0.03
BEST3-201ENST00000266661 ZKSCAN1P17029 563 aaPredicted RBP14.87□□□□□ -0.03
BEST3-201ENST00000266661 DNM1Q05193 864 aaKnown RBP14.87□□□□□ -0.03
BEST3-201ENST00000266661 SLC39A6Q13433 755 aa14.87□□□□□ -0.03
BEST3-201ENST00000266661 TAF6LQ9Y6J9 622 aa14.87□□□□□ -0.03
BEST3-201ENST00000266661 PDIA4P13667 645 aaKnown RBP14.86□□□□□ -0.03
BEST3-201ENST00000266661 RXRBP28702 533 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 AIMP1Q12904 312 aaKnown RBP14.86□□□□□ -0.03
BEST3-201ENST00000266661 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
BEST3-201ENST00000266661 ILDR2Q71H61 639 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 XAGE3Q8WTP9 111 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 PSMA5P28066 241 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 TOB2Q14106 344 aaPredicted RBP14.86□□□□□ -0.03
BEST3-201ENST00000266661 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 NECAB1Q8N987 351 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 BOLA2Q9H3K6 86 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 MEGF6O75095 1541 aa14.86□□□□□ -0.03
BEST3-201ENST00000266661 KAT6BQ8WYB5 2073 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 A0A0G2JS52 829 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 TAF5LO75529 589 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 ATP5JP18859 108 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 RPS6KB1P23443 525 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 RBM6P78332 1123 aaKnown RBP14.85□□□□□ -0.03
BEST3-201ENST00000266661 CSPP1Q1MSJ5 1256 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 COPS6Q7L5N1 327 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 ZNF589Q86UQ0 364 aaPredicted RBP14.85□□□□□ -0.03
BEST3-201ENST00000266661 KLHDC4Q8TBB5 520 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 DDX54Q8TDD1 881 aaKnown RBP14.85□□□□□ -0.03
BEST3-201ENST00000266661 ZNF496Q96IT1 587 aaPredicted RBP14.85□□□□□ -0.03
BEST3-201ENST00000266661 RFX7Q2KHR2 1363 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 WNK3Q9BYP7 1800 aa14.85□□□□□ -0.03
BEST3-201ENST00000266661 FIBPO43427 364 aa14.84□□□□□ -0.03
BEST3-201ENST00000266661 DTNBO60941 627 aa14.84□□□□□ -0.03
BEST3-201ENST00000266661 CASP7P55210 303 aa14.84□□□□□ -0.03
BEST3-201ENST00000266661 PTPN12Q05209 780 aaKnown RBP14.84□□□□□ -0.03
BEST3-201ENST00000266661 FAM182BQ5T319 152 aa14.84□□□□□ -0.03
BEST3-201ENST00000266661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.84□□□□□ -0.03
BEST3-201ENST00000266661 NFATC2IPQ8NCF5 419 aa14.84□□□□□ -0.03
BEST3-201ENST00000266661 SIL1Q9H173 461 aa14.84□□□□□ -0.03
BEST3-201ENST00000266661 HMG20BQ9P0W2 317 aa14.84□□□□□ -0.03
BEST3-201ENST00000266661 DBNLQ9UJU6 430 aaKnown RBP14.84□□□□□ -0.03
BEST3-201ENST00000266661 ELP1O95163 1332 aa14.83□□□□□ -0.03
BEST3-201ENST00000266661 HCLS1P14317 486 aaPredicted RBP14.83□□□□□ -0.04
BEST3-201ENST00000266661 NEXNQ0ZGT2 675 aa14.83□□□□□ -0.04
BEST3-201ENST00000266661 ANKRD1Q15327 319 aa14.83□□□□□ -0.04
BEST3-201ENST00000266661 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
BEST3-201ENST00000266661 MYD88Q99836 296 aa14.83□□□□□ -0.04
BEST3-201ENST00000266661 FSD1Q9BTV5 496 aa14.83□□□□□ -0.04
BEST3-201ENST00000266661 CARD10Q9BWT7 1032 aa14.83□□□□□ -0.04
BEST3-201ENST00000266661 USP16Q9Y5T5 823 aa14.83□□□□□ -0.04
BEST3-201ENST00000266661 KDM4AO75164 1064 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 HSP90AA2PQ14568 343 aaPredicted RBP14.82□□□□□ -0.04
BEST3-201ENST00000266661 BLOC1S2Q6QNY1 142 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 RAPGEF4Q8WZA2 1011 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 USP25Q9UHP3 1055 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 AP5Z1O43299 807 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 MYL6BP14649 208 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 TNNI3KQ59H18 835 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 RNF20Q5VTR2 975 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 LARP1BQ659C4 914 aaKnown RBP14.82□□□□□ -0.04
BEST3-201ENST00000266661 CDC37L1Q7L3B6 337 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 SEPT12Q8IYM1 358 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 EDC3Q96F86 508 aaKnown RBP14.82□□□□□ -0.04
BEST3-201ENST00000266661 R3HCC1Q9Y3T6 440 aaKnown RBP14.82□□□□□ -0.04
BEST3-201ENST00000266661 FPGT-TNNI3KV9GXZ4 949 aa14.82□□□□□ -0.04
BEST3-201ENST00000266661 PKD1L3Q7Z443 1732 aa14.81□□□□□ -0.04
BEST3-201ENST00000266661 CYP27B1O15528 508 aa14.81□□□□□ -0.04
BEST3-201ENST00000266661 ADCY5O95622 1261 aa14.81□□□□□ -0.04
BEST3-201ENST00000266661 SNRPA1P09661 255 aaKnown RBP14.81□□□□□ -0.04
BEST3-201ENST00000266661 TATP17735 454 aaPredicted RBP14.81□□□□□ -0.04
BEST3-201ENST00000266661 GIMAP6Q6P9H5 292 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms