RNA–Protein interactions for RNA: ENST00000265807.7

SH2D4A-201, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH2D4A, Length 3,352 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-201ENST00000265807 USP21Q9UK80 565 aa13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 DDX60Q8IY21 1712 aaKnown RBP13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 CICQ96RK0 1608 aaPredicted RBP13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 NMIQ13287 307 aaPredicted RBP13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 PKP1Q13835 747 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 ZNF589Q86UQ0 364 aaPredicted RBP13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 ZNF34Q8IZ26 560 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 TTLL11Q8NHH1 800 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 CERKQ8TCT0 537 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 CASZ1Q86V15 1759 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 MYO5AQ9Y4I1 1855 aaKnown RBP13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 ADORA1P30542 326 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 RABEP1Q15276 862 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
SH2D4A-201ENST00000265807 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 HSPA4P34932 840 aa13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 LARP6Q9BRS8 491 aaKnown RBP13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 SBF2Q86WG5 1849 aa13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 EYA2O00167 538 aa13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 RAD50Q92878 1312 aa13.72□□□□□ -0.21
SH2D4A-201ENST00000265807 SPEF2Q9C093 1822 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 SNAP23O00161 211 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 ADCK5Q3MIX3 580 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 ZNF609O15014 1411 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 NEK4P51957 841 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.21
SH2D4A-201ENST00000265807 ATP5JP18859 108 aa13.71□□□□□ -0.22
SH2D4A-201ENST00000265807 SCARF1Q14162 830 aa13.71□□□□□ -0.22
SH2D4A-201ENST00000265807 DDX46Q7L014 1031 aaKnown RBP13.71□□□□□ -0.22
SH2D4A-201ENST00000265807 NEUROD6Q96NK8 337 aa13.71□□□□□ -0.22
SH2D4A-201ENST00000265807 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 A0A1B0GUL7 405 aa13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 PI16Q6UXB8 463 aa13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 DNAJC2Q99543 621 aaKnown RBP13.7□□□□□ -0.22
SH2D4A-201ENST00000265807 ITGA6P23229 1130 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 IL17RAQ96F46 866 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 AKAP11Q9UKA4 1901 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 WTIPA6NIX2 430 aaPredicted RBP13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 C3orf67Q6ZVT6 689 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 ERVV-1B6SEH8 477 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 CTSWP56202 376 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 RIPOR2Q9Y4F9 1068 aa13.69□□□□□ -0.22
SH2D4A-201ENST00000265807 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 FSD1Q9BTV5 496 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 CDHR2Q9BYE9 1310 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 IL15P40933 162 aaPredicted RBP13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 AFF2P51816 1311 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 HAUS7Q99871 368 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 CCDC57Q2TAC2 916 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 GPATCH3Q96I76 525 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
SH2D4A-201ENST00000265807 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 SLC51AQ86UW1 340 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 VGLL2Q8N8G2 317 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 NHSQ6T4R5 1651 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 CIAO1O76071 339 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 SSFA2P28290 1259 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 NECTIN1Q15223 517 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 HELBQ8NG08 1087 aaPredicted RBP13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 SNRKQ9NRH2 765 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 ZNF831Q5JPB2 1677 aa13.67□□□□□ -0.22
SH2D4A-201ENST00000265807 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 GOLIM4O00461 696 aa13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 SRP68Q9UHB9 627 aaKnown RBP13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 ZDHHC9Q9Y397 364 aa13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 NTSR2O95665 410 aa13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 IFIT5Q13325 482 aaKnown RBP13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 TTC14Q96N46 770 aa13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 BRWD3Q6RI45 1802 aa13.66□□□□□ -0.22
SH2D4A-201ENST00000265807 LARGE1O95461 756 aa13.65□□□□□ -0.22
SH2D4A-201ENST00000265807 VPS53Q5VIR6 699 aa13.65□□□□□ -0.22
SH2D4A-201ENST00000265807 XAGE2Q96GT9 111 aa13.65□□□□□ -0.22
SH2D4A-201ENST00000265807 MAP4K1Q92918 833 aa13.65□□□□□ -0.22
SH2D4A-201ENST00000265807 RBM8AQ9Y5S9 174 aaKnown RBP13.65□□□□□ -0.22
SH2D4A-201ENST00000265807 LY75O60449 1722 aa13.65□□□□□ -0.22
SH2D4A-201ENST00000265807 LRP5O75197 1615 aa13.65□□□□□ -0.22
SH2D4A-201ENST00000265807 RAB3GAP1Q15042 981 aa13.65□□□□□ -0.23
SH2D4A-201ENST00000265807 CCDC24Q8N4L8 307 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms