RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CCDC57Q2TAC2 916 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 NUTM2AQ8IVF1 878 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 RSPH14Q9UHP6 348 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 MEX3CQ5U5Q3 659 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 DDX12PQ92771 950 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 FANCAO15360 1455 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 U2AF2P26368 475 aaKnown RBP eCLIP13.39□□□□□ -0.277e-6■□□□□ 9.6
DNMT3A-201ENST00000264709 SF3B2Q13435 895 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 FCHSD1Q86WN1 690 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 VPS37DQ86XT2 251 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 ZBTB7BO15156 539 aaPredicted RBP13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 IQCDQ96DY2 449 aa13.39□□□□□ -0.27
DNMT3A-201ENST00000264709 PPFIA1Q13136 1202 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 DNAJC25Q9H1X3 360 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 IPO4Q8TEX9 1081 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 GCOM1H8Y6P7 765 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 MYZAPP0CAP1 466 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 KRT83P78385 493 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 GAS2L3Q86XJ1 694 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 ZSCAN26Q16670 478 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 VAMP4O75379 141 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 NSRP1Q9H0G5 558 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 AKAP2Q9Y2D5 859 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 HSF2BPO75031 334 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 ABCC1P33527 1531 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 FOSBP53539 338 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 KIAA1524Q8TCG1 905 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 EXOC4Q96A65 974 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 TAOK3Q9H2K8 898 aa13.38□□□□□ -0.27
DNMT3A-201ENST00000264709 SH3BGRP55822 239 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 EVCP57679 992 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 ATP8B2P98198 1209 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 PPP2R3AQ06190 1150 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 MLECQ14165 292 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 ELF2Q15723 593 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 RUFY3Q7L099 469 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 CDK5RAP3Q96JB5 506 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 NCOA3Q9Y6Q9 1424 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 TSGA10Q9BZW7 698 aa13.37□□□□□ -0.27
DNMT3A-201ENST00000264709 GBP2P32456 591 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 RHPN1Q8TCX5 695 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 ATP7AQ04656 1500 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 NUTM1Q86Y26 1132 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 GOLGA8BA8MQT2 603 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 ZFYP08048 801 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 MYL5Q02045 173 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 AFAP1L1Q8TED9 768 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 RAPGEF4Q8WZA2 1011 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 KRBA2Q6ZNG9 492 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 AK2P54819 239 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 GTF3C6Q969F1 213 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 TDO2P48775 406 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 VAV2P52735 878 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 ADGRF5Q8IZF2 1346 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 HSP90AB2PQ58FF8 381 aa13.36□□□□□ -0.27
DNMT3A-201ENST00000264709 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 SWAP70Q9UH65 585 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 MSH6P52701 1360 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 AOPEPQ8N6M6 819 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 GPT2Q8TD30 523 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 MAGI2Q86UL8 1455 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 PPP1R42Q7Z4L9 355 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 C10orf67Q8IYJ2 551 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 OTUD6BQ8N6M0 293 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 OSBPL3Q9H4L5 887 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 TTC14Q96N46 770 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 RNF41Q9H4P4 317 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 BMP2KQ9NSY1 1161 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 PTCH1Q13635 1447 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 SPTLC2O15270 562 aa13.35□□□□□ -0.27
DNMT3A-201ENST00000264709 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 GPATCH11Q8N954 259 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 TDRD7Q8NHU6 1098 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 PHLPP2Q6ZVD8 1323 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 CCDC121Q6ZUS5 278 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms