RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 CNKSR1Q969H4 720 aa9.93□□□□□ -0.82
GTF3C3-201ENST00000263956 GGA1Q9UJY5 639 aa9.93□□□□□ -0.82
GTF3C3-201ENST00000263956 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 MMP10P09238 476 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 TDO2P48775 406 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 SART3Q15020 963 aaKnown RBP9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 NBPF10Q6P3W6 841 aaKnown RBP9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 MON2Q7Z3U7 1717 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 UFL1O94874 794 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 KLHDC4Q8TBB5 520 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 PNMA6EA0A0J9YXQ4 647 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 PUM3Q15397 648 aaKnown RBP9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 HLFQ16534 295 aa9.92□□□□□ -0.82
GTF3C3-201ENST00000263956 PDE1AP54750 535 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 DPP8Q6V1X1 898 aaPredicted RBP9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 SUPT20HQ8NEM7 779 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 IQSEC3Q9UPP2 1182 aaPredicted RBP9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 MROH5Q6ZUA9 1318 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 USP5P45974 858 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 EIF5P55010 431 aaKnown RBP9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 ITPK1Q13572 414 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 ATF5Q9Y2D1 282 aaPredicted RBP9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 GSTO1P78417 241 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 RRP12Q5JTH9 1297 aaKnown RBP9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 SSH3Q8TE77 659 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 CTDP1Q9Y5B0 961 aaPredicted RBP9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 TTC41PQ6P2S7 1318 aa9.91□□□□□ -0.82
GTF3C3-201ENST00000263956 CPLX1O14810 134 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 BAG3O95817 575 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 SUSD4Q5VX71 490 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 LINC00116Q8NCU8 138 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 FBXO3Q9UK99 471 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 PIK3C2AO00443 1686 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 NFAT5O94916 1531 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 CNTNAP4Q9C0A0 1308 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 A0A1B0GUL7 405 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 ZFYP08048 801 aaPredicted RBP9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 TIMM10P62072 90 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 BMP2KLQ5H9B9 411 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 TTC22Q5TAA0 569 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 MPNDQ8N594 471 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 LPIN2Q92539 896 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 HDAC9Q9UKV0 1011 aa9.9□□□□□ -0.82
GTF3C3-201ENST00000263956 HIBADHP31937 336 aaKnown RBP9.9□□□□□ -0.83
GTF3C3-201ENST00000263956 TSHZ3Q63HK5 1081 aa9.9□□□□□ -0.83
GTF3C3-201ENST00000263956 SETD1AO15047 1707 aaKnown RBP9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 GOLGA6L4A6NEF3 574 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 H7C1W4 665 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 TNNI3KQ59H18 835 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 OGFOD1Q8N543 542 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 FAM184AQ8NB25 1140 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 FPGT-TNNI3KV9GXZ4 949 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 KDM6AO15550 1401 aaPredicted RBP9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 DHX16O60231 1041 aaKnown RBP9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 TMC4Q7Z404 712 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 TRIM28Q13263 835 aaKnown RBP9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 GREM2Q9H772 168 aa9.89□□□□□ -0.83
GTF3C3-201ENST00000263956 TAF5LO75529 589 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 POLR3DP05423 398 aaPredicted RBP9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 EZH2Q15910 746 aaKnown RBP9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 IMMTQ16891 758 aaKnown RBP9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 C16orf71Q8IYS4 520 aaPredicted RBP9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 ISCA1Q9BUE6 129 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 NAPBQ9H115 298 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 ZNF287Q9HBT7 754 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 DENND2AQ9ULE3 1009 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 AKAP12Q02952 1782 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 BBOX1O75936 387 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 IGKV5-2P06315 115 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 DEFB132Q7Z7B7 95 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 COPRSQ9NQ92 184 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 KRT32Q14532 448 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 TBC1D9BQ66K14 1250 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 BCL9O00512 1426 aa9.88□□□□□ -0.83
GTF3C3-201ENST00000263956 CYP7A1P22680 504 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 ATP2B4P23634 1241 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 ZRSR1Q15695 479 aaKnown RBP9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 NAA16Q6N069 864 aaPredicted RBP9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 LARGE2Q8N3Y3 721 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 PAG1Q9NWQ8 432 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 U3KPZ7 1027 aaPredicted RBP9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 CARMIL3Q8ND23 1372 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 MYO1BO43795 1136 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 SOGA3Q5TF21 947 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 XAGE2Q96GT9 111 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 DBNDD2Q9BQY9 259 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 SLKQ9H2G2 1235 aaPredicted RBP9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 NOP58Q9Y2X3 529 aaKnown RBP9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 ZBTB7AO95365 584 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 NFIXQ14938 502 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 SLC15A2Q16348 729 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 SKAP1Q86WV1 359 aa9.87□□□□□ -0.83
GTF3C3-201ENST00000263956 STK11IPQ8N1F8 1099 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms