RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PCCAP05165 728 aaPredicted RBP20.65■□□□□ 0.9
USE1-201ENST00000263897 G2E3Q7L622 706 aa20.65■□□□□ 0.9
USE1-201ENST00000263897 TMC4Q7Z404 712 aa20.65■□□□□ 0.9
USE1-201ENST00000263897 PI4KAP1Q8N8J0 262 aa20.65■□□□□ 0.9
USE1-201ENST00000263897 RTFDC1Q9BY42 306 aaPredicted RBP20.65■□□□□ 0.9
USE1-201ENST00000263897 CWC25Q9NXE8 425 aaPredicted RBP20.65■□□□□ 0.9
USE1-201ENST00000263897 IQCA1LA6NCM1 817 aa20.64■□□□□ 0.89
USE1-201ENST00000263897 HSP90B1P14625 803 aaKnown RBP20.64■□□□□ 0.89
USE1-201ENST00000263897 EXOSC9Q06265 439 aaKnown RBP20.64■□□□□ 0.89
USE1-201ENST00000263897 MPNDQ8N594 471 aa20.64■□□□□ 0.89
USE1-201ENST00000263897 SUPT20HQ8NEM7 779 aa20.64■□□□□ 0.89
USE1-201ENST00000263897 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
USE1-201ENST00000263897 EIF6P56537 245 aaKnown RBP20.63■□□□□ 0.89
USE1-201ENST00000263897 DPP8Q6V1X1 898 aaPredicted RBP20.63■□□□□ 0.89
USE1-201ENST00000263897 GPC2Q8N158 579 aa20.63■□□□□ 0.89
USE1-201ENST00000263897 CEP350Q5VT06 3117 aa20.63■□□□□ 0.89
USE1-201ENST00000263897 COL4A5P29400 1685 aa20.62■□□□□ 0.89
USE1-201ENST00000263897 PPIP5K2O43314 1243 aa20.62■□□□□ 0.89
USE1-201ENST00000263897 DNAJC5GQ8N7S2 189 aa20.62■□□□□ 0.89
USE1-201ENST00000263897 JARID2Q92833 1246 aaPredicted RBP20.62■□□□□ 0.89
USE1-201ENST00000263897 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
USE1-201ENST00000263897 TAF1DQ9H5J8 278 aaPredicted RBP20.62■□□□□ 0.89
USE1-201ENST00000263897 SCN4AP35499 1836 aa20.62■□□□□ 0.89
USE1-201ENST00000263897 CACNA1FO60840 1977 aa20.61■□□□□ 0.89
USE1-201ENST00000263897 IGKV5-2P06315 115 aa20.61■□□□□ 0.89
USE1-201ENST00000263897 NEXNQ0ZGT2 675 aa20.61■□□□□ 0.89
USE1-201ENST00000263897 AOC3Q16853 763 aa20.61■□□□□ 0.89
USE1-201ENST00000263897 MYH16Q9H6N6 1097 aa20.61■□□□□ 0.89
USE1-201ENST00000263897 HACL1Q9UJ83 578 aa20.61■□□□□ 0.89
USE1-201ENST00000263897 PDE8AO60658 829 aa20.6■□□□□ 0.89
USE1-201ENST00000263897 POTEIP0CG38 1075 aa20.6■□□□□ 0.89
USE1-201ENST00000263897 POTEJP0CG39 1038 aa20.6■□□□□ 0.89
USE1-201ENST00000263897 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
USE1-201ENST00000263897 CHADLQ6NUI6 762 aa20.6■□□□□ 0.89
USE1-201ENST00000263897 NIM1KQ8IY84 436 aa20.6■□□□□ 0.89
USE1-201ENST00000263897 FLIIQ13045 1269 aa20.59■□□□□ 0.89
USE1-201ENST00000263897 GJA3Q9Y6H8 435 aa20.59■□□□□ 0.89
USE1-201ENST00000263897 HTRA3P83110 453 aa20.58■□□□□ 0.89
USE1-201ENST00000263897 KIAA2012Q0VF49 1180 aa20.58■□□□□ 0.89
USE1-201ENST00000263897 SEC31BQ9NQW1 1179 aa20.58■□□□□ 0.89
USE1-201ENST00000263897 ZNRF3Q9ULT6 936 aa20.58■□□□□ 0.89
USE1-201ENST00000263897 CDHR2Q9BYE9 1310 aa20.57■□□□□ 0.88
USE1-201ENST00000263897 NEURL1BA8MQ27 555 aa20.57■□□□□ 0.88
USE1-201ENST00000263897 EPHX2P34913 555 aa20.57■□□□□ 0.88
USE1-201ENST00000263897 CWF19L2Q2TBE0 894 aaKnown RBP20.57■□□□□ 0.88
USE1-201ENST00000263897 CCDC152Q4G0S7 254 aa20.57■□□□□ 0.88
USE1-201ENST00000263897 NSFL1CQ9UNZ2 370 aaKnown RBP20.57■□□□□ 0.88
USE1-201ENST00000263897 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
USE1-201ENST00000263897 FKBP5Q13451 457 aaPredicted RBP20.56■□□□□ 0.88
USE1-201ENST00000263897 LDHDQ86WU2 507 aa20.56■□□□□ 0.88
USE1-201ENST00000263897 H7C1W4 665 aa20.55■□□□□ 0.88
USE1-201ENST00000263897 CXCL9Q07325 125 aa20.55■□□□□ 0.88
USE1-201ENST00000263897 EAPPQ56P03 285 aaPredicted RBP20.55■□□□□ 0.88
USE1-201ENST00000263897 PNMA8AQ86V59 439 aaPredicted RBP20.55■□□□□ 0.88
USE1-201ENST00000263897 DNAAF4Q8WXU2 420 aa20.55■□□□□ 0.88
USE1-201ENST00000263897 LRRC37AA6NMS7 1700 aa20.54■□□□□ 0.88
USE1-201ENST00000263897 GPSM2P81274 684 aa20.54■□□□□ 0.88
USE1-201ENST00000263897 COL4A1P02462 1669 aa20.54■□□□□ 0.88
USE1-201ENST00000263897 LMOD1P29536 600 aaPredicted RBP20.53■□□□□ 0.88
USE1-201ENST00000263897 GCKRQ14397 625 aa20.53■□□□□ 0.88
USE1-201ENST00000263897 WASHC4Q2M389 1173 aa20.53■□□□□ 0.88
USE1-201ENST00000263897 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
USE1-201ENST00000263897 TTLL11Q8NHH1 800 aa20.53■□□□□ 0.88
USE1-201ENST00000263897 CCDC85AQ96PX6 553 aaPredicted RBP20.53■□□□□ 0.88
USE1-201ENST00000263897 POLLQ9UGP5 575 aa20.53■□□□□ 0.88
USE1-201ENST00000263897 CLEC11AQ9Y240 323 aa20.53■□□□□ 0.88
USE1-201ENST00000263897 C6orf229H3BNL8 230 aa20.52■□□□□ 0.88
USE1-201ENST00000263897 EPS15P42566 896 aa20.52■□□□□ 0.88
USE1-201ENST00000263897 SCNN1DP51172 638 aa20.52■□□□□ 0.88
USE1-201ENST00000263897 CTSWP56202 376 aa20.52■□□□□ 0.88
USE1-201ENST00000263897 UBE3BQ7Z3V4 1068 aa20.52■□□□□ 0.88
USE1-201ENST00000263897 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
USE1-201ENST00000263897 TNIP1Q15025 636 aa20.51■□□□□ 0.87
USE1-201ENST00000263897 CIAPIN1Q6FI81 312 aa20.51■□□□□ 0.87
USE1-201ENST00000263897 KLRG1Q96E93 195 aa20.51■□□□□ 0.87
USE1-201ENST00000263897 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
USE1-201ENST00000263897 ITGBL1O95965 494 aaPredicted RBP20.5■□□□□ 0.87
USE1-201ENST00000263897 ANKRD18AQ8IVF6 992 aa20.5■□□□□ 0.87
USE1-201ENST00000263897 TBC1D16Q8TBP0 767 aa20.5■□□□□ 0.87
USE1-201ENST00000263897 EYA3Q99504 573 aa20.5■□□□□ 0.87
USE1-201ENST00000263897 YDJCA8MPS7 323 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 F6X3S4 739 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 CCER2I3L3R5 266 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 RIMBP2O15034 1052 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 RAD17O75943 681 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
USE1-201ENST00000263897 PLA2G12BQ9BX93 195 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 GPRC5DQ9NZD1 345 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 ANKIB1Q9P2G1 1089 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 PASKQ96RG2 1323 aa20.49■□□□□ 0.87
USE1-201ENST00000263897 LTBP1Q14766 1721 aa20.48■□□□□ 0.87
USE1-201ENST00000263897 CASP7P55210 303 aa20.48■□□□□ 0.87
USE1-201ENST00000263897 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
USE1-201ENST00000263897 MYH3P11055 1940 aa20.48■□□□□ 0.87
USE1-201ENST00000263897 ADAMTSL1Q8N6G6 1762 aa20.48■□□□□ 0.87
USE1-201ENST00000263897 E9PSI1 815 aa20.47■□□□□ 0.87
USE1-201ENST00000263897 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
USE1-201ENST00000263897 BEND3Q5T5X7 828 aa20.47■□□□□ 0.87
USE1-201ENST00000263897 MAP1SQ66K74 1059 aaPredicted RBP20.47■□□□□ 0.87
USE1-201ENST00000263897 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms