RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PDE8AO60658 829 aa23.12■■□□□ 1.29
SDF4-201ENST00000263741 EPHA10Q5JZY3 1008 aa23.12■■□□□ 1.29
SDF4-201ENST00000263741 SUCLG2Q96I99 432 aa23.12■■□□□ 1.29
SDF4-201ENST00000263741 ZNF219Q9P2Y4 722 aaPredicted RBP23.12■■□□□ 1.29
SDF4-201ENST00000263741 NPR1P16066 1061 aa23.12■■□□□ 1.29
SDF4-201ENST00000263741 CTSWP56202 376 aa23.12■■□□□ 1.29
SDF4-201ENST00000263741 ITPRIPQ8IWB1 547 aa23.12■■□□□ 1.29
SDF4-201ENST00000263741 STYK1Q6J9G0 422 aa23.1■■□□□ 1.29
SDF4-201ENST00000263741 PRPF40BQ6NWY9 871 aaKnown RBP23.1■■□□□ 1.29
SDF4-201ENST00000263741 KAZALD1Q96I82 304 aa23.1■■□□□ 1.29
SDF4-201ENST00000263741 UTYO14607 1347 aa23.1■■□□□ 1.29
SDF4-201ENST00000263741 DALRD3Q5D0E6 543 aaKnown RBP23.09■■□□□ 1.29
SDF4-201ENST00000263741 TTLL6Q8N841 843 aa23.09■■□□□ 1.29
SDF4-201ENST00000263741 SEC31BQ9NQW1 1179 aa23.09■■□□□ 1.29
SDF4-201ENST00000263741 PDZRN3Q9UPQ7 1066 aa23.09■■□□□ 1.29
SDF4-201ENST00000263741 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
SDF4-201ENST00000263741 FOXO4P98177 505 aa23.09■■□□□ 1.29
SDF4-201ENST00000263741 SF3B3Q15393 1217 aaKnown RBP23.09■■□□□ 1.29
SDF4-201ENST00000263741 GPR162Q16538 588 aa23.09■■□□□ 1.29
SDF4-201ENST00000263741 OLFM4Q6UX06 510 aa23.09■■□□□ 1.29
SDF4-201ENST00000263741 GREM2Q9H772 168 aa23.09■■□□□ 1.29
SDF4-201ENST00000263741 FAM161AQ3B820 660 aa23.08■■□□□ 1.29
SDF4-201ENST00000263741 TTLL11Q8NHH1 800 aa23.08■■□□□ 1.29
SDF4-201ENST00000263741 RBM17Q96I25 401 aaKnown RBP23.07■■□□□ 1.28
SDF4-201ENST00000263741 PLA2G12BQ9BX93 195 aa23.07■■□□□ 1.28
SDF4-201ENST00000263741 BICC1Q9H694 974 aaKnown RBP23.07■■□□□ 1.28
SDF4-201ENST00000263741 COG6Q9Y2V7 657 aa23.07■■□□□ 1.28
SDF4-201ENST00000263741 CHMP3Q9Y3E7 222 aa23.07■■□□□ 1.28
SDF4-201ENST00000263741 UBTFL1P0CB47 393 aaPredicted RBP23.07■■□□□ 1.28
SDF4-201ENST00000263741 HOXA10P31260 410 aaPredicted RBP23.07■■□□□ 1.28
SDF4-201ENST00000263741 DDX46Q7L014 1031 aaKnown RBP23.07■■□□□ 1.28
SDF4-201ENST00000263741 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.07■■□□□ 1.28
SDF4-201ENST00000263741 CNKSR1Q969H4 720 aa23.07■■□□□ 1.28
SDF4-201ENST00000263741 CCDC88AQ3V6T2 1871 aa23.06■■□□□ 1.28
SDF4-201ENST00000263741 HSP90B1P14625 803 aaKnown RBP23.06■■□□□ 1.28
SDF4-201ENST00000263741 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
SDF4-201ENST00000263741 CELF1Q92879 486 aaKnown RBP23.06■■□□□ 1.28
SDF4-201ENST00000263741 FER1L6Q2WGJ9 1857 aa23.06■■□□□ 1.28
SDF4-201ENST00000263741 LRRC37AA6NMS7 1700 aa23.06■■□□□ 1.28
SDF4-201ENST00000263741 LMBR1LQ6UX01 489 aa23.05■■□□□ 1.28
SDF4-201ENST00000263741 LRRFIP2Q9Y608 721 aaKnown RBP23.05■■□□□ 1.28
SDF4-201ENST00000263741 C21orf2O43822 256 aa23.05■■□□□ 1.28
SDF4-201ENST00000263741 CRAMP1Q96RY5 1269 aa23.04■■□□□ 1.28
SDF4-201ENST00000263741 A0A1B0GUL6 1792 aa23.04■■□□□ 1.28
SDF4-201ENST00000263741 ANKRD44Q8N8A2 993 aa23.04■■□□□ 1.28
SDF4-201ENST00000263741 C1orf115Q9H7X2 142 aa23.04■■□□□ 1.28
SDF4-201ENST00000263741 ALDH1B1P30837 517 aa23.03■■□□□ 1.28
SDF4-201ENST00000263741 PPEF1O14829 653 aaPredicted RBP23.02■■□□□ 1.28
SDF4-201ENST00000263741 CSF1RP07333 972 aa23.02■■□□□ 1.28
SDF4-201ENST00000263741 GRAPQ13588 217 aa23.02■■□□□ 1.28
SDF4-201ENST00000263741 MVPQ14764 893 aaKnown RBP23.02■■□□□ 1.28
SDF4-201ENST00000263741 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
SDF4-201ENST00000263741 SBF1O95248 1867 aa23.01■■□□□ 1.27
SDF4-201ENST00000263741 MS4A1P11836 297 aa23.01■■□□□ 1.27
SDF4-201ENST00000263741 ITGA6P23229 1130 aa23.01■■□□□ 1.27
SDF4-201ENST00000263741 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
SDF4-201ENST00000263741 GNAI3P08754 354 aa23■■□□□ 1.27
SDF4-201ENST00000263741 PDE3AQ14432 1141 aa23■■□□□ 1.27
SDF4-201ENST00000263741 ZBTB7BO15156 539 aaPredicted RBP22.99■■□□□ 1.27
SDF4-201ENST00000263741 RABL6Q3YEC7 729 aaPredicted RBP22.99■■□□□ 1.27
SDF4-201ENST00000263741 C7orf43Q8WVR3 580 aa22.99■■□□□ 1.27
SDF4-201ENST00000263741 ZNF594Q96JF6 807 aaPredicted RBP22.99■■□□□ 1.27
SDF4-201ENST00000263741 CHD4Q14839 1912 aa22.99■■□□□ 1.27
SDF4-201ENST00000263741 LTBP1Q14766 1721 aa22.98■■□□□ 1.27
SDF4-201ENST00000263741 RPS8P62241 208 aaKnown RBP22.97■■□□□ 1.27
SDF4-201ENST00000263741 RASSF7Q02833 373 aa22.97■■□□□ 1.27
SDF4-201ENST00000263741 ARHGAP27Q6ZUM4 889 aa22.97■■□□□ 1.27
SDF4-201ENST00000263741 SNED1Q8TER0 1413 aa22.97■■□□□ 1.27
SDF4-201ENST00000263741 ANKRD18AQ8IVF6 992 aa22.97■■□□□ 1.27
SDF4-201ENST00000263741 ANKRD18BA2A2Z9 1011 aa22.96■■□□□ 1.27
SDF4-201ENST00000263741 GNAI2P04899 355 aa22.96■■□□□ 1.27
SDF4-201ENST00000263741 IFIT5Q13325 482 aaKnown RBP22.96■■□□□ 1.27
SDF4-201ENST00000263741 KLHDC4Q8TBB5 520 aa22.96■■□□□ 1.27
SDF4-201ENST00000263741 CDC5LQ99459 802 aaKnown RBP22.96■■□□□ 1.27
SDF4-201ENST00000263741 DUOX1Q9NRD9 1551 aa22.96■■□□□ 1.27
SDF4-201ENST00000263741 DDX19BQ9UMR2 479 aa22.96■■□□□ 1.27
SDF4-201ENST00000263741 ATP6V0A2Q9Y487 856 aa22.96■■□□□ 1.27
SDF4-201ENST00000263741 BBOX1O75936 387 aa22.95■■□□□ 1.26
SDF4-201ENST00000263741 CCDC57Q2TAC2 916 aa22.95■■□□□ 1.26
SDF4-201ENST00000263741 DCAF8L1A6NGE4 600 aa22.94■■□□□ 1.26
SDF4-201ENST00000263741 NFKBIEO00221 500 aa22.94■■□□□ 1.26
SDF4-201ENST00000263741 CCDC93Q567U6 631 aa22.94■■□□□ 1.26
SDF4-201ENST00000263741 CRBNQ96SW2 442 aa22.94■■□□□ 1.26
SDF4-201ENST00000263741 IRX6P78412 446 aaPredicted RBP22.93■■□□□ 1.26
SDF4-201ENST00000263741 TAF7LQ5H9L4 462 aa22.93■■□□□ 1.26
SDF4-201ENST00000263741 TIAM2Q8IVF5 1701 aa22.93■■□□□ 1.26
SDF4-201ENST00000263741 GRIN3BO60391 1043 aa22.93■■□□□ 1.26
SDF4-201ENST00000263741 IGHMBP2P38935 993 aaKnown RBP22.93■■□□□ 1.26
SDF4-201ENST00000263741 DICER1Q9UPY3 1922 aaKnown RBP22.93■■□□□ 1.26
SDF4-201ENST00000263741 NEFLP07196 543 aa22.92■■□□□ 1.26
SDF4-201ENST00000263741 PRELPP51888 382 aa22.91■■□□□ 1.26
SDF4-201ENST00000263741 SP8Q8IXZ3 490 aa22.91■■□□□ 1.26
SDF4-201ENST00000263741 PUS3Q9BZE2 481 aaKnown RBP22.91■■□□□ 1.26
SDF4-201ENST00000263741 PNMA6EA0A0J9YXQ4 647 aa22.91■■□□□ 1.26
SDF4-201ENST00000263741 MPHOSPH8Q99549 860 aa22.91■■□□□ 1.26
SDF4-201ENST00000263741 ZBTB40Q9NUA8 1239 aa22.91■■□□□ 1.26
SDF4-201ENST00000263741 SRGAP3O43295 1099 aa22.9■■□□□ 1.26
SDF4-201ENST00000263741 RFX5P48382 616 aaPredicted RBP22.9■■□□□ 1.26
SDF4-201ENST00000263741 GPSM2P81274 684 aa22.9■■□□□ 1.26
SDF4-201ENST00000263741 PA2G4Q9UQ80 394 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms