RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ANKRD18BA2A2Z9 1011 aa15.72■□□□□ 0.11
CLNS1A-201ENST00000263309 CTSWP56202 376 aa15.72■□□□□ 0.11
CLNS1A-201ENST00000263309 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
CLNS1A-201ENST00000263309 CRY2Q49AN0 593 aa15.72■□□□□ 0.11
CLNS1A-201ENST00000263309 INTS3Q68E01 1043 aaKnown RBP15.72■□□□□ 0.11
CLNS1A-201ENST00000263309 ITPRIPQ8IWB1 547 aa15.72■□□□□ 0.11
CLNS1A-201ENST00000263309 NUP98P52948 1817 aa15.72■□□□□ 0.11
CLNS1A-201ENST00000263309 G3V3G9 751 aa15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 TRIM27P14373 513 aa15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 RPS8P62241 208 aaKnown RBP15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 GRAPQ13588 217 aa15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 CCDC93Q567U6 631 aa15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 DCAF8Q5TAQ9 597 aa15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 PRPF40BQ6NWY9 871 aaKnown RBP15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 PLA2G12BQ9BX93 195 aa15.71■□□□□ 0.11
CLNS1A-201ENST00000263309 PDE3AQ14432 1141 aa15.7■□□□□ 0.1
CLNS1A-201ENST00000263309 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
CLNS1A-201ENST00000263309 PXDNLA1KZ92 1463 aa15.7■□□□□ 0.1
CLNS1A-201ENST00000263309 C21orf2O43822 256 aa15.69■□□□□ 0.1
CLNS1A-201ENST00000263309 GNAI2P04899 355 aa15.69■□□□□ 0.1
CLNS1A-201ENST00000263309 KCNA3P22001 575 aa15.69■□□□□ 0.1
CLNS1A-201ENST00000263309 SP8Q8IXZ3 490 aa15.69■□□□□ 0.1
CLNS1A-201ENST00000263309 JARID2Q92833 1246 aaPredicted RBP15.69■□□□□ 0.1
CLNS1A-201ENST00000263309 WWC3Q9ULE0 1092 aa15.69■□□□□ 0.1
CLNS1A-201ENST00000263309 DDX19BQ9UMR2 479 aa15.69■□□□□ 0.1
CLNS1A-201ENST00000263309 TTLL11Q8NHH1 800 aa15.68■□□□□ 0.1
CLNS1A-201ENST00000263309 EYA3Q99504 573 aa15.68■□□□□ 0.1
CLNS1A-201ENST00000263309 ANKRD2Q9GZV1 360 aa15.68■□□□□ 0.1
CLNS1A-201ENST00000263309 ANKIB1Q9P2G1 1089 aa15.68■□□□□ 0.1
CLNS1A-201ENST00000263309 IFFO2Q5TF58 517 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 SYNE4Q8N205 404 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 MPNDQ8N594 471 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 VPS33BQ9H267 617 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 ARFGEF2Q9Y6D5 1785 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 UTYO14607 1347 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 ABCC4O15439 1325 aa15.67■□□□□ 0.1
CLNS1A-201ENST00000263309 ITGA6P23229 1130 aa15.66■□□□□ 0.1
CLNS1A-201ENST00000263309 KCNJ4P48050 445 aa15.66■□□□□ 0.1
CLNS1A-201ENST00000263309 JDP2Q8WYK2 163 aa15.66■□□□□ 0.1
CLNS1A-201ENST00000263309 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
CLNS1A-201ENST00000263309 USP44Q9H0E7 712 aa15.66■□□□□ 0.1
CLNS1A-201ENST00000263309 TAOK3Q9H2K8 898 aa15.66■□□□□ 0.1
CLNS1A-201ENST00000263309 CNNM1Q9NRU3 951 aa15.66■□□□□ 0.1
CLNS1A-201ENST00000263309 ABCC12Q96J65 1359 aa15.65■□□□□ 0.1
CLNS1A-201ENST00000263309 CSF1RP07333 972 aa15.65■□□□□ 0.1
CLNS1A-201ENST00000263309 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
CLNS1A-201ENST00000263309 LDHAL6AQ6ZMR3 332 aa15.65■□□□□ 0.1
CLNS1A-201ENST00000263309 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
CLNS1A-201ENST00000263309 NSFL1CQ9UNZ2 370 aaKnown RBP15.65■□□□□ 0.1
CLNS1A-201ENST00000263309 NRXN2Q9P2S2 1712 aa15.65■□□□□ 0.1
CLNS1A-201ENST00000263309 ANKRD36CQ5JPF3 1778 aa15.64■□□□□ 0.1
CLNS1A-201ENST00000263309 LMNB1P20700 586 aa15.64■□□□□ 0.09
CLNS1A-201ENST00000263309 DPY19L2Q6NUT2 758 aa15.64■□□□□ 0.09
CLNS1A-201ENST00000263309 BSDC1Q9NW68 430 aaPredicted RBP15.64■□□□□ 0.09
CLNS1A-201ENST00000263309 C6orf229H3BNL8 230 aa15.63■□□□□ 0.09
CLNS1A-201ENST00000263309 HMMRO75330 724 aa15.63■□□□□ 0.09
CLNS1A-201ENST00000263309 FKBP4Q02790 459 aaKnown RBP eCLIP15.63■□□□□ 0.09
CLNS1A-201ENST00000263309 ZC3H12CQ9C0D7 883 aaKnown RBP15.63■□□□□ 0.09
CLNS1A-201ENST00000263309 GREM2Q9H772 168 aa15.63■□□□□ 0.09
CLNS1A-201ENST00000263309 AFDNP55196 1824 aaKnown RBP15.63■□□□□ 0.09
CLNS1A-201ENST00000263309 RTL9Q8NET4 1388 aa15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 ATP2B4P23634 1241 aa15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 FOXO4P98177 505 aa15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 AAMPQ13685 434 aa15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 MVPQ14764 893 aaKnown RBP15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
CLNS1A-201ENST00000263309 CASP7P55210 303 aa15.61■□□□□ 0.09
CLNS1A-201ENST00000263309 PANK1Q8TE04 598 aa15.61■□□□□ 0.09
CLNS1A-201ENST00000263309 PSMD1Q99460 953 aa15.61■□□□□ 0.09
CLNS1A-201ENST00000263309 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
CLNS1A-201ENST00000263309 GGA1Q9UJY5 639 aa15.61■□□□□ 0.09
CLNS1A-201ENST00000263309 LRRFIP2Q9Y608 721 aaKnown RBP15.61■□□□□ 0.09
CLNS1A-201ENST00000263309 SRGAP3O43295 1099 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 PLIN1O60240 522 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 G3BP1Q13283 466 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 OS9Q13438 667 aaPredicted RBP15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 WASHC4Q2M389 1173 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 HSP90AB4PQ58FF6 505 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 C3orf67Q6ZVT6 689 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 CELF1Q92879 486 aaKnown RBP15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 LEMD3Q9Y2U8 911 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 COG6Q9Y2V7 657 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 XDHP47989 1333 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 MROH5Q6ZUA9 1318 aa15.6■□□□□ 0.09
CLNS1A-201ENST00000263309 KIF13BQ9NQT8 1826 aa15.59■□□□□ 0.09
CLNS1A-201ENST00000263309 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
CLNS1A-201ENST00000263309 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
CLNS1A-201ENST00000263309 RPAP2Q8IXW5 612 aaPredicted RBP15.59■□□□□ 0.09
CLNS1A-201ENST00000263309 NIM1KQ8IY84 436 aa15.59■□□□□ 0.09
CLNS1A-201ENST00000263309 LARGE2Q8N3Y3 721 aa15.59■□□□□ 0.09
CLNS1A-201ENST00000263309 MEIS3Q99687 375 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms