RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 RNF20Q5VTR2 975 aa21.25■□□□□ 0.99
TRAF4-201ENST00000262395 ZSCAN25Q6NSZ9 544 aa21.25■□□□□ 0.99
TRAF4-201ENST00000262395 CCDC144CPQ8IYA2 1237 aa21.25■□□□□ 0.99
TRAF4-201ENST00000262395 BRF1Q92994 677 aa21.25■□□□□ 0.99
TRAF4-201ENST00000262395 N4BP2Q86UW6 1770 aaPredicted RBP21.25■□□□□ 0.99
TRAF4-201ENST00000262395 DMTNQ08495 405 aa21.25■□□□□ 0.99
TRAF4-201ENST00000262395 SEC62Q99442 399 aaKnown RBP21.25■□□□□ 0.99
TRAF4-201ENST00000262395 GIGYF1O75420 1035 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-201ENST00000262395 MYL6BP14649 208 aa21.24■□□□□ 0.99
TRAF4-201ENST00000262395 CLSTN2Q9H4D0 955 aa21.24■□□□□ 0.99
TRAF4-201ENST00000262395 CLIP2Q9UDT6 1046 aa21.24■□□□□ 0.99
TRAF4-201ENST00000262395 TNNT1P13805 278 aa21.24■□□□□ 0.99
TRAF4-201ENST00000262395 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
TRAF4-201ENST00000262395 CACTINQ8WUQ7 758 aaKnown RBP21.24■□□□□ 0.99
TRAF4-201ENST00000262395 IP6K1Q92551 441 aa21.24■□□□□ 0.99
TRAF4-201ENST00000262395 ELP1O95163 1332 aa21.24■□□□□ 0.99
TRAF4-201ENST00000262395 ERCC4Q92889 916 aaPredicted RBP21.23■□□□□ 0.99
TRAF4-201ENST00000262395 NPHP3Q7Z494 1330 aa21.23■□□□□ 0.99
TRAF4-201ENST00000262395 NPHP4O75161 1426 aaPredicted RBP21.23■□□□□ 0.99
TRAF4-201ENST00000262395 H3BQV1 296 aa21.23■□□□□ 0.99
TRAF4-201ENST00000262395 ALDH1L1O75891 902 aa21.23■□□□□ 0.99
TRAF4-201ENST00000262395 HOXB7P09629 217 aa21.23■□□□□ 0.99
TRAF4-201ENST00000262395 IFFO2Q5TF58 517 aa21.23■□□□□ 0.99
TRAF4-201ENST00000262395 TPD52L1Q16890 204 aaPredicted RBP21.22■□□□□ 0.99
TRAF4-201ENST00000262395 LMOD2Q6P5Q4 547 aa21.22■□□□□ 0.99
TRAF4-201ENST00000262395 DDX19AQ9NUU7 478 aaKnown RBP21.22■□□□□ 0.99
TRAF4-201ENST00000262395 CRYBG1Q9Y4K1 1723 aa21.22■□□□□ 0.99
TRAF4-201ENST00000262395 RNMTO43148 476 aaKnown RBP21.22■□□□□ 0.99
TRAF4-201ENST00000262395 ANKRD1Q15327 319 aa21.22■□□□□ 0.99
TRAF4-201ENST00000262395 SLFNL1Q499Z3 407 aa21.22■□□□□ 0.99
TRAF4-201ENST00000262395 C1orf141Q5JVX7 400 aa21.22■□□□□ 0.99
TRAF4-201ENST00000262395 EPHA10Q5JZY3 1008 aa21.22■□□□□ 0.99
TRAF4-201ENST00000262395 Q6ZUG5 572 aa21.22■□□□□ 0.99
TRAF4-201ENST00000262395 DNAJC2Q99543 621 aaKnown RBP21.22■□□□□ 0.99
TRAF4-201ENST00000262395 HIP1O00291 1037 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 NCBP1Q09161 790 aaKnown RBP21.21■□□□□ 0.99
TRAF4-201ENST00000262395 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 PLA2G4DQ86XP0 818 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 NAP1L2Q9ULW6 460 aaPredicted RBP21.21■□□□□ 0.99
TRAF4-201ENST00000262395 TBX22Q9Y458 520 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 TAF5LO75529 589 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 FGD1P98174 961 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 SLC39A6Q13433 755 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 RIC3Q7Z5B4 369 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 ANKRD7Q92527 254 aa21.21■□□□□ 0.99
TRAF4-201ENST00000262395 C11orf57Q6ZUT1 292 aaPredicted RBP21.2■□□□□ 0.98
TRAF4-201ENST00000262395 LINS1Q8NG48 757 aa21.2■□□□□ 0.98
TRAF4-201ENST00000262395 CTIFO43310 598 aaKnown RBP21.19■□□□□ 0.98
TRAF4-201ENST00000262395 PLEKHO1Q53GL0 409 aaPredicted RBP21.19■□□□□ 0.98
TRAF4-201ENST00000262395 COL15A1P39059 1388 aa21.19■□□□□ 0.98
TRAF4-201ENST00000262395 USP27XA6NNY8 438 aa21.19■□□□□ 0.98
TRAF4-201ENST00000262395 IGKV5-2P06315 115 aa21.19■□□□□ 0.98
TRAF4-201ENST00000262395 GUCY1B3Q02153 619 aa21.19■□□□□ 0.98
TRAF4-201ENST00000262395 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.19■□□□□ 0.98
TRAF4-201ENST00000262395 V9GYY5 206 aaPredicted RBP21.19■□□□□ 0.98
TRAF4-201ENST00000262395 TDRD7Q8NHU6 1098 aaKnown RBP21.18■□□□□ 0.98
TRAF4-201ENST00000262395 NEK1Q96PY6 1258 aa21.18■□□□□ 0.98
TRAF4-201ENST00000262395 RESTQ13127 1097 aa21.18■□□□□ 0.98
TRAF4-201ENST00000262395 GTF3C6Q969F1 213 aa21.18■□□□□ 0.98
TRAF4-201ENST00000262395 PHF8Q9UPP1 1060 aa21.18■□□□□ 0.98
TRAF4-201ENST00000262395 MED23Q9ULK4 1368 aa21.17■□□□□ 0.98
TRAF4-201ENST00000262395 FILIP1Q7Z7B0 1213 aa21.17■□□□□ 0.98
TRAF4-201ENST00000262395 GOLGA6L19H0YKK7 550 aa21.17■□□□□ 0.98
TRAF4-201ENST00000262395 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
TRAF4-201ENST00000262395 TRMT1Q9NXH9 659 aaKnown RBP21.17■□□□□ 0.98
TRAF4-201ENST00000262395 USP16Q9Y5T5 823 aa21.17■□□□□ 0.98
TRAF4-201ENST00000262395 PXDNQ92626 1479 aa21.16■□□□□ 0.98
TRAF4-201ENST00000262395 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
TRAF4-201ENST00000262395 PSME1Q06323 249 aa21.16■□□□□ 0.98
TRAF4-201ENST00000262395 MYD88Q99836 296 aa21.16■□□□□ 0.98
TRAF4-201ENST00000262395 DBNLQ9UJU6 430 aaKnown RBP21.16■□□□□ 0.98
TRAF4-201ENST00000262395 TFCP2Q12800 502 aa21.16■□□□□ 0.98
TRAF4-201ENST00000262395 SCRN1Q12765 414 aa21.15■□□□□ 0.98
TRAF4-201ENST00000262395 CYP21A2P08686 494 aa21.15■□□□□ 0.98
TRAF4-201ENST00000262395 RBM43Q6ZSC3 357 aaKnown RBP21.15■□□□□ 0.98
TRAF4-201ENST00000262395 CCAR1Q8IX12 1150 aaKnown RBP21.15■□□□□ 0.98
TRAF4-201ENST00000262395 CCDC112Q8NEF3 446 aa21.15■□□□□ 0.98
TRAF4-201ENST00000262395 GOLPH3LQ9H4A5 285 aa21.15■□□□□ 0.98
TRAF4-201ENST00000262395 ESCO1Q5FWF5 840 aa21.15■□□□□ 0.98
TRAF4-201ENST00000262395 CHST3Q7LGC8 479 aa21.15■□□□□ 0.98
TRAF4-201ENST00000262395 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
TRAF4-201ENST00000262395 NCOA5Q9HCD5 579 aaKnown RBP21.15■□□□□ 0.98
TRAF4-201ENST00000262395 MARF1Q9Y4F3 1742 aaKnown RBP21.15■□□□□ 0.98
TRAF4-201ENST00000262395 RGPD2P0DJD1 1756 aa21.14■□□□□ 0.97
TRAF4-201ENST00000262395 A0A0G2JLW4 131 aa21.14■□□□□ 0.97
TRAF4-201ENST00000262395 SMTNL1A8MU46 457 aa21.14■□□□□ 0.97
TRAF4-201ENST00000262395 DDX58O95786 925 aaKnown RBP21.14■□□□□ 0.97
TRAF4-201ENST00000262395 APOBRQ0VD83 1088 aa21.13■□□□□ 0.97
TRAF4-201ENST00000262395 UTP14CQ5TAP6 766 aaKnown RBP21.13■□□□□ 0.97
TRAF4-201ENST00000262395 XAGE3Q8WTP9 111 aa21.13■□□□□ 0.97
TRAF4-201ENST00000262395 PDIA6Q15084 440 aa21.13■□□□□ 0.97
TRAF4-201ENST00000262395 DBNDD2Q9BQY9 259 aa21.13■□□□□ 0.97
TRAF4-201ENST00000262395 HMG20BQ9P0W2 317 aa21.13■□□□□ 0.97
TRAF4-201ENST00000262395 HDAC5Q9UQL6 1122 aa21.13■□□□□ 0.97
TRAF4-201ENST00000262395 IQCB1Q15051 598 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 CEP135Q66GS9 1140 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 STOX1Q6ZVD7 989 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 LRRC8AQ8IWT6 810 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 SYTL4Q96C24 671 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms