RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 CAVIN1Q6NZI2 390 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 IQCEQ6IPM2 695 aa15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 EIF4A2Q14240 407 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 WTAPQ15007 396 aa15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 BCS1LQ9Y276 419 aa15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 PABPN1LA6NDY0 278 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 RNMTO43148 476 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 NFKBIBQ15653 356 aa15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 CCDC174Q6PII3 467 aa15.69■□□□□ 0.1
PDGFRB-201ENST00000261799 KIF4AO95239 1232 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 IARSP41252 1262 aaKnown RBP15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 USP37Q86T82 979 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 TAF12Q16514 161 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 TMTC2Q8N394 836 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 NUP160Q12769 1436 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 GPHNQ9NQX3 736 aaPredicted RBP15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 DENND2AQ9ULE3 1009 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 GOLGA6L10A6NI86 522 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 H7C1D1 291 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 LPXNO60711 386 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 GSE1Q14687 1217 aa15.68■□□□□ 0.1
PDGFRB-201ENST00000261799 CCDC83Q8IWF9 413 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 GRM8O00222 908 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 ANXA1P04083 346 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 CACNA2D4Q7Z3S7 1137 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 KIAA1328Q86T90 577 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 FERMT1Q9BQL6 677 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 TTC6Q86TZ1 520 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 RARSP54136 660 aaKnown RBP15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 LRSAM1Q6UWE0 723 aa15.67■□□□□ 0.1
PDGFRB-201ENST00000261799 ARHGEF6Q15052 776 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 CCDC144CPQ8IYA2 1237 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 NUP62CLQ9H1M0 184 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 RNF214Q8ND24 703 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 HMG20BQ9P0W2 317 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 LRRC45Q96CN5 670 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 RRP36Q96EU6 259 aaKnown RBP15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 ARHGEF10LQ9HCE6 1279 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
PDGFRB-201ENST00000261799 SPDYE3A6NKU9 549 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 ZFYVE9O95405 1425 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 HEATR3Q7Z4Q2 680 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 EZRP15311 586 aaKnown RBP15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 HOMER2Q9NSB8 354 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 DISP3Q9P2K9 1392 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 NEO1Q92859 1461 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 RTL9Q8NET4 1388 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 PLEKHH1Q9ULM0 1364 aa15.65■□□□□ 0.1
PDGFRB-201ENST00000261799 HAND2P61296 217 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 SPA17Q15506 151 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 SLC26A6Q9BXS9 759 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 MCM5P33992 734 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 MTHFSDQ2M296 383 aaKnown RBP15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 PUF60Q9UHX1 559 aaKnown RBP15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 USP16Q9Y5T5 823 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 ATP7AQ04656 1500 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 MCM9Q9NXL9 1143 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 YEATS2Q9ULM3 1422 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 CALM1P0DP23 149 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 CALM2P0DP24 149 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 CALM3P0DP25 149 aa15.64■□□□□ 0.09
PDGFRB-201ENST00000261799 NASPP49321 788 aaPredicted RBP15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 SLC5A4Q9NY91 659 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 NAPAP54920 295 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 ORAI2Q96SN7 254 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 WDR70Q9NW82 654 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 ENOX2Q16206 610 aaKnown RBP15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 CCDC40Q4G0X9 1142 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 FAM114A1Q8IWE2 563 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 TNPO1Q92973 898 aaKnown RBP15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 MICU3Q86XE3 530 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 CCDC112Q8NEF3 446 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 TSHZ2Q9NRE2 1034 aa15.63■□□□□ 0.09
PDGFRB-201ENST00000261799 STX6O43752 255 aa15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 PHACTR2O75167 634 aa15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 CCT2P78371 535 aaKnown RBP15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 CERS3Q8IU89 383 aa15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 PUS7Q96PZ0 661 aaKnown RBP15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 COMMD10Q9Y6G5 202 aa15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 SLC9C2Q5TAH2 1124 aa15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 CCDC117Q8IWD4 279 aaPredicted RBP15.62■□□□□ 0.09
PDGFRB-201ENST00000261799 MSL1Q68DK7 614 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 PPIP5K2O43314 1243 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 CTNNA2P26232 953 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 ZNF354CQ86Y25 554 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 HIBADHP31937 336 aaKnown RBP15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 RAB3GAP1Q15042 981 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 MAGEB6Q8N7X4 407 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 DCPSQ96C86 337 aaKnown RBP15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 NEK1Q96PY6 1258 aa15.61■□□□□ 0.09
PDGFRB-201ENST00000261799 ASXL1Q8IXJ9 1541 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms