RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 DNAI1Q9UI46 699 aa8.45□□□□□ -1.06
CSDE1-201ENST00000261443 DLC1Q96QB1 1528 aa8.45□□□□□ -1.06
CSDE1-201ENST00000261443 ZKSCAN1P17029 563 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-201ENST00000261443 LMAN1P49257 510 aa8.45□□□□□ -1.06
CSDE1-201ENST00000261443 DHX40Q8IX18 779 aaKnown RBP8.45□□□□□ -1.06
CSDE1-201ENST00000261443 RUFY2Q8WXA3 655 aa8.45□□□□□ -1.06
CSDE1-201ENST00000261443 CTAGE5O15320 804 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 URI1O94763 535 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 TBC1D8O95759 1140 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 CCDC158Q5M9N0 1113 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 AOPEPQ8N6M6 819 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 CCDC150Q8NCX0 1101 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 OSBPL5Q9H0X9 879 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 ATG3Q9NT62 314 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 MIS18AQ9NYP9 233 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 MON2Q7Z3U7 1717 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 RAB11FIP3O75154 756 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 SURF6O75683 361 aaKnown RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 SASH3O75995 380 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 SFPQP23246 707 aaKnown RBP eCLIP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 ETF1P62495 437 aaKnown RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 CARD6Q9BX69 1037 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 SRRTQ9BXP5 876 aaKnown RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 ANO10Q9NW15 660 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 SLC52A1Q9NWF4 448 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 SOS1Q07889 1333 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 A0A087WWV3 80 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 EFCAB8A8MWE9 144 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 TADA3O75528 432 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 CC2D1AQ6P1N0 951 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-201ENST00000261443 NBPF11Q86T75 865 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 REXO1L1PQ8IX06 675 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 CEP57L1Q8IYX8 460 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 SLC26A8Q96RN1 970 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 STK31Q9BXU1 1019 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 ADAM21Q9UKJ8 722 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 CPS1P31327 1500 aa8.44□□□□□ -1.06
CSDE1-201ENST00000261443 AKAP12Q02952 1782 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 PHLPP2Q6ZVD8 1323 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 ADGRL3Q9HAR2 1447 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 LOC102724159A0A0B4J2E5 919 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 A0A1B0GUL7 405 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 EVCP57679 992 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
CSDE1-201ENST00000261443 PWP2Q15269 919 aaKnown RBP8.43□□□□□ -1.06
CSDE1-201ENST00000261443 TMC6Q7Z403 805 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 EXOC4Q96A65 974 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 C3P01024 1663 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 SMC2O95347 1197 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 CEBPZQ03701 1054 aaKnown RBP8.43□□□□□ -1.06
CSDE1-201ENST00000261443 SULT6B1Q6IMI4 303 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 ARMCX5Q6P1M9 558 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 LEKR1Q6ZMV7 388 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 RHPN1Q8TCX5 695 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 NAT10Q9H0A0 1025 aaKnown RBP8.43□□□□□ -1.06
CSDE1-201ENST00000261443 ARFGAP3Q9NP61 516 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 CFAP45Q9UL16 551 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 NRKQ7Z2Y5 1582 aa8.43□□□□□ -1.06
CSDE1-201ENST00000261443 SOX12O15370 315 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 CCP110O43303 1012 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 UBTFL1P0CB47 393 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 ACTN2P35609 894 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 KCNJ6P48051 423 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 STK3Q13188 491 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 GNL2Q13823 731 aaKnown RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 LRRFIP1Q32MZ4 808 aaKnown RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 NME9Q86XW9 330 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 CCAR1Q8IX12 1150 aaKnown RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 EPC1Q9H2F5 836 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 BRMS1Q9HCU9 246 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 PSD3Q9NYI0 1048 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 ZRANB1Q9UGI0 708 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 MLECQ14165 292 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 NECTIN1Q15223 517 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 ANKRD1Q15327 319 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 TTC31Q49AM3 519 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 CCDC73Q6ZRK6 1079 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 TCEANC2Q96MN5 208 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 TSPYL4Q9UJ04 414 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 JRKLQ9Y4A0 524 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 METP08581 1390 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 KINO60870 393 aaKnown RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 PSMA5P28066 241 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 FLIIQ13045 1269 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 CREB3L3Q68CJ9 461 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 WAPLQ7Z5K2 1190 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 SSH3Q8TE77 659 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 KCNB2Q92953 911 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 XPO4Q9C0E2 1151 aaKnown RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 TOMM22Q9NS69 142 aa8.42□□□□□ -1.06
CSDE1-201ENST00000261443 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
CSDE1-201ENST00000261443 PLEKHG2Q9H7P9 1386 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 H3BQV1 296 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 IVLP07476 585 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 GUCY2CP25092 1073 aa8.41□□□□□ -1.06
CSDE1-201ENST00000261443 DHX8Q14562 1220 aaKnown RBP8.41□□□□□ -1.06
CSDE1-201ENST00000261443 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms