RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 SPECC1Q5M775 1068 aa16.28■□□□□ 0.2
TMCC3-201ENST00000261226 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
TMCC3-201ENST00000261226 PRDM11Q9NQV5 511 aa16.28■□□□□ 0.2
TMCC3-201ENST00000261226 IFNKQ9P0W0 207 aa16.28■□□□□ 0.2
TMCC3-201ENST00000261226 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
TMCC3-201ENST00000261226 TSG101Q99816 390 aa16.28■□□□□ 0.2
TMCC3-201ENST00000261226 PA2G4Q9UQ80 394 aaKnown RBP16.28■□□□□ 0.2
TMCC3-201ENST00000261226 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
TMCC3-201ENST00000261226 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
TMCC3-201ENST00000261226 CAPN2P17655 700 aa16.27■□□□□ 0.2
TMCC3-201ENST00000261226 AFMP43652 599 aa16.27■□□□□ 0.2
TMCC3-201ENST00000261226 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
TMCC3-201ENST00000261226 CCDC194A0A1B0GVG4 234 aa16.27■□□□□ 0.2
TMCC3-201ENST00000261226 ALG1Q9BT22 464 aa16.27■□□□□ 0.2
TMCC3-201ENST00000261226 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.19
TMCC3-201ENST00000261226 TUBB4AP04350 444 aa16.27■□□□□ 0.19
TMCC3-201ENST00000261226 IVLP07476 585 aa16.27■□□□□ 0.19
TMCC3-201ENST00000261226 MAATS1Q7Z4T9 603 aa16.27■□□□□ 0.19
TMCC3-201ENST00000261226 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.19
TMCC3-201ENST00000261226 NAA15Q9BXJ9 866 aaKnown RBP16.26■□□□□ 0.19
TMCC3-201ENST00000261226 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
TMCC3-201ENST00000261226 SPTLC2O15270 562 aa16.26■□□□□ 0.19
TMCC3-201ENST00000261226 STARD3NLO95772 234 aa16.26■□□□□ 0.19
TMCC3-201ENST00000261226 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
TMCC3-201ENST00000261226 GOLGA1Q92805 767 aa16.26■□□□□ 0.19
TMCC3-201ENST00000261226 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
TMCC3-201ENST00000261226 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
TMCC3-201ENST00000261226 TERF1P54274 439 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 CATIPQ7Z7H3 387 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 FGFR1OPO95684 399 aaKnown RBP16.25■□□□□ 0.19
TMCC3-201ENST00000261226 MKNK2Q9HBH9 465 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 TMEM63CQ9P1W3 806 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
TMCC3-201ENST00000261226 COL17A1Q9UMD9 1497 aaPredicted RBP16.25■□□□□ 0.19
TMCC3-201ENST00000261226 ACEP12821 1306 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
TMCC3-201ENST00000261226 TMEM132AQ24JP5 1023 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 VPS36Q86VN1 386 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
TMCC3-201ENST00000261226 CCDC175P0C221 793 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 GTF2A1P52655 376 aaPredicted RBP16.25■□□□□ 0.19
TMCC3-201ENST00000261226 ZRANB1Q9UGI0 708 aa16.25■□□□□ 0.19
TMCC3-201ENST00000261226 PHACTR2O75167 634 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 SSR1P43307 286 aaKnown RBP16.24■□□□□ 0.19
TMCC3-201ENST00000261226 VPS18Q9P253 973 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 RRAGBQ5VZM2 374 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 TSC1Q92574 1164 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 TTC41PQ6P2S7 1318 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 TMCO5BA8MYB1 307 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 TRIM21P19474 475 aaKnown RBP16.24■□□□□ 0.19
TMCC3-201ENST00000261226 ZNF76P36508 570 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 FAM173BQ6P4H8 233 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 LZTFL1Q9NQ48 299 aa16.24■□□□□ 0.19
TMCC3-201ENST00000261226 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
TMCC3-201ENST00000261226 IDEP14735 1019 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 EIF4A2Q14240 407 aaKnown RBP16.23■□□□□ 0.19
TMCC3-201ENST00000261226 ANKRD18AQ8IVF6 992 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 CEP112Q8N8E3 955 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.23■□□□□ 0.19
TMCC3-201ENST00000261226 MSH6P52701 1360 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 PPP1R12BO60237 982 aaPredicted RBP16.23■□□□□ 0.19
TMCC3-201ENST00000261226 GBP2P32456 591 aaPredicted RBP16.23■□□□□ 0.19
TMCC3-201ENST00000261226 UBA7P41226 1012 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 TRIM47Q96LD4 638 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 GOLGA6L10A0A0M3HER8 536 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 CTAGE9A4FU28 777 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 APOBRQ0VD83 1088 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
TMCC3-201ENST00000261226 ZBTB43O43298 467 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 AKR1B10O60218 316 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 DTNBO60941 627 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 CTAGE1Q96RT6 745 aa16.23■□□□□ 0.19
TMCC3-201ENST00000261226 MYO1BO43795 1136 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 HSF2BPO75031 334 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
TMCC3-201ENST00000261226 LDHAL6AQ6ZMR3 332 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 DRC1Q96MC2 740 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 TRMT112Q9UI30 125 aaKnown RBP16.22■□□□□ 0.19
TMCC3-201ENST00000261226 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
TMCC3-201ENST00000261226 BLMP54132 1417 aaPredicted RBP16.22■□□□□ 0.19
TMCC3-201ENST00000261226 ANKRD18BA2A2Z9 1011 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 PTPDC1A2A3K4 754 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 GRM8O00222 908 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 SLC5A1P13866 664 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 GAS2L3Q86XJ1 694 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 ARHGEF12Q9NZN5 1544 aa16.22■□□□□ 0.19
TMCC3-201ENST00000261226 CAVIN4Q5BKX8 364 aa16.21■□□□□ 0.19
TMCC3-201ENST00000261226 ANKRD13DQ6ZTN6 518 aa16.21■□□□□ 0.19
TMCC3-201ENST00000261226 C10orf67Q8IYJ2 551 aa16.21■□□□□ 0.19
TMCC3-201ENST00000261226 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
TMCC3-201ENST00000261226 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
TMCC3-201ENST00000261226 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms