RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 RIC3Q7Z5B4 369 aa21.85■■□□□ 1.09
CGREF1-201ENST00000260595 TSPYL6Q8N831 410 aa21.85■■□□□ 1.09
CGREF1-201ENST00000260595 CLEC11AQ9Y240 323 aa21.85■■□□□ 1.09
CGREF1-201ENST00000260595 LTBP1Q14766 1721 aa21.84■■□□□ 1.09
CGREF1-201ENST00000260595 DDX60Q8IY21 1712 aaKnown RBP21.84■■□□□ 1.09
CGREF1-201ENST00000260595 EPS15P42566 896 aa21.84■■□□□ 1.09
CGREF1-201ENST00000260595 GOLGA2Q08379 1002 aa21.84■■□□□ 1.09
CGREF1-201ENST00000260595 CCDC27Q2M243 656 aa21.84■■□□□ 1.09
CGREF1-201ENST00000260595 TMC4Q7Z404 712 aa21.84■■□□□ 1.09
CGREF1-201ENST00000260595 CELF1Q92879 486 aaKnown RBP21.84■■□□□ 1.09
CGREF1-201ENST00000260595 IRS4O14654 1257 aaPredicted RBP21.83■■□□□ 1.09
CGREF1-201ENST00000260595 CXCL9Q07325 125 aa21.83■■□□□ 1.09
CGREF1-201ENST00000260595 KIAA2012Q0VF49 1180 aa21.83■■□□□ 1.09
CGREF1-201ENST00000260595 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.09
CGREF1-201ENST00000260595 MAP1SQ66K74 1059 aaPredicted RBP21.83■■□□□ 1.09
CGREF1-201ENST00000260595 ZNRF3Q9ULT6 936 aa21.83■■□□□ 1.09
CGREF1-201ENST00000260595 LMOD1P29536 600 aaPredicted RBP21.82■■□□□ 1.08
CGREF1-201ENST00000260595 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
CGREF1-201ENST00000260595 WWC1Q8IX03 1113 aa21.82■■□□□ 1.08
CGREF1-201ENST00000260595 CNTROBQ8N137 903 aa21.82■■□□□ 1.08
CGREF1-201ENST00000260595 ZBTB38Q8NAP3 1195 aaPredicted RBP21.82■■□□□ 1.08
CGREF1-201ENST00000260595 TSR2Q969E8 191 aaKnown RBP21.81■■□□□ 1.08
CGREF1-201ENST00000260595 MYD88Q99836 296 aa21.81■■□□□ 1.08
CGREF1-201ENST00000260595 MKRN1Q9UHC7 482 aaKnown RBP21.81■■□□□ 1.08
CGREF1-201ENST00000260595 COL4A1P02462 1669 aa21.81■■□□□ 1.08
CGREF1-201ENST00000260595 TAF1P21675 1872 aa21.81■■□□□ 1.08
CGREF1-201ENST00000260595 DUOX1Q9NRD9 1551 aa21.8■■□□□ 1.08
CGREF1-201ENST00000260595 TMEM88BA6NKF7 163 aa21.8■■□□□ 1.08
CGREF1-201ENST00000260595 CHMP4AQ9BY43 222 aa21.8■■□□□ 1.08
CGREF1-201ENST00000260595 CNTNAP1P78357 1384 aa21.79■■□□□ 1.08
CGREF1-201ENST00000260595 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
CGREF1-201ENST00000260595 CCDC191Q8NCU4 936 aa21.79■■□□□ 1.08
CGREF1-201ENST00000260595 METTL22Q9BUU2 404 aaPredicted RBP21.79■■□□□ 1.08
CGREF1-201ENST00000260595 GPRC5DQ9NZD1 345 aa21.79■■□□□ 1.08
CGREF1-201ENST00000260595 LRRC37AA6NMS7 1700 aa21.78■■□□□ 1.08
CGREF1-201ENST00000260595 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
CGREF1-201ENST00000260595 YDJCA8MPS7 323 aa21.78■■□□□ 1.08
CGREF1-201ENST00000260595 PCCAP05165 728 aaPredicted RBP21.78■■□□□ 1.08
CGREF1-201ENST00000260595 HSPA1AP0DMV8 641 aaKnown RBP21.78■■□□□ 1.08
CGREF1-201ENST00000260595 HSPA1BP0DMV9 641 aaKnown RBP21.78■■□□□ 1.08
CGREF1-201ENST00000260595 USP50Q70EL3 339 aaPredicted RBP21.78■■□□□ 1.08
CGREF1-201ENST00000260595 RPS8P62241 208 aaKnown RBP21.77■■□□□ 1.08
CGREF1-201ENST00000260595 COL13A1Q5TAT6 717 aaPredicted RBP21.77■■□□□ 1.08
CGREF1-201ENST00000260595 CIAPIN1Q6FI81 312 aa21.77■■□□□ 1.08
CGREF1-201ENST00000260595 MRS2Q9HD23 443 aa21.77■■□□□ 1.08
CGREF1-201ENST00000260595 NSFL1CQ9UNZ2 370 aaKnown RBP21.77■■□□□ 1.08
CGREF1-201ENST00000260595 RAD17O75943 681 aa21.76■■□□□ 1.07
CGREF1-201ENST00000260595 DDX58O95786 925 aaKnown RBP21.76■■□□□ 1.07
CGREF1-201ENST00000260595 GMPSP49915 693 aaPredicted RBP21.76■■□□□ 1.07
CGREF1-201ENST00000260595 GPSM2P81274 684 aa21.76■■□□□ 1.07
CGREF1-201ENST00000260595 SEC31BQ9NQW1 1179 aa21.76■■□□□ 1.07
CGREF1-201ENST00000260595 CWC25Q9NXE8 425 aaPredicted RBP21.76■■□□□ 1.07
CGREF1-201ENST00000260595 POLLQ9UGP5 575 aa21.76■■□□□ 1.07
CGREF1-201ENST00000260595 MAP3K2Q9Y2U5 619 aa21.76■■□□□ 1.07
CGREF1-201ENST00000260595 PCNTO95613 3336 aa21.76■■□□□ 1.07
CGREF1-201ENST00000260595 IL16Q14005 1332 aa21.76■■□□□ 1.07
CGREF1-201ENST00000260595 KSR2Q6VAB6 950 aa21.75■■□□□ 1.07
CGREF1-201ENST00000260595 JARID2Q92833 1246 aaPredicted RBP21.75■■□□□ 1.07
CGREF1-201ENST00000260595 ADARB2Q9NS39 739 aaKnown RBP21.75■■□□□ 1.07
CGREF1-201ENST00000260595 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
CGREF1-201ENST00000260595 ANP32CO43423 234 aa21.74■■□□□ 1.07
CGREF1-201ENST00000260595 PDE8AO60658 829 aa21.74■■□□□ 1.07
CGREF1-201ENST00000260595 IGKV5-2P06315 115 aa21.74■■□□□ 1.07
CGREF1-201ENST00000260595 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
CGREF1-201ENST00000260595 FMR1Q06787 632 aaKnown RBP eCLIP21.74■■□□□ 1.07
CGREF1-201ENST00000260595 TNIP1Q15025 636 aa21.74■■□□□ 1.07
CGREF1-201ENST00000260595 WASHC4Q2M389 1173 aa21.74■■□□□ 1.07
CGREF1-201ENST00000260595 TWISTNBQ3B726 338 aaPredicted RBP21.74■■□□□ 1.07
CGREF1-201ENST00000260595 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
CGREF1-201ENST00000260595 VEGFBP49765 207 aa21.73■■□□□ 1.07
CGREF1-201ENST00000260595 CDHR2Q9BYE9 1310 aa21.73■■□□□ 1.07
CGREF1-201ENST00000260595 G2E3Q7L622 706 aa21.72■■□□□ 1.07
CGREF1-201ENST00000260595 TBC1D16Q8TBP0 767 aa21.72■■□□□ 1.07
CGREF1-201ENST00000260595 STK31Q9BXU1 1019 aa21.72■■□□□ 1.07
CGREF1-201ENST00000260595 RASSF10A6NK89 507 aa21.71■■□□□ 1.07
CGREF1-201ENST00000260595 C6orf229H3BNL8 230 aa21.71■■□□□ 1.07
CGREF1-201ENST00000260595 RIMBP2O15034 1052 aa21.71■■□□□ 1.07
CGREF1-201ENST00000260595 CCDC152Q4G0S7 254 aa21.71■■□□□ 1.07
CGREF1-201ENST00000260595 DBNDD1Q9H9R9 158 aa21.71■■□□□ 1.07
CGREF1-201ENST00000260595 PODXL2Q9NZ53 605 aa21.71■■□□□ 1.07
CGREF1-201ENST00000260595 PGAP2Q9UHJ9 254 aa21.71■■□□□ 1.07
CGREF1-201ENST00000260595 SLC4A2P04920 1241 aa21.7■■□□□ 1.06
CGREF1-201ENST00000260595 HIRAP54198 1017 aaPredicted RBP21.7■■□□□ 1.06
CGREF1-201ENST00000260595 BCL2L13Q9BXK5 485 aa21.7■■□□□ 1.06
CGREF1-201ENST00000260595 SHTN1A0MZ66 631 aa21.69■■□□□ 1.06
CGREF1-201ENST00000260595 TRAF5O00463 557 aa21.69■■□□□ 1.06
CGREF1-201ENST00000260595 DEFB115Q30KQ5 88 aa21.69■■□□□ 1.06
CGREF1-201ENST00000260595 CST9Q5W186 159 aa21.69■■□□□ 1.06
CGREF1-201ENST00000260595 WDR63Q8IWG1 891 aa21.69■■□□□ 1.06
CGREF1-201ENST00000260595 GPR101Q96P66 508 aaPredicted RBP21.69■■□□□ 1.06
CGREF1-201ENST00000260595 CCDC85AQ96PX6 553 aaPredicted RBP21.69■■□□□ 1.06
CGREF1-201ENST00000260595 EYA3Q99504 573 aa21.69■■□□□ 1.06
CGREF1-201ENST00000260595 CNOT7Q9UIV1 285 aaKnown RBP21.69■■□□□ 1.06
CGREF1-201ENST00000260595 ZBTB12Q9Y330 459 aaPredicted RBP21.69■■□□□ 1.06
CGREF1-201ENST00000260595 FANCIQ9NVI1 1328 aa21.69■■□□□ 1.06
CGREF1-201ENST00000260595 PSMD14O00487 310 aa21.68■■□□□ 1.06
CGREF1-201ENST00000260595 CWF19L2Q2TBE0 894 aaKnown RBP21.68■■□□□ 1.06
CGREF1-201ENST00000260595 TRPM4Q8TD43 1214 aa21.68■■□□□ 1.06
CGREF1-201ENST00000260595 DPF2Q92785 391 aa21.68■■□□□ 1.06
CGREF1-201ENST00000260595 KCNQ5Q9NR82 932 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms