RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 EDC4Q6P2E9 1401 aaKnown RBP12.58□□□□□ -0.4
URB2-201ENST00000258243 COL17A1Q9UMD9 1497 aaPredicted RBP12.58□□□□□ -0.4
URB2-201ENST00000258243 PIK3C2GO75747 1445 aa12.58□□□□□ -0.4
URB2-201ENST00000258243 NAA16Q6N069 864 aaPredicted RBP12.58□□□□□ -0.4
URB2-201ENST00000258243 IPO4Q8TEX9 1081 aaKnown RBP12.58□□□□□ -0.4
URB2-201ENST00000258243 CCDC194A0A1B0GVG4 234 aa12.58□□□□□ -0.4
URB2-201ENST00000258243 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
URB2-201ENST00000258243 PICALMQ13492 652 aa12.58□□□□□ -0.4
URB2-201ENST00000258243 MAPKBP1O60336 1514 aa12.58□□□□□ -0.4
URB2-201ENST00000258243 ERLIN2O94905 339 aa12.58□□□□□ -0.4
URB2-201ENST00000258243 TNNT1P13805 278 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 BBXQ8WY36 941 aaPredicted RBP12.57□□□□□ -0.4
URB2-201ENST00000258243 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 ZFYP08048 801 aaPredicted RBP12.57□□□□□ -0.4
URB2-201ENST00000258243 PARP10Q53GL7 1025 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 LUC7LQ9NQ29 371 aaKnown RBP12.57□□□□□ -0.4
URB2-201ENST00000258243 CCDC87Q9NVE4 849 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
URB2-201ENST00000258243 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 PPP1R12BO60237 982 aaPredicted RBP12.57□□□□□ -0.4
URB2-201ENST00000258243 TRAF1Q13077 416 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 TMEM67Q5HYA8 995 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 SERPINC1P01008 464 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 TSPY3P0CV98 308 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 TSPY8P0CW00 308 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 TBC1D32Q96NH3 1257 aa12.57□□□□□ -0.4
URB2-201ENST00000258243 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 TNNI2P48788 182 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 VAT1LQ9HCJ6 419 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 NPHP4O75161 1426 aaPredicted RBP12.56□□□□□ -0.4
URB2-201ENST00000258243 PLCG2P16885 1265 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 ENOX2Q16206 610 aaKnown RBP12.56□□□□□ -0.4
URB2-201ENST00000258243 ERLIN1O75477 346 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 CCDC82Q8N4S0 544 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
URB2-201ENST00000258243 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 H0YIN7 160 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
URB2-201ENST00000258243 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 RBM28Q9NW13 759 aaKnown RBP12.56□□□□□ -0.4
URB2-201ENST00000258243 SLC4A4Q9Y6R1 1079 aa12.56□□□□□ -0.4
URB2-201ENST00000258243 IGHDP01880 384 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 CCDC83Q8IWF9 413 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
URB2-201ENST00000258243 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
URB2-201ENST00000258243 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 GTF2A1P52655 376 aaPredicted RBP12.55□□□□□ -0.4
URB2-201ENST00000258243 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 TXLNBQ8N3L3 684 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 NCOA7Q8NI08 942 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 POLR3AO14802 1390 aaPredicted RBP12.55□□□□□ -0.4
URB2-201ENST00000258243 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 PPFIBP1Q86W92 1011 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 TRPC5Q9UL62 973 aaPredicted RBP12.55□□□□□ -0.4
URB2-201ENST00000258243 ARHGEF12Q9NZN5 1544 aa12.55□□□□□ -0.4
URB2-201ENST00000258243 LTKP29376 864 aa12.54□□□□□ -0.4
URB2-201ENST00000258243 ADGRL2O95490 1459 aa12.54□□□□□ -0.4
URB2-201ENST00000258243 SOS1Q07889 1333 aaPredicted RBP12.54□□□□□ -0.4
URB2-201ENST00000258243 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
URB2-201ENST00000258243 MYO5CQ9NQX4 1742 aa12.54□□□□□ -0.4
URB2-201ENST00000258243 C8orf58Q8NAV2 365 aa12.54□□□□□ -0.4
URB2-201ENST00000258243 KRT23Q9C075 422 aa12.54□□□□□ -0.4
URB2-201ENST00000258243 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
URB2-201ENST00000258243 SEPT7Q16181 437 aaKnown RBP12.54□□□□□ -0.4
URB2-201ENST00000258243 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
URB2-201ENST00000258243 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 MICALCLQ6ZW33 695 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 QTRT2Q9H974 415 aaKnown RBP12.53□□□□□ -0.4
URB2-201ENST00000258243 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 HAND2P61296 217 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
URB2-201ENST00000258243 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 TSG101Q99816 390 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 ZHX1Q9UKY1 873 aaPredicted RBP12.53□□□□□ -0.4
URB2-201ENST00000258243 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 FLAD1Q8NFF5 587 aa12.53□□□□□ -0.4
URB2-201ENST00000258243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.4
URB2-201ENST00000258243 FILIP1Q7Z7B0 1213 aa12.52□□□□□ -0.4
URB2-201ENST00000258243 SWAP70Q9UH65 585 aa12.52□□□□□ -0.4
URB2-201ENST00000258243 TSPOAP1O95153 1857 aa12.52□□□□□ -0.4
URB2-201ENST00000258243 B4DLN1 442 aa12.52□□□□□ -0.41
URB2-201ENST00000258243 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.41
URB2-201ENST00000258243 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
URB2-201ENST00000258243 DHX8Q14562 1220 aaKnown RBP12.52□□□□□ -0.41
URB2-201ENST00000258243 VTI1AQ96AJ9 217 aa12.52□□□□□ -0.41
URB2-201ENST00000258243 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
URB2-201ENST00000258243 UFL1O94874 794 aa12.52□□□□□ -0.41
URB2-201ENST00000258243 RXRBP28702 533 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms