RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 CHL1O00533 1208 aa24.13■■□□□ 1.45
KHDC1-201ENST00000257765 LBX1P52954 281 aa24.13■■□□□ 1.45
KHDC1-201ENST00000257765 MAP2K1Q02750 393 aaPredicted RBP24.13■■□□□ 1.45
KHDC1-201ENST00000257765 GRAPQ13588 217 aa24.13■■□□□ 1.45
KHDC1-201ENST00000257765 GRAPLQ8TC17 118 aaPredicted RBP24.13■■□□□ 1.45
KHDC1-201ENST00000257765 DUOX1Q9NRD9 1551 aa24.12■■□□□ 1.45
KHDC1-201ENST00000257765 KIAA2012Q0VF49 1180 aa24.12■■□□□ 1.45
KHDC1-201ENST00000257765 PAXIP1Q6ZW49 1069 aaPredicted RBP24.12■■□□□ 1.45
KHDC1-201ENST00000257765 CHPF2Q9P2E5 772 aa24.12■■□□□ 1.45
KHDC1-201ENST00000257765 LAS1LQ9Y4W2 734 aaKnown RBP24.12■■□□□ 1.45
KHDC1-201ENST00000257765 CDHR2Q9BYE9 1310 aa24.11■■□□□ 1.45
KHDC1-201ENST00000257765 TRAF5O00463 557 aa24.11■■□□□ 1.45
KHDC1-201ENST00000257765 GMPSP49915 693 aaPredicted RBP24.11■■□□□ 1.45
KHDC1-201ENST00000257765 CIAPIN1Q6FI81 312 aa24.11■■□□□ 1.45
KHDC1-201ENST00000257765 HSPA8P11142 646 aaKnown RBP24.1■■□□□ 1.45
KHDC1-201ENST00000257765 ECE1P42892 770 aa24.1■■□□□ 1.45
KHDC1-201ENST00000257765 HDGFL1Q5TGJ6 251 aa24.1■■□□□ 1.45
KHDC1-201ENST00000257765 TMC4Q7Z404 712 aa24.1■■□□□ 1.45
KHDC1-201ENST00000257765 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
KHDC1-201ENST00000257765 CAPNS2Q96L46 248 aa24.1■■□□□ 1.45
KHDC1-201ENST00000257765 TRIM35Q9UPQ4 493 aa24.1■■□□□ 1.45
KHDC1-201ENST00000257765 HOXB7P09629 217 aa24.09■■□□□ 1.45
KHDC1-201ENST00000257765 WDR43Q15061 677 aaKnown RBP eCLIP24.09■■□□□ 1.45
KHDC1-201ENST00000257765 PLBD2Q8NHP8 589 aa24.09■■□□□ 1.45
KHDC1-201ENST00000257765 CST9Q5W186 159 aa24.08■■□□□ 1.45
KHDC1-201ENST00000257765 BCL2L13Q9BXK5 485 aa24.08■■□□□ 1.45
KHDC1-201ENST00000257765 TLL2Q9Y6L7 1015 aa24.08■■□□□ 1.45
KHDC1-201ENST00000257765 RAD17O75943 681 aa24.07■■□□□ 1.44
KHDC1-201ENST00000257765 TNIP1Q15025 636 aa24.07■■□□□ 1.44
KHDC1-201ENST00000257765 CYP4F22Q6NT55 531 aa24.07■■□□□ 1.44
KHDC1-201ENST00000257765 ZNF428Q96B54 188 aa24.07■■□□□ 1.44
KHDC1-201ENST00000257765 DDX10Q13206 875 aaKnown RBP24.06■■□□□ 1.44
KHDC1-201ENST00000257765 GRM1Q13255 1194 aa24.06■■□□□ 1.44
KHDC1-201ENST00000257765 DBF4Q9UBU7 674 aaPredicted RBP24.06■■□□□ 1.44
KHDC1-201ENST00000257765 ANKRD13DQ6ZTN6 518 aa24.05■■□□□ 1.44
KHDC1-201ENST00000257765 ISCA1Q9BUE6 129 aa24.05■■□□□ 1.44
KHDC1-201ENST00000257765 YDJCA8MPS7 323 aa24.04■■□□□ 1.44
KHDC1-201ENST00000257765 GPR101Q96P66 508 aaPredicted RBP24.04■■□□□ 1.44
KHDC1-201ENST00000257765 BEGAINQ9BUH8 593 aa24.04■■□□□ 1.44
KHDC1-201ENST00000257765 GLIS2Q9BZE0 524 aaPredicted RBP24.04■■□□□ 1.44
KHDC1-201ENST00000257765 ATP5J2-PTCD1G3V325 749 aa24.03■■□□□ 1.44
KHDC1-201ENST00000257765 CELF2O95319 508 aaKnown RBP24.03■■□□□ 1.44
KHDC1-201ENST00000257765 SF3B3Q15393 1217 aaKnown RBP24.03■■□□□ 1.44
KHDC1-201ENST00000257765 ZC3H15Q8WU90 426 aaKnown RBP24.03■■□□□ 1.44
KHDC1-201ENST00000257765 FAM89AQ96GI7 184 aa24.03■■□□□ 1.44
KHDC1-201ENST00000257765 PGAP2Q9UHJ9 254 aa24.03■■□□□ 1.44
KHDC1-201ENST00000257765 COL4A1P02462 1669 aa24.02■■□□□ 1.44
KHDC1-201ENST00000257765 TRPM4Q8TD43 1214 aa24.02■■□□□ 1.44
KHDC1-201ENST00000257765 CELF1Q92879 486 aaKnown RBP24.02■■□□□ 1.44
KHDC1-201ENST00000257765 CFAP44Q96MT7 982 aa24.02■■□□□ 1.44
KHDC1-201ENST00000257765 HYPKQ9NX55 129 aa24.02■■□□□ 1.44
KHDC1-201ENST00000257765 ADAMTS8Q9UP79 889 aa24.02■■□□□ 1.44
KHDC1-201ENST00000257765 HIRAP54198 1017 aaPredicted RBP24.01■■□□□ 1.43
KHDC1-201ENST00000257765 WASHC4Q2M389 1173 aa24.01■■□□□ 1.43
KHDC1-201ENST00000257765 DUSP27Q5VZP5 1158 aa24.01■■□□□ 1.43
KHDC1-201ENST00000257765 SAPCD2Q86UD0 394 aa24.01■■□□□ 1.43
KHDC1-201ENST00000257765 CNOT7Q9UIV1 285 aaKnown RBP24.01■■□□□ 1.43
KHDC1-201ENST00000257765 NSFL1CQ9UNZ2 370 aaKnown RBP24.01■■□□□ 1.43
KHDC1-201ENST00000257765 H7C1D1 291 aa24■■□□□ 1.43
KHDC1-201ENST00000257765 SHTN1A0MZ66 631 aa23.99■■□□□ 1.43
KHDC1-201ENST00000257765 MAP2K2P36507 400 aa23.99■■□□□ 1.43
KHDC1-201ENST00000257765 RTL5Q5HYW3 569 aaPredicted RBP23.99■■□□□ 1.43
KHDC1-201ENST00000257765 CDC37L1Q7L3B6 337 aa23.99■■□□□ 1.43
KHDC1-201ENST00000257765 MICALL2Q8IY33 904 aa23.99■■□□□ 1.43
KHDC1-201ENST00000257765 HHIPL1Q96JK4 782 aa23.99■■□□□ 1.43
KHDC1-201ENST00000257765 ZNF408Q9H9D4 720 aa23.99■■□□□ 1.43
KHDC1-201ENST00000257765 MBIPQ9NS73 344 aa23.99■■□□□ 1.43
KHDC1-201ENST00000257765 AOC2O75106 756 aa23.98■■□□□ 1.43
KHDC1-201ENST00000257765 TRIM28Q13263 835 aaKnown RBP23.98■■□□□ 1.43
KHDC1-201ENST00000257765 DBNDD1Q9H9R9 158 aa23.98■■□□□ 1.43
KHDC1-201ENST00000257765 C6orf229H3BNL8 230 aa23.97■■□□□ 1.43
KHDC1-201ENST00000257765 PSMD14O00487 310 aa23.97■■□□□ 1.43
KHDC1-201ENST00000257765 IRS4O14654 1257 aaPredicted RBP23.97■■□□□ 1.43
KHDC1-201ENST00000257765 GPSM2P81274 684 aa23.97■■□□□ 1.43
KHDC1-201ENST00000257765 DPF2Q92785 391 aa23.97■■□□□ 1.43
KHDC1-201ENST00000257765 ABHD8Q96I13 439 aa23.97■■□□□ 1.43
KHDC1-201ENST00000257765 ZBTB12Q9Y330 459 aaPredicted RBP23.97■■□□□ 1.43
KHDC1-201ENST00000257765 RIMBP2O15034 1052 aa23.96■■□□□ 1.43
KHDC1-201ENST00000257765 GOLGA2Q08379 1002 aa23.96■■□□□ 1.43
KHDC1-201ENST00000257765 RIC3Q7Z5B4 369 aa23.96■■□□□ 1.43
KHDC1-201ENST00000257765 EYA3Q99504 573 aa23.96■■□□□ 1.43
KHDC1-201ENST00000257765 POLLQ9UGP5 575 aa23.96■■□□□ 1.43
KHDC1-201ENST00000257765 POLR2AP24928 1970 aaKnown RBP23.94■■□□□ 1.42
KHDC1-201ENST00000257765 ECE2O60344 883 aa23.94■■□□□ 1.42
KHDC1-201ENST00000257765 ZNF853P0CG23 659 aa23.94■■□□□ 1.42
KHDC1-201ENST00000257765 SCN9AQ15858 1988 aa23.94■■□□□ 1.42
KHDC1-201ENST00000257765 HSP90B1P14625 803 aaKnown RBP23.93■■□□□ 1.42
KHDC1-201ENST00000257765 RPS12P25398 132 aaKnown RBP23.93■■□□□ 1.42
KHDC1-201ENST00000257765 RPS8P62241 208 aaKnown RBP23.93■■□□□ 1.42
KHDC1-201ENST00000257765 SAMD7Q7Z3H4 446 aa23.93■■□□□ 1.42
KHDC1-201ENST00000257765 ZBTB38Q8NAP3 1195 aaPredicted RBP23.93■■□□□ 1.42
KHDC1-201ENST00000257765 IFT57Q9NWB7 429 aa23.93■■□□□ 1.42
KHDC1-201ENST00000257765 TSKSQ9UJT2 592 aa23.93■■□□□ 1.42
KHDC1-201ENST00000257765 RTL9Q8NET4 1388 aa23.92■■□□□ 1.42
KHDC1-201ENST00000257765 CA12O43570 354 aa23.92■■□□□ 1.42
KHDC1-201ENST00000257765 BRPF1P55201 1214 aaPredicted RBP23.92■■□□□ 1.42
KHDC1-201ENST00000257765 DOK7Q18PE1 504 aa23.92■■□□□ 1.42
KHDC1-201ENST00000257765 TBC1D10BQ4KMP7 808 aaPredicted RBP23.92■■□□□ 1.42
KHDC1-201ENST00000257765 USP48Q86UV5 1035 aa23.92■■□□□ 1.42
KHDC1-201ENST00000257765 TBC1D16Q8TBP0 767 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms