RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 RTL5Q5HYW3 569 aaPredicted RBP10.9□□□□□ -0.66
TMEM258-201ENST00000257262 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
TMEM258-201ENST00000257262 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
TMEM258-201ENST00000257262 SH3TC1Q8TE82 1336 aa10.89□□□□□ -0.67
TMEM258-201ENST00000257262 C1QTNF8P60827 252 aa10.89□□□□□ -0.67
TMEM258-201ENST00000257262 PRPF40BQ6NWY9 871 aaKnown RBP10.89□□□□□ -0.67
TMEM258-201ENST00000257262 CCDC191Q8NCU4 936 aa10.89□□□□□ -0.67
TMEM258-201ENST00000257262 RPGRQ92834 1020 aaKnown RBP10.89□□□□□ -0.67
TMEM258-201ENST00000257262 UTRNP46939 3433 aa10.89□□□□□ -0.67
TMEM258-201ENST00000257262 SBF1O95248 1867 aa10.88□□□□□ -0.67
TMEM258-201ENST00000257262 IGKV5-2P06315 115 aa10.88□□□□□ -0.67
TMEM258-201ENST00000257262 HOXA10P31260 410 aaPredicted RBP10.88□□□□□ -0.67
TMEM258-201ENST00000257262 NEXNQ0ZGT2 675 aa10.88□□□□□ -0.67
TMEM258-201ENST00000257262 CWF19L2Q2TBE0 894 aaKnown RBP10.88□□□□□ -0.67
TMEM258-201ENST00000257262 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
TMEM258-201ENST00000257262 ZBTB38Q8NAP3 1195 aaPredicted RBP10.88□□□□□ -0.67
TMEM258-201ENST00000257262 JARID2Q92833 1246 aaPredicted RBP10.88□□□□□ -0.67
TMEM258-201ENST00000257262 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
TMEM258-201ENST00000257262 CWC25Q9NXE8 425 aaPredicted RBP10.88□□□□□ -0.67
TMEM258-201ENST00000257262 FER1L6Q2WGJ9 1857 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 CCDC88AQ3V6T2 1871 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 IRS4O14654 1257 aaPredicted RBP10.87□□□□□ -0.67
TMEM258-201ENST00000257262 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
TMEM258-201ENST00000257262 NUBP1P53384 320 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 RASSF7Q02833 373 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 C7orf43Q8WVR3 580 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 DNAAF4Q8WXU2 420 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 SSH1Q8WYL5 1049 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 RBM17Q96I25 401 aaKnown RBP10.87□□□□□ -0.67
TMEM258-201ENST00000257262 CRAMP1Q96RY5 1269 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 TAF1P21675 1872 aa10.87□□□□□ -0.67
TMEM258-201ENST00000257262 NEURL1BA8MQ27 555 aa10.86□□□□□ -0.67
TMEM258-201ENST00000257262 F6X3S4 739 aa10.86□□□□□ -0.67
TMEM258-201ENST00000257262 PCCAP05165 728 aaPredicted RBP10.86□□□□□ -0.67
TMEM258-201ENST00000257262 PRELPP51888 382 aa10.86□□□□□ -0.67
TMEM258-201ENST00000257262 OLFM4Q6UX06 510 aa10.86□□□□□ -0.67
TMEM258-201ENST00000257262 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
TMEM258-201ENST00000257262 BCL2L13Q9BXK5 485 aa10.86□□□□□ -0.67
TMEM258-201ENST00000257262 H7C1W4 665 aa10.85□□□□□ -0.67
TMEM258-201ENST00000257262 NFKBIEO00221 500 aa10.85□□□□□ -0.67
TMEM258-201ENST00000257262 SF3B3Q15393 1217 aaKnown RBP10.85□□□□□ -0.67
TMEM258-201ENST00000257262 ALDH1L2Q3SY69 923 aa10.85□□□□□ -0.67
TMEM258-201ENST00000257262 C9orf131Q5VYM1 1079 aa10.85□□□□□ -0.67
TMEM258-201ENST00000257262 LINS1Q8NG48 757 aa10.85□□□□□ -0.67
TMEM258-201ENST00000257262 ABCC4O15439 1325 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 PDE8AO60658 829 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 CT47B1P0C2W7 299 aaPredicted RBP10.84□□□□□ -0.67
TMEM258-201ENST00000257262 GCKRQ14397 625 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 CCDC93Q567U6 631 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 BEND3Q5T5X7 828 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 SOGA3Q5TF21 947 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 DDX46Q7L014 1031 aaKnown RBP10.84□□□□□ -0.67
TMEM258-201ENST00000257262 RNF181Q9P0P0 153 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 CDHR2Q9BYE9 1310 aa10.84□□□□□ -0.67
TMEM258-201ENST00000257262 PPEF1O14829 653 aaPredicted RBP10.83□□□□□ -0.68
TMEM258-201ENST00000257262 HSP90B1P14625 803 aaKnown RBP10.83□□□□□ -0.68
TMEM258-201ENST00000257262 LMNB1P20700 586 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 SLC4A10Q6U841 1118 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 UBE3BQ7Z3V4 1068 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 SLC51AQ86UW1 340 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 PTPRCP08575 1304 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 LTBP3Q9NS15 1303 aa10.83□□□□□ -0.68
TMEM258-201ENST00000257262 COL4A1P02462 1669 aa10.82□□□□□ -0.68
TMEM258-201ENST00000257262 MYH3P11055 1940 aa10.82□□□□□ -0.68
TMEM258-201ENST00000257262 DICER1Q9UPY3 1922 aaKnown RBP10.82□□□□□ -0.68
TMEM258-201ENST00000257262 TIAM2Q8IVF5 1701 aa10.82□□□□□ -0.68
TMEM258-201ENST00000257262 BBOX1O75936 387 aa10.82□□□□□ -0.68
TMEM258-201ENST00000257262 RARSP54136 660 aaKnown RBP10.82□□□□□ -0.68
TMEM258-201ENST00000257262 FKBP4Q02790 459 aaKnown RBP eCLIP10.82□□□□□ -0.68
TMEM258-201ENST00000257262 GRAPQ13588 217 aa10.82□□□□□ -0.68
TMEM258-201ENST00000257262 RTKN2Q8IZC4 609 aa10.82□□□□□ -0.68
TMEM258-201ENST00000257262 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
TMEM258-201ENST00000257262 ZNF526Q8TF50 670 aaPredicted RBP10.82□□□□□ -0.68
TMEM258-201ENST00000257262 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
TMEM258-201ENST00000257262 TAOK3Q9H2K8 898 aa10.82□□□□□ -0.68
TMEM258-201ENST00000257262 CASP7P55210 303 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 CC2D2BQ6DHV5 1058 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 SP8Q8IXZ3 490 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 CELF1Q92879 486 aaKnown RBP10.81□□□□□ -0.68
TMEM258-201ENST00000257262 MS4A3Q96HJ5 214 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 SRCIN1Q9C0H9 1055 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 SEC31BQ9NQW1 1179 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 NOB1Q9ULX3 412 aaKnown RBP10.81□□□□□ -0.68
TMEM258-201ENST00000257262 ATP6V0A2Q9Y487 856 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 SNED1Q8TER0 1413 aa10.81□□□□□ -0.68
TMEM258-201ENST00000257262 ALDH1L1O75891 902 aa10.8□□□□□ -0.68
TMEM258-201ENST00000257262 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
TMEM258-201ENST00000257262 BRPF1P55201 1214 aaPredicted RBP10.8□□□□□ -0.68
TMEM258-201ENST00000257262 CCDC152Q4G0S7 254 aa10.8□□□□□ -0.68
TMEM258-201ENST00000257262 TTLL11Q8NHH1 800 aa10.8□□□□□ -0.68
TMEM258-201ENST00000257262 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
TMEM258-201ENST00000257262 TMX4Q9H1E5 349 aaPredicted RBP10.8□□□□□ -0.68
TMEM258-201ENST00000257262 ZNF277Q9NRM2 450 aaPredicted RBP10.8□□□□□ -0.68
TMEM258-201ENST00000257262 CEP350Q5VT06 3117 aa10.8□□□□□ -0.68
TMEM258-201ENST00000257262 BCAR3O75815 825 aa10.79□□□□□ -0.68
TMEM258-201ENST00000257262 CTSWP56202 376 aa10.79□□□□□ -0.68
TMEM258-201ENST00000257262 RPS8P62241 208 aaKnown RBP10.79□□□□□ -0.68
TMEM258-201ENST00000257262 GRIPAP1Q4V328 841 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms