RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 PKP1Q13835 747 aa11.7□□□□□ -0.54
TRPM1-201ENST00000256552 G3V3G9 751 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 ANKRD36BQ8N2N9 1353 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 MIS18AQ9NYP9 233 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 ARHGAP45Q92619 1136 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 PTPRKQ15262 1439 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 ALS2CR12Q96Q35 445 aa11.69□□□□□ -0.54
TRPM1-201ENST00000256552 TUBBP07437 444 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 SLFN14P0C7P3 912 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 CYP2C19P33261 490 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 NCBP1Q09161 790 aaKnown RBP11.68□□□□□ -0.54
TRPM1-201ENST00000256552 TCEANC2Q96MN5 208 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 CHMP4BP1P59074 171 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 EHBP1Q8NDI1 1231 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 TRIM6Q9C030 488 aaPredicted RBP11.68□□□□□ -0.54
TRPM1-201ENST00000256552 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 IL16Q14005 1332 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 ARHGAP25P42331 645 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 CCDC141Q6ZP82 1450 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 NDUFAB1O14561 156 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 KIF5BP33176 963 aa11.68□□□□□ -0.54
TRPM1-201ENST00000256552 CTDP1Q9Y5B0 961 aaPredicted RBP11.68□□□□□ -0.54
TRPM1-201ENST00000256552 WDHD1O75717 1129 aaPredicted RBP11.67□□□□□ -0.54
TRPM1-201ENST00000256552 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 ANKRD44Q8N8A2 993 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 EXOC4Q96A65 974 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 CAPZA3Q96KX2 299 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 FAM184BQ9ULE4 1060 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 SYKP43405 635 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 N4BP2L2Q92802 583 aaPredicted RBP11.67□□□□□ -0.54
TRPM1-201ENST00000256552 CHAMP1Q96JM3 812 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 RALGAPBQ86X10 1494 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 BRD1O95696 1058 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 PEX19P40855 299 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 JARID2Q92833 1246 aaPredicted RBP11.67□□□□□ -0.54
TRPM1-201ENST00000256552 PDLIM2Q96JY6 352 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 MCM10Q7L590 875 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 MRFAP1L1Q96HT8 127 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 ODF2LQ9ULJ1 636 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 DCTPP1Q9H773 170 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 CABP1Q9NZU7 370 aa11.67□□□□□ -0.54
TRPM1-201ENST00000256552 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-201ENST00000256552 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-201ENST00000256552 ABCC5O15440 1437 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 TTC39AQ5SRH9 613 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 FKBP15Q5T1M5 1219 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 ANKRD7Q92527 254 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 WASF1Q92558 559 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 CLSTN2Q9H4D0 955 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 ELP1O95163 1332 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 MTMR7Q9Y216 660 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 EVI5LQ96CN4 794 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 MBIPQ9NS73 344 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 PTPRCP08575 1304 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 GAPVD1Q14C86 1478 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 FANCD2Q9BXW9 1451 aa11.66□□□□□ -0.54
TRPM1-201ENST00000256552 GOLGA6CA6NDK9 693 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 N4BP3O15049 544 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 GOLGA6DP0CG33 693 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 NAP1L3Q99457 506 aaPredicted RBP11.65□□□□□ -0.54
TRPM1-201ENST00000256552 DDX23Q9BUQ8 820 aaKnown RBP11.65□□□□□ -0.54
TRPM1-201ENST00000256552 GOLGA6AQ9NYA3 693 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 KIAA1524Q8TCG1 905 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 NEK1Q96PY6 1258 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 MEIS3Q99687 375 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 JPH2Q9BR39 696 aaPredicted RBP11.65□□□□□ -0.54
TRPM1-201ENST00000256552 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 KIF4AO95239 1232 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 ZFYP08048 801 aaPredicted RBP11.65□□□□□ -0.54
TRPM1-201ENST00000256552 LIG3P49916 1009 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 CCDC158Q5M9N0 1113 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
TRPM1-201ENST00000256552 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.54
TRPM1-201ENST00000256552 BRF1Q92994 677 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 MED4Q9NPJ6 270 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 ZNF513Q8N8E2 541 aaPredicted RBP11.65□□□□□ -0.54
TRPM1-201ENST00000256552 ANKS4BQ8N8V4 417 aa11.65□□□□□ -0.54
TRPM1-201ENST00000256552 CETN2P41208 172 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 CEP85LQ5SZL2 805 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 SRLQ86TD4 932 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 CCDC8Q9H0W5 538 aaPredicted RBP11.64□□□□□ -0.55
TRPM1-201ENST00000256552 NOL3O60936 208 aaKnown RBP11.64□□□□□ -0.55
TRPM1-201ENST00000256552 ARMC2Q8NEN0 867 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 CAPN7Q9Y6W3 813 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 A6NNZ2 444 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRPM1-201ENST00000256552 TUBB8Q3ZCM7 444 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
TRPM1-201ENST00000256552 FBF1Q8TES7 1133 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 478 ms