RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 DUOX2Q9NRD8 1548 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 RPAINQ86UA6 219 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 CEP63Q96MT8 703 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 SEPT11Q9NVA2 429 aaKnown RBP12.56□□□□□ -0.4
DCLK1-201ENST00000255448 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 A2MP01023 1474 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 ZSCAN29Q8IWY8 852 aaPredicted RBP12.56□□□□□ -0.4
DCLK1-201ENST00000255448 FAM76AQ8TAV0 307 aa12.56□□□□□ -0.4
DCLK1-201ENST00000255448 CCDC160A6NGH7 325 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 PTPRCP08575 1304 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 WDR7Q9Y4E6 1490 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 SPATA24Q86W54 205 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 NEK11Q8NG66 645 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 MYD88Q99836 296 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 PCDHB15Q9Y5E8 787 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 OAS2P29728 719 aaKnown RBP12.55□□□□□ -0.4
DCLK1-201ENST00000255448 TOM1O60784 492 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 PPP2R3AQ06190 1150 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 IFIT5Q13325 482 aaKnown RBP12.55□□□□□ -0.4
DCLK1-201ENST00000255448 AOPEPQ8N6M6 819 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 CNNM3Q8NE01 707 aa12.55□□□□□ -0.4
DCLK1-201ENST00000255448 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
DCLK1-201ENST00000255448 MPRIPQ6WCQ1 1025 aa12.54□□□□□ -0.4
DCLK1-201ENST00000255448 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
DCLK1-201ENST00000255448 RABEP2Q9H5N1 569 aa12.54□□□□□ -0.4
DCLK1-201ENST00000255448 ZNF445P59923 1031 aa12.54□□□□□ -0.4
DCLK1-201ENST00000255448 CKAP4Q07065 602 aaKnown RBP12.54□□□□□ -0.4
DCLK1-201ENST00000255448 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
DCLK1-201ENST00000255448 WDR66Q8TBY9 1149 aa12.54□□□□□ -0.4
DCLK1-201ENST00000255448 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 FMNL3Q8IVF7 1028 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 ACEP12821 1306 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 TRIM27P14373 513 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 GCKP35557 465 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
DCLK1-201ENST00000255448 ALS2CR12Q96Q35 445 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 CTAGE9A4FU28 777 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 DNM1Q05193 864 aaKnown RBP12.53□□□□□ -0.4
DCLK1-201ENST00000255448 ANKS4BQ8N8V4 417 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 IL16Q14005 1332 aa12.53□□□□□ -0.4
DCLK1-201ENST00000255448 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
DCLK1-201ENST00000255448 NUP160Q12769 1436 aa12.52□□□□□ -0.4
DCLK1-201ENST00000255448 GSTTP1A0A1W2PQM5 241 aa12.52□□□□□ -0.4
DCLK1-201ENST00000255448 NDUFAB1O14561 156 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 CPLX4Q7Z7G2 160 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
DCLK1-201ENST00000255448 SLC5A1P13866 664 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 AP1ARQ63HQ0 302 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
DCLK1-201ENST00000255448 CACNA2D4Q7Z3S7 1137 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
DCLK1-201ENST00000255448 BRD2P25440 801 aaKnown RBP12.51□□□□□ -0.41
DCLK1-201ENST00000255448 MAP3K12Q12852 859 aa12.51□□□□□ -0.41
DCLK1-201ENST00000255448 FKBP15Q5T1M5 1219 aa12.51□□□□□ -0.41
DCLK1-201ENST00000255448 ANKRD18BA2A2Z9 1011 aa12.51□□□□□ -0.41
DCLK1-201ENST00000255448 ABCC10Q5T3U5 1492 aa12.51□□□□□ -0.41
DCLK1-201ENST00000255448 C6orf163Q5TEZ5 329 aa12.51□□□□□ -0.41
DCLK1-201ENST00000255448 FLIIQ13045 1269 aa12.51□□□□□ -0.41
DCLK1-201ENST00000255448 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
DCLK1-201ENST00000255448 CARD6Q9BX69 1037 aa12.51□□□□□ -0.41
DCLK1-201ENST00000255448 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 NSRP1Q9H0G5 558 aaKnown RBP12.5□□□□□ -0.41
DCLK1-201ENST00000255448 LZTFL1Q9NQ48 299 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 ZNF622Q969S3 477 aaKnown RBP eCLIP12.5□□□□□ -0.41
DCLK1-201ENST00000255448 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
DCLK1-201ENST00000255448 RALGAPBQ86X10 1494 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 BUB1BO60566 1050 aaPredicted RBP12.5□□□□□ -0.41
DCLK1-201ENST00000255448 LMOD1P29536 600 aaPredicted RBP12.5□□□□□ -0.41
DCLK1-201ENST00000255448 NUCB1Q02818 461 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 F13A1P00488 732 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 EHBP1Q8NDI1 1231 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
DCLK1-201ENST00000255448 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
DCLK1-201ENST00000255448 A0A087WZG4 1122 aa12.49□□□□□ -0.41
DCLK1-201ENST00000255448 TUBB4BP68371 445 aa12.49□□□□□ -0.41
DCLK1-201ENST00000255448 DAAM2Q86T65 1068 aa12.49□□□□□ -0.41
DCLK1-201ENST00000255448 USP5P45974 858 aa12.49□□□□□ -0.41
DCLK1-201ENST00000255448 CEP131Q9UPN4 1083 aa12.49□□□□□ -0.41
DCLK1-201ENST00000255448 NUP153P49790 1475 aaKnown RBP12.49□□□□□ -0.41
DCLK1-201ENST00000255448 HMGB1P09429 215 aaKnown RBP12.49□□□□□ -0.41
DCLK1-201ENST00000255448 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
DCLK1-201ENST00000255448 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms