RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 SNED1Q8TER0 1413 aa27.38■■□□□ 1.97
NXT1-201ENST00000254998 PPEF1O14829 653 aaPredicted RBP27.37■■□□□ 1.97
NXT1-201ENST00000254998 GRIPAP1Q4V328 841 aa27.37■■□□□ 1.97
NXT1-201ENST00000254998 KIF16BQ96L93 1317 aa27.37■■□□□ 1.97
NXT1-201ENST00000254998 LMNB1P20700 586 aa27.36■■□□□ 1.97
NXT1-201ENST00000254998 CCDC152Q4G0S7 254 aa27.36■■□□□ 1.97
NXT1-201ENST00000254998 C9orf131Q5VYM1 1079 aa27.36■■□□□ 1.97
NXT1-201ENST00000254998 TMC4Q7Z404 712 aa27.36■■□□□ 1.97
NXT1-201ENST00000254998 TAOK3Q9H2K8 898 aa27.36■■□□□ 1.97
NXT1-201ENST00000254998 CTSWP56202 376 aa27.35■■□□□ 1.97
NXT1-201ENST00000254998 OLFM4Q6UX06 510 aa27.35■■□□□ 1.97
NXT1-201ENST00000254998 ARHGAP45Q92619 1136 aa27.35■■□□□ 1.97
NXT1-201ENST00000254998 NOB1Q9ULX3 412 aaKnown RBP27.35■■□□□ 1.97
NXT1-201ENST00000254998 ATP6V0A2Q9Y487 856 aa27.35■■□□□ 1.97
NXT1-201ENST00000254998 MYH3P11055 1940 aa27.34■■□□□ 1.97
NXT1-201ENST00000254998 GRM8O00222 908 aa27.34■■□□□ 1.97
NXT1-201ENST00000254998 PRELPP51888 382 aa27.34■■□□□ 1.97
NXT1-201ENST00000254998 API5Q9BZZ5 524 aaKnown RBP27.34■■□□□ 1.97
NXT1-201ENST00000254998 RTL9Q8NET4 1388 aa27.34■■□□□ 1.97
NXT1-201ENST00000254998 FKBP4Q02790 459 aaKnown RBP eCLIP27.33■■□□□ 1.97
NXT1-201ENST00000254998 TTLL11Q8NHH1 800 aa27.33■■□□□ 1.97
NXT1-201ENST00000254998 RNF181Q9P0P0 153 aa27.33■■□□□ 1.97
NXT1-201ENST00000254998 SP8Q8IXZ3 490 aa27.32■■□□□ 1.96
NXT1-201ENST00000254998 PSMD1Q99460 953 aa27.32■■□□□ 1.96
NXT1-201ENST00000254998 TAF1P21675 1872 aa27.32■■□□□ 1.96
NXT1-201ENST00000254998 CELF1Q92879 486 aaKnown RBP27.31■■□□□ 1.96
NXT1-201ENST00000254998 C9orf78Q9NZ63 289 aaPredicted RBP27.31■■□□□ 1.96
NXT1-201ENST00000254998 UTYO14607 1347 aa27.31■■□□□ 1.96
NXT1-201ENST00000254998 ZC3H4Q9UPT8 1303 aaKnown RBP27.31■■□□□ 1.96
NXT1-201ENST00000254998 TMX4Q9H1E5 349 aaPredicted RBP27.3■■□□□ 1.96
NXT1-201ENST00000254998 IPO8O15397 1037 aaKnown RBP27.29■■□□□ 1.96
NXT1-201ENST00000254998 BCAR3O75815 825 aa27.29■■□□□ 1.96
NXT1-201ENST00000254998 CSF1RP07333 972 aa27.29■■□□□ 1.96
NXT1-201ENST00000254998 RPS8P62241 208 aaKnown RBP27.29■■□□□ 1.96
NXT1-201ENST00000254998 ZNF784Q8NCA9 323 aaPredicted RBP27.29■■□□□ 1.96
NXT1-201ENST00000254998 SEC31BQ9NQW1 1179 aa27.29■■□□□ 1.96
NXT1-201ENST00000254998 LRRC37AA6NMS7 1700 aa27.29■■□□□ 1.96
NXT1-201ENST00000254998 CCDC88AQ3V6T2 1871 aa27.28■■□□□ 1.96
NXT1-201ENST00000254998 COL4A1P02462 1669 aa27.28■■□□□ 1.96
NXT1-201ENST00000254998 CCT4P50991 539 aaKnown RBP27.28■■□□□ 1.96
NXT1-201ENST00000254998 DICER1Q9UPY3 1922 aaKnown RBP27.28■■□□□ 1.96
NXT1-201ENST00000254998 SLC51AQ86UW1 340 aa27.27■■□□□ 1.96
NXT1-201ENST00000254998 FOXO4P98177 505 aa27.26■■□□□ 1.95
NXT1-201ENST00000254998 CDC5LQ99459 802 aaKnown RBP27.26■■□□□ 1.95
NXT1-201ENST00000254998 GREM2Q9H772 168 aa27.26■■□□□ 1.95
NXT1-201ENST00000254998 CCDC85AQ96PX6 553 aaPredicted RBP27.25■■□□□ 1.95
NXT1-201ENST00000254998 RTFDC1Q9BY42 306 aaPredicted RBP27.25■■□□□ 1.95
NXT1-201ENST00000254998 NBPF7P0C2Y1 421 aaPredicted RBP27.24■■□□□ 1.95
NXT1-201ENST00000254998 USP44Q9H0E7 712 aa27.24■■□□□ 1.95
NXT1-201ENST00000254998 ZNF277Q9NRM2 450 aaPredicted RBP27.24■■□□□ 1.95
NXT1-201ENST00000254998 ATF7IPQ6VMQ6 1270 aa27.23■■□□□ 1.95
NXT1-201ENST00000254998 ANKRD18AQ8IVF6 992 aa27.23■■□□□ 1.95
NXT1-201ENST00000254998 MPNDQ8N594 471 aa27.23■■□□□ 1.95
NXT1-201ENST00000254998 TIAM2Q8IVF5 1701 aa27.22■■□□□ 1.95
NXT1-201ENST00000254998 TRIM27P14373 513 aa27.22■■□□□ 1.95
NXT1-201ENST00000254998 IARSP41252 1262 aaKnown RBP27.22■■□□□ 1.95
NXT1-201ENST00000254998 DPP8Q6V1X1 898 aaPredicted RBP27.22■■□□□ 1.95
NXT1-201ENST00000254998 VPS33BQ9H267 617 aa27.22■■□□□ 1.95
NXT1-201ENST00000254998 FAM161AQ3B820 660 aa27.21■■□□□ 1.95
NXT1-201ENST00000254998 EPHA10Q5JZY3 1008 aa27.21■■□□□ 1.95
NXT1-201ENST00000254998 INTS3Q68E01 1043 aaKnown RBP27.21■■□□□ 1.95
NXT1-201ENST00000254998 SUPT20HQ8NEM7 779 aa27.21■■□□□ 1.95
NXT1-201ENST00000254998 FRAT1Q92837 279 aaPredicted RBP27.21■■□□□ 1.95
NXT1-201ENST00000254998 SUCLG2Q96I99 432 aa27.21■■□□□ 1.95
NXT1-201ENST00000254998 ITGA6P23229 1130 aa27.2■■□□□ 1.94
NXT1-201ENST00000254998 ZKSCAN2Q63HK3 967 aa27.2■■□□□ 1.94
NXT1-201ENST00000254998 KAZALD1Q96I82 304 aa27.2■■□□□ 1.94
NXT1-201ENST00000254998 LMBR1LQ6UX01 489 aa27.19■■□□□ 1.94
NXT1-201ENST00000254998 BSDC1Q9NW68 430 aaPredicted RBP27.19■■□□□ 1.94
NXT1-201ENST00000254998 LTBP1Q14766 1721 aa27.19■■□□□ 1.94
NXT1-201ENST00000254998 DUOX1Q9NRD9 1551 aa27.18■■□□□ 1.94
NXT1-201ENST00000254998 PODXL2Q9NZ53 605 aa27.18■■□□□ 1.94
NXT1-201ENST00000254998 ANKRD18BA2A2Z9 1011 aa27.17■■□□□ 1.94
NXT1-201ENST00000254998 GPSM2P81274 684 aa27.17■■□□□ 1.94
NXT1-201ENST00000254998 RABL6Q3YEC7 729 aaPredicted RBP27.17■■□□□ 1.94
NXT1-201ENST00000254998 IGHMBP2P38935 993 aaKnown RBP27.16■■□□□ 1.94
NXT1-201ENST00000254998 IFIT5Q13325 482 aaKnown RBP27.16■■□□□ 1.94
NXT1-201ENST00000254998 NSFL1CQ9UNZ2 370 aaKnown RBP27.16■■□□□ 1.94
NXT1-201ENST00000254998 BICC1Q9H694 974 aaKnown RBP27.15■■□□□ 1.94
NXT1-201ENST00000254998 GPBP1L1Q9HC44 474 aaPredicted RBP27.15■■□□□ 1.94
NXT1-201ENST00000254998 GLTPD2A6NH11 291 aa27.14■■□□□ 1.94
NXT1-201ENST00000254998 LARGE2Q8N3Y3 721 aa27.14■■□□□ 1.94
NXT1-201ENST00000254998 ANKRD44Q8N8A2 993 aa27.14■■□□□ 1.94
NXT1-201ENST00000254998 JDP2Q8WYK2 163 aa27.14■■□□□ 1.94
NXT1-201ENST00000254998 TNNQ9UQP3 1299 aa27.14■■□□□ 1.94
NXT1-201ENST00000254998 CHMP3Q9Y3E7 222 aa27.14■■□□□ 1.94
NXT1-201ENST00000254998 KDM2BQ8NHM5 1336 aa27.14■■□□□ 1.93
NXT1-201ENST00000254998 FZD9O00144 591 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 PPIP5K2O43314 1243 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 KIAA2012Q0VF49 1180 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 CCDC57Q2TAC2 916 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 MINPP1Q9UNW1 487 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 HDAC5Q9UQL6 1122 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 COL4A5P29400 1685 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 XDHP47989 1333 aa27.13■■□□□ 1.93
NXT1-201ENST00000254998 SPEF2Q9C093 1822 aa27.12■■□□□ 1.93
NXT1-201ENST00000254998 UBTFL1P0CB47 393 aaPredicted RBP27.12■■□□□ 1.93
NXT1-201ENST00000254998 TBC1D16Q8TBP0 767 aa27.12■■□□□ 1.93
NXT1-201ENST00000254998 ZNF526Q8TF50 670 aaPredicted RBP27.12■■□□□ 1.93
NXT1-201ENST00000254998 MPHOSPH8Q99549 860 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms