RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SP8Q8IXZ3 490 aa22.84■■□□□ 1.25
SNRPA1-201ENST00000254193 TMX4Q9H1E5 349 aaPredicted RBP22.84■■□□□ 1.25
SNRPA1-201ENST00000254193 SEC31BQ9NQW1 1179 aa22.84■■□□□ 1.25
SNRPA1-201ENST00000254193 SNED1Q8TER0 1413 aa22.83■■□□□ 1.25
SNRPA1-201ENST00000254193 ALDH1L2Q3SY69 923 aa22.83■■□□□ 1.25
SNRPA1-201ENST00000254193 CCDC152Q4G0S7 254 aa22.83■■□□□ 1.25
SNRPA1-201ENST00000254193 PSMD1Q99460 953 aa22.83■■□□□ 1.25
SNRPA1-201ENST00000254193 SMC4Q9NTJ3 1288 aa22.83■■□□□ 1.25
SNRPA1-201ENST00000254193 CTSWP56202 376 aa22.82■■□□□ 1.24
SNRPA1-201ENST00000254193 GRIPAP1Q4V328 841 aa22.82■■□□□ 1.24
SNRPA1-201ENST00000254193 ZC3H4Q9UPT8 1303 aaKnown RBP22.82■■□□□ 1.24
SNRPA1-201ENST00000254193 CASP7P55210 303 aa22.81■■□□□ 1.24
SNRPA1-201ENST00000254193 NMRK2Q9NPI5 230 aa22.81■■□□□ 1.24
SNRPA1-201ENST00000254193 IARSP41252 1262 aaKnown RBP22.8■■□□□ 1.24
SNRPA1-201ENST00000254193 RPS8P62241 208 aaKnown RBP22.8■■□□□ 1.24
SNRPA1-201ENST00000254193 TTLL11Q8NHH1 800 aa22.8■■□□□ 1.24
SNRPA1-201ENST00000254193 PTPRCP08575 1304 aa22.8■■□□□ 1.24
SNRPA1-201ENST00000254193 TMC4Q7Z404 712 aa22.79■■□□□ 1.24
SNRPA1-201ENST00000254193 SRCIN1Q9C0H9 1055 aa22.79■■□□□ 1.24
SNRPA1-201ENST00000254193 KDM2BQ8NHM5 1336 aa22.79■■□□□ 1.24
SNRPA1-201ENST00000254193 GLTPD2A6NH11 291 aa22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 ALDH1L1O75891 902 aa22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 RARSP54136 660 aaKnown RBP22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 DPP8Q6V1X1 898 aaPredicted RBP22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 DDX60Q8IY21 1712 aaKnown RBP22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 MPNDQ8N594 471 aa22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 PLA2G12BQ9BX93 195 aa22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 GREM2Q9H772 168 aa22.78■■□□□ 1.24
SNRPA1-201ENST00000254193 FER1L6Q2WGJ9 1857 aa22.77■■□□□ 1.24
SNRPA1-201ENST00000254193 KIF3CO14782 793 aa22.77■■□□□ 1.24
SNRPA1-201ENST00000254193 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
SNRPA1-201ENST00000254193 GRM8O00222 908 aa22.76■■□□□ 1.23
SNRPA1-201ENST00000254193 DPY19L2Q6NUT2 758 aa22.76■■□□□ 1.23
SNRPA1-201ENST00000254193 RTFDC1Q9BY42 306 aaPredicted RBP22.76■■□□□ 1.23
SNRPA1-201ENST00000254193 C9orf78Q9NZ63 289 aaPredicted RBP22.76■■□□□ 1.23
SNRPA1-201ENST00000254193 NOB1Q9ULX3 412 aaKnown RBP22.76■■□□□ 1.23
SNRPA1-201ENST00000254193 ZBED9Q6R2W3 1325 aa22.76■■□□□ 1.23
SNRPA1-201ENST00000254193 COL4A1P02462 1669 aa22.75■■□□□ 1.23
SNRPA1-201ENST00000254193 LARGE2Q8N3Y3 721 aa22.75■■□□□ 1.23
SNRPA1-201ENST00000254193 RRAGCQ9HB90 399 aa22.75■■□□□ 1.23
SNRPA1-201ENST00000254193 NSFL1CQ9UNZ2 370 aaKnown RBP22.75■■□□□ 1.23
SNRPA1-201ENST00000254193 LAMB2P55268 1798 aa22.75■■□□□ 1.23
SNRPA1-201ENST00000254193 GPSM2P81274 684 aa22.74■■□□□ 1.23
SNRPA1-201ENST00000254193 AOC3Q16853 763 aa22.74■■□□□ 1.23
SNRPA1-201ENST00000254193 ANKRD18AQ8IVF6 992 aa22.74■■□□□ 1.23
SNRPA1-201ENST00000254193 JDP2Q8WYK2 163 aa22.74■■□□□ 1.23
SNRPA1-201ENST00000254193 SBF1O95248 1867 aa22.74■■□□□ 1.23
SNRPA1-201ENST00000254193 PPIP5K2O43314 1243 aa22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 DDNO94850 711 aaPredicted RBP22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 CSF1RP07333 972 aa22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 BRPF1P55201 1214 aaPredicted RBP22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 FOXO4P98177 505 aa22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 FAM161AQ3B820 660 aa22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 SUPT20HQ8NEM7 779 aa22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 CDC5LQ99459 802 aaKnown RBP22.73■■□□□ 1.23
SNRPA1-201ENST00000254193 C1QTNF8P60827 252 aa22.72■■□□□ 1.23
SNRPA1-201ENST00000254193 EPHA10Q5JZY3 1008 aa22.72■■□□□ 1.23
SNRPA1-201ENST00000254193 ZNF541Q9H0D2 1346 aa22.72■■□□□ 1.23
SNRPA1-201ENST00000254193 RTL9Q8NET4 1388 aa22.72■■□□□ 1.23
SNRPA1-201ENST00000254193 FZD9O00144 591 aa22.71■■□□□ 1.23
SNRPA1-201ENST00000254193 NBPF7P0C2Y1 421 aaPredicted RBP22.71■■□□□ 1.23
SNRPA1-201ENST00000254193 ITGA6P23229 1130 aa22.71■■□□□ 1.23
SNRPA1-201ENST00000254193 NIM1KQ8IY84 436 aa22.7■■□□□ 1.22
SNRPA1-201ENST00000254193 VPS33BQ9H267 617 aa22.7■■□□□ 1.22
SNRPA1-201ENST00000254193 POLLQ9UGP5 575 aa22.7■■□□□ 1.22
SNRPA1-201ENST00000254193 CACNA1FO60840 1977 aa22.7■■□□□ 1.22
SNRPA1-201ENST00000254193 COL4A5P29400 1685 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 C6orf229H3BNL8 230 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 BCAR3O75815 825 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 KIAA2012Q0VF49 1180 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 LMBR1LQ6UX01 489 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 SUCLG2Q96I99 432 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 API5Q9BZZ5 524 aaKnown RBP22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 ANKIB1Q9P2G1 1089 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 CHMP3Q9Y3E7 222 aa22.69■■□□□ 1.22
SNRPA1-201ENST00000254193 UTYO14607 1347 aa22.68■■□□□ 1.22
SNRPA1-201ENST00000254193 POTECB2RU33 542 aa22.68■■□□□ 1.22
SNRPA1-201ENST00000254193 VEGFAP15692 232 aaPredicted RBP22.68■■□□□ 1.22
SNRPA1-201ENST00000254193 TBC1D16Q8TBP0 767 aa22.68■■□□□ 1.22
SNRPA1-201ENST00000254193 GPR101Q96P66 508 aaPredicted RBP22.68■■□□□ 1.22
SNRPA1-201ENST00000254193 BSDC1Q9NW68 430 aaPredicted RBP22.68■■□□□ 1.22
SNRPA1-201ENST00000254193 TAF1P21675 1872 aa22.67■■□□□ 1.22
SNRPA1-201ENST00000254193 EIF6P56537 245 aaKnown RBP22.67■■□□□ 1.22
SNRPA1-201ENST00000254193 WASHC4Q2M389 1173 aa22.67■■□□□ 1.22
SNRPA1-201ENST00000254193 KAZALD1Q96I82 304 aa22.67■■□□□ 1.22
SNRPA1-201ENST00000254193 USP44Q9H0E7 712 aa22.67■■□□□ 1.22
SNRPA1-201ENST00000254193 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
SNRPA1-201ENST00000254193 KIF16BQ96L93 1317 aa22.66■■□□□ 1.22
SNRPA1-201ENST00000254193 ANKRD18BA2A2Z9 1011 aa22.66■■□□□ 1.22
SNRPA1-201ENST00000254193 RIMBP2O15034 1052 aa22.66■■□□□ 1.22
SNRPA1-201ENST00000254193 IGHMBP2P38935 993 aaKnown RBP22.66■■□□□ 1.22
SNRPA1-201ENST00000254193 C16orf71Q8IYS4 520 aaPredicted RBP22.66■■□□□ 1.22
SNRPA1-201ENST00000254193 MINPP1Q9UNW1 487 aa22.66■■□□□ 1.22
SNRPA1-201ENST00000254193 TIAM2Q8IVF5 1701 aa22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 TOMM70O94826 608 aa22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 UFL1O94874 794 aa22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 CCT4P50991 539 aaKnown RBP22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 IFIT5Q13325 482 aaKnown RBP22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 ARHGAP45Q92619 1136 aa22.65■■□□□ 1.22
SNRPA1-201ENST00000254193 FRAT1Q92837 279 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms