RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 BICDL1Q6ZP65 573 aa13.89□□□□□ -0.19
CLUHP3-201ENST00000254109 COL23A1Q86Y22 540 aaPredicted RBP13.89□□□□□ -0.19
CLUHP3-201ENST00000254109 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 FAM177BA6PVY3 158 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 GRM8O00222 908 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 ST18O60284 1047 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 MCCP23508 829 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 MCM4P33991 863 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 DDIT3P35638 169 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 SLC15A2Q16348 729 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 HSP90AB3PQ58FF7 597 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 TBC1D9BQ66K14 1250 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 CWC25Q9NXE8 425 aaPredicted RBP13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
CLUHP3-201ENST00000254109 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 NLRP10Q86W26 655 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 ERC1Q8IUD2 1116 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 ESYT1Q9BSJ8 1104 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 GYS1P13807 737 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 CLEC4GQ6UXB4 293 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 UBE3BQ7Z3V4 1068 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 SYNE4Q8N205 404 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 ZNF652Q9Y2D9 606 aa13.87□□□□□ -0.19
CLUHP3-201ENST00000254109 CHMLP26374 656 aa13.86□□□□□ -0.19
CLUHP3-201ENST00000254109 SUCLG2Q96I99 432 aa13.86□□□□□ -0.19
CLUHP3-201ENST00000254109 UTYO14607 1347 aa13.86□□□□□ -0.19
CLUHP3-201ENST00000254109 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 H7C1W4 665 aa13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 CASP7P55210 303 aa13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 CLASRPQ8N2M8 674 aaKnown RBP13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 FAM89AQ96GI7 184 aa13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 KAZALD1Q96I82 304 aa13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 PDGFDQ9GZP0 370 aaPredicted RBP13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
CLUHP3-201ENST00000254109 TTC41PQ6P2S7 1318 aa13.84□□□□□ -0.19
CLUHP3-201ENST00000254109 EPHA10Q5JZY3 1008 aa13.84□□□□□ -0.19
CLUHP3-201ENST00000254109 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
CLUHP3-201ENST00000254109 GPATCH3Q96I76 525 aa13.84□□□□□ -0.19
CLUHP3-201ENST00000254109 TRMT112Q9UI30 125 aaKnown RBP13.84□□□□□ -0.19
CLUHP3-201ENST00000254109 EPB41L2O43491 1005 aaKnown RBP13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 PCCAP05165 728 aaPredicted RBP13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 NFIXQ14938 502 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 RAB3GAP1Q15042 981 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 ZBTB38Q8NAP3 1195 aaPredicted RBP13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 PI4K2BQ8TCG2 481 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 RGL2O15211 777 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 PTMSP20962 102 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 PARP10Q53GL7 1025 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 MSL1Q68DK7 614 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 SETDB2Q96T68 719 aa13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 UTP14AQ9BVJ6 771 aaKnown RBP13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
CLUHP3-201ENST00000254109 GLRX3O76003 335 aaKnown RBP13.82□□□□□ -0.2
CLUHP3-201ENST00000254109 NTSR2O95665 410 aa13.82□□□□□ -0.2
CLUHP3-201ENST00000254109 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
CLUHP3-201ENST00000254109 ANAPC15P60006 121 aa13.82□□□□□ -0.2
CLUHP3-201ENST00000254109 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLUHP3-201ENST00000254109 TNPO1Q92973 898 aaKnown RBP13.82□□□□□ -0.2
CLUHP3-201ENST00000254109 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
CLUHP3-201ENST00000254109 MCM2P49736 904 aa13.81□□□□□ -0.2
CLUHP3-201ENST00000254109 CCDC24Q8N4L8 307 aa13.81□□□□□ -0.2
CLUHP3-201ENST00000254109 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
CLUHP3-201ENST00000254109 MAP4K4O95819 1239 aaPredicted RBP13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 TM4SF1P30408 202 aa13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 IL27Q8NEV9 243 aa13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 COL24A1Q17RW2 1714 aa13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 IRS4O14654 1257 aaPredicted RBP13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 TRAK2O60296 914 aa13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 HCLS1P14317 486 aaPredicted RBP13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 FOXO4P98177 505 aa13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 PA2G4Q9UQ80 394 aaKnown RBP13.8□□□□□ -0.2
CLUHP3-201ENST00000254109 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
CLUHP3-201ENST00000254109 NEK4P51957 841 aa13.79□□□□□ -0.2
CLUHP3-201ENST00000254109 NUCB2P80303 420 aa13.79□□□□□ -0.2
CLUHP3-201ENST00000254109 DDR1Q08345 913 aa13.79□□□□□ -0.2
CLUHP3-201ENST00000254109 CDHR2Q9BYE9 1310 aa13.79□□□□□ -0.2
CLUHP3-201ENST00000254109 R3HDM1Q15032 1099 aaKnown RBP13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 LMBR1LQ6UX01 489 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 KIAA1211Q6ZU35 1233 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 AACSQ86V21 672 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 NLGN1Q8N2Q7 840 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 RUFY2Q8WXA3 655 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 CARMIL3Q8ND23 1372 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 SERPINB2P05120 415 aa13.78□□□□□ -0.2
CLUHP3-201ENST00000254109 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms