RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 CROCC2H7BZ55 1655 aa19.93■□□□□ 0.78
ACTN4-201ENST00000252699 PPFIA3O75145 1194 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 MCM5P33992 734 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 RAB11FIP4Q86YS3 637 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 CATIPQ7Z7H3 387 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 LRRC2Q9BYS8 371 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 ZNF521Q96K83 1311 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 SYCE3A1L190 88 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 CCAR1Q8IX12 1150 aaKnown RBP19.92■□□□□ 0.78
ACTN4-201ENST00000252699 TFCP2L1Q9NZI6 479 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 NECAB1Q8N987 351 aa19.92■□□□□ 0.78
ACTN4-201ENST00000252699 ABCC4O15439 1325 aa19.91■□□□□ 0.78
ACTN4-201ENST00000252699 CCNL1Q9UK58 526 aaPredicted RBP19.91■□□□□ 0.78
ACTN4-201ENST00000252699 CCDC173Q0VFZ6 552 aa19.91■□□□□ 0.78
ACTN4-201ENST00000252699 FILIP1LQ4L180 1135 aa19.91■□□□□ 0.78
ACTN4-201ENST00000252699 CCDC144CPQ8IYA2 1237 aa19.91■□□□□ 0.78
ACTN4-201ENST00000252699 TSPY2A6NKD2 308 aa19.91■□□□□ 0.78
ACTN4-201ENST00000252699 HCLS1P14317 486 aaPredicted RBP19.91■□□□□ 0.78
ACTN4-201ENST00000252699 CRNKL1Q9BZJ0 848 aaKnown RBP19.91■□□□□ 0.78
ACTN4-201ENST00000252699 GDPD2Q9HCC8 539 aa19.91■□□□□ 0.78
ACTN4-201ENST00000252699 ORC3Q9UBD5 711 aaPredicted RBP19.91■□□□□ 0.78
ACTN4-201ENST00000252699 SEC63Q9UGP8 760 aaKnown RBP19.91■□□□□ 0.78
ACTN4-201ENST00000252699 BRPF3Q9ULD4 1205 aa19.91■□□□□ 0.78
ACTN4-201ENST00000252699 IARSP41252 1262 aaKnown RBP19.9■□□□□ 0.78
ACTN4-201ENST00000252699 PDE4BQ07343 736 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 MAP3K11Q16584 847 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 IL27Q8NEV9 243 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 EPS15P42566 896 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 PARP10Q53GL7 1025 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 TFIP11Q9UBB9 837 aaKnown RBP19.9■□□□□ 0.78
ACTN4-201ENST00000252699 TRPM1Q7Z4N2 1603 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 BRPF1P55201 1214 aaPredicted RBP19.9■□□□□ 0.78
ACTN4-201ENST00000252699 SSRP1Q08945 709 aaKnown RBP19.9■□□□□ 0.78
ACTN4-201ENST00000252699 SPC24Q8NBT2 197 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 CEP131Q9UPN4 1083 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 NAA16Q6N069 864 aaPredicted RBP19.9■□□□□ 0.78
ACTN4-201ENST00000252699 SLC4A4Q9Y6R1 1079 aa19.9■□□□□ 0.78
ACTN4-201ENST00000252699 SLC4A8Q2Y0W8 1093 aa19.89■□□□□ 0.78
ACTN4-201ENST00000252699 CEP57L1Q8IYX8 460 aa19.89■□□□□ 0.78
ACTN4-201ENST00000252699 USP44Q9H0E7 712 aa19.89■□□□□ 0.77
ACTN4-201ENST00000252699 RNF113AO15541 343 aaKnown RBP19.89■□□□□ 0.77
ACTN4-201ENST00000252699 SERPINC1P01008 464 aa19.89■□□□□ 0.77
ACTN4-201ENST00000252699 CAMK4Q16566 473 aa19.89■□□□□ 0.77
ACTN4-201ENST00000252699 NSFL1CQ9UNZ2 370 aaKnown RBP19.89■□□□□ 0.77
ACTN4-201ENST00000252699 TRAPPC3LQ5T215 181 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 CCDC87Q9NVE4 849 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.88■□□□□ 0.77
ACTN4-201ENST00000252699 KLF18A0A0U1RQI7 1052 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 A0A1B0GUL7 405 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 ITGA6P23229 1130 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.771e-6■■□□□ 13.3
ACTN4-201ENST00000252699 MPNDQ8N594 471 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 DBNDD2Q9BQY9 259 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 MAGEC2Q9UBF1 373 aaPredicted RBP19.88■□□□□ 0.77
ACTN4-201ENST00000252699 BAG4O95429 457 aaKnown RBP19.88■□□□□ 0.77
ACTN4-201ENST00000252699 SNX21Q969T3 373 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 ZHX3Q9H4I2 956 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 DACH1Q9UI36 760 aa19.88■□□□□ 0.77
ACTN4-201ENST00000252699 ZNF594Q96JF6 807 aaPredicted RBP19.87■□□□□ 0.77
ACTN4-201ENST00000252699 TNNI3KQ59H18 835 aa19.87■□□□□ 0.77
ACTN4-201ENST00000252699 FPGT-TNNI3KV9GXZ4 949 aa19.87■□□□□ 0.77
ACTN4-201ENST00000252699 RTL1A6NKG5 1358 aa19.87■□□□□ 0.77
ACTN4-201ENST00000252699 OFD1O75665 1012 aa19.87■□□□□ 0.77
ACTN4-201ENST00000252699 SSBP05455 408 aaKnown RBP eCLIP19.87■□□□□ 0.77
ACTN4-201ENST00000252699 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.87■□□□□ 0.77
ACTN4-201ENST00000252699 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
ACTN4-201ENST00000252699 CCDC96Q2M329 555 aa19.87■□□□□ 0.77
ACTN4-201ENST00000252699 USP21Q9UK80 565 aa19.87■□□□□ 0.77
ACTN4-201ENST00000252699 DCAF8L1A6NGE4 600 aa19.86■□□□□ 0.77
ACTN4-201ENST00000252699 GSTO1P78417 241 aa19.86■□□□□ 0.77
ACTN4-201ENST00000252699 STIM1Q13586 685 aa19.86■□□□□ 0.77
ACTN4-201ENST00000252699 ZGPATQ8N5A5 531 aaKnown RBP19.86■□□□□ 0.77
ACTN4-201ENST00000252699 USP26Q9BXU7 913 aa19.86■□□□□ 0.77
ACTN4-201ENST00000252699 ERBB3P21860 1342 aa19.86■□□□□ 0.77
ACTN4-201ENST00000252699 ZNF335Q9H4Z2 1342 aaPredicted RBP19.86■□□□□ 0.77
ACTN4-201ENST00000252699 NEURL1BA8MQ27 555 aa19.85■□□□□ 0.77
ACTN4-201ENST00000252699 PDE8AO60658 829 aa19.85■□□□□ 0.77
ACTN4-201ENST00000252699 KIF24Q5T7B8 1368 aa19.85■□□□□ 0.77
ACTN4-201ENST00000252699 ALKQ9UM73 1620 aa19.85■□□□□ 0.77
ACTN4-201ENST00000252699 ZNF76P36508 570 aa19.85■□□□□ 0.77
ACTN4-201ENST00000252699 CREB3L3Q68CJ9 461 aa19.85■□□□□ 0.77
ACTN4-201ENST00000252699 CARD10Q9BWT7 1032 aa19.85■□□□□ 0.77
ACTN4-201ENST00000252699 WTAPQ15007 396 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 KRT23Q9C075 422 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 A0A0U1RQG5 324 aaPredicted RBP19.84■□□□□ 0.77
ACTN4-201ENST00000252699 NLRP5P59047 1200 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 CCDC183Q5T5S1 534 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 Q6ZUG5 572 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 ANO8Q9HCE9 1232 aaPredicted RBP19.84■□□□□ 0.77
ACTN4-201ENST00000252699 STX8Q9UNK0 236 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 KIF5BP33176 963 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 ESR2Q92731 530 aa19.84■□□□□ 0.77
ACTN4-201ENST00000252699 RAD50Q92878 1312 aa19.83■□□□□ 0.77
ACTN4-201ENST00000252699 SLC26A6Q9BXS9 759 aa19.83■□□□□ 0.77
ACTN4-201ENST00000252699 KAT14Q9H8E8 782 aa19.83■□□□□ 0.77
ACTN4-201ENST00000252699 BMP2KQ9NSY1 1161 aaPredicted RBP19.83■□□□□ 0.77
ACTN4-201ENST00000252699 CDK12Q9NYV4 1490 aaPredicted RBP19.83■□□□□ 0.77
ACTN4-201ENST00000252699 ZC3H12CQ9C0D7 883 aaKnown RBP19.83■□□□□ 0.77
ACTN4-201ENST00000252699 ZBTB43O43298 467 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms