RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 C3orf67Q6ZVT6 689 aa28.64■■■□□ 2.18
APOE-201ENST00000252486 CNKSR1Q969H4 720 aa28.64■■■□□ 2.18
APOE-201ENST00000252486 RBM17Q96I25 401 aaKnown RBP28.64■■■□□ 2.18
APOE-201ENST00000252486 ALDH1B1P30837 517 aa28.63■■■□□ 2.17
APOE-201ENST00000252486 C20orf194Q5TEA3 1177 aa28.63■■■□□ 2.17
APOE-201ENST00000252486 DDX46Q7L014 1031 aaKnown RBP28.63■■■□□ 2.17
APOE-201ENST00000252486 ZNF622Q969S3 477 aaKnown RBP eCLIP28.63■■■□□ 2.172e-7■□□□□ 8.5
APOE-201ENST00000252486 SUCLG2Q96I99 432 aa28.63■■■□□ 2.17
APOE-201ENST00000252486 PIM2Q9P1W9 311 aa28.63■■■□□ 2.17
APOE-201ENST00000252486 COG6Q9Y2V7 657 aa28.63■■■□□ 2.17
APOE-201ENST00000252486 ZBTB7BO15156 539 aaPredicted RBP28.62■■■□□ 2.17
APOE-201ENST00000252486 CSF1RP07333 972 aa28.62■■■□□ 2.17
APOE-201ENST00000252486 KCNA3P22001 575 aa28.62■■■□□ 2.17
APOE-201ENST00000252486 FOXO4P98177 505 aa28.62■■■□□ 2.17
APOE-201ENST00000252486 TTLL11Q8NHH1 800 aa28.62■■■□□ 2.17
APOE-201ENST00000252486 CRAMP1Q96RY5 1269 aa28.62■■■□□ 2.17
APOE-201ENST00000252486 RTL9Q8NET4 1388 aa28.62■■■□□ 2.17
APOE-201ENST00000252486 GNAI2P04899 355 aa28.6■■■□□ 2.17
APOE-201ENST00000252486 TTLL6Q8N841 843 aa28.6■■■□□ 2.17
APOE-201ENST00000252486 KAZALD1Q96I82 304 aa28.59■■■□□ 2.17
APOE-201ENST00000252486 BRCA1P38398 1863 aaKnown RBP28.58■■■□□ 2.17
APOE-201ENST00000252486 RABL6Q3YEC7 729 aaPredicted RBP28.58■■■□□ 2.17
APOE-201ENST00000252486 LMBR1LQ6UX01 489 aa28.58■■■□□ 2.17
APOE-201ENST00000252486 BICC1Q9H694 974 aaKnown RBP28.58■■■□□ 2.17
APOE-201ENST00000252486 DALRD3Q5D0E6 543 aaKnown RBP28.57■■■□□ 2.16
APOE-201ENST00000252486 EPHA10Q5JZY3 1008 aa28.57■■■□□ 2.16
APOE-201ENST00000252486 LRRFIP2Q9Y608 721 aaKnown RBP28.57■■■□□ 2.16
APOE-201ENST00000252486 GRAPQ13588 217 aa28.56■■■□□ 2.16
APOE-201ENST00000252486 GRAPLQ8TC17 118 aaPredicted RBP28.56■■■□□ 2.16
APOE-201ENST00000252486 BBOX1O75936 387 aa28.55■■■□□ 2.16
APOE-201ENST00000252486 CDC5LQ99459 802 aaKnown RBP28.55■■■□□ 2.16
APOE-201ENST00000252486 GREM2Q9H772 168 aa28.55■■■□□ 2.16
APOE-201ENST00000252486 CHMP3Q9Y3E7 222 aa28.55■■■□□ 2.16
APOE-201ENST00000252486 IFIT5Q13325 482 aaKnown RBP28.54■■■□□ 2.16
APOE-201ENST00000252486 TMC4Q7Z404 712 aa28.54■■■□□ 2.16
APOE-201ENST00000252486 ANKRD44Q8N8A2 993 aa28.54■■■□□ 2.16
APOE-201ENST00000252486 CCDC85AQ96PX6 553 aaPredicted RBP28.54■■■□□ 2.16
APOE-201ENST00000252486 ANKRD18BA2A2Z9 1011 aa28.53■■■□□ 2.16
APOE-201ENST00000252486 ITGA6P23229 1130 aa28.53■■■□□ 2.16
APOE-201ENST00000252486 CCDC57Q2TAC2 916 aa28.53■■■□□ 2.16
APOE-201ENST00000252486 FAM161AQ3B820 660 aa28.53■■■□□ 2.16
APOE-201ENST00000252486 PRPF40BQ6NWY9 871 aaKnown RBP28.53■■■□□ 2.16
APOE-201ENST00000252486 ZBTB40Q9NUA8 1239 aa28.52■■■□□ 2.16
APOE-201ENST00000252486 RPS8P62241 208 aaKnown RBP28.51■■■□□ 2.15
APOE-201ENST00000252486 ANKRD18AQ8IVF6 992 aa28.51■■■□□ 2.15
APOE-201ENST00000252486 BCS1LQ9Y276 419 aa28.51■■■□□ 2.15
APOE-201ENST00000252486 MTX1Q13505 466 aa28.5■■■□□ 2.15
APOE-201ENST00000252486 SOGA3Q5TF21 947 aa28.5■■■□□ 2.15
APOE-201ENST00000252486 TMX4Q9H1E5 349 aaPredicted RBP28.5■■■□□ 2.15
APOE-201ENST00000252486 SEC31BQ9NQW1 1179 aa28.5■■■□□ 2.15
APOE-201ENST00000252486 PPEF1O14829 653 aaPredicted RBP28.49■■■□□ 2.15
APOE-201ENST00000252486 IGHMBP2P38935 993 aaKnown RBP28.49■■■□□ 2.15
APOE-201ENST00000252486 AAMPQ13685 434 aa28.49■■■□□ 2.15
APOE-201ENST00000252486 CC2D2BQ6DHV5 1058 aa28.49■■■□□ 2.15
APOE-201ENST00000252486 CRBNQ96SW2 442 aa28.49■■■□□ 2.15
APOE-201ENST00000252486 CACNA1SQ13698 1873 aa28.49■■■□□ 2.15
APOE-201ENST00000252486 SLX4Q8IY92 1834 aa28.48■■■□□ 2.15
APOE-201ENST00000252486 ARFGEF1Q9Y6D6 1849 aa28.48■■■□□ 2.15
APOE-201ENST00000252486 TAF7LQ5H9L4 462 aa28.48■■■□□ 2.15
APOE-201ENST00000252486 CELF1Q92879 486 aaKnown RBP28.48■■■□□ 2.15
APOE-201ENST00000252486 DCAF8L1A6NGE4 600 aa28.47■■■□□ 2.15
APOE-201ENST00000252486 GRIPAP1Q4V328 841 aa28.46■■■□□ 2.15
APOE-201ENST00000252486 WWC3Q9ULE0 1092 aa28.46■■■□□ 2.15
APOE-201ENST00000252486 ATP6V0A2Q9Y487 856 aa28.46■■■□□ 2.15
APOE-201ENST00000252486 GPR162Q16538 588 aa28.45■■■□□ 2.14
APOE-201ENST00000252486 SP8Q8IXZ3 490 aa28.45■■■□□ 2.14
APOE-201ENST00000252486 PELP1Q8IZL8 1130 aaKnown RBP28.45■■■□□ 2.14
APOE-201ENST00000252486 C7orf43Q8WVR3 580 aa28.45■■■□□ 2.14
APOE-201ENST00000252486 MPHOSPH8Q99549 860 aa28.45■■■□□ 2.14
APOE-201ENST00000252486 C1orf115Q9H7X2 142 aa28.45■■■□□ 2.14
APOE-201ENST00000252486 TAF1P21675 1872 aa28.44■■■□□ 2.14
APOE-201ENST00000252486 SRGAP3O43295 1099 aa28.44■■■□□ 2.14
APOE-201ENST00000252486 BSDC1Q9NW68 430 aaPredicted RBP28.44■■■□□ 2.14
APOE-201ENST00000252486 SRCAPQ6ZRS2 3230 aa28.43■■■□□ 2.14
APOE-201ENST00000252486 C21orf2O43822 256 aa28.43■■■□□ 2.14
APOE-201ENST00000252486 GRIN3BO60391 1043 aa28.43■■■□□ 2.14
APOE-201ENST00000252486 ATP8B2P98198 1209 aa28.43■■■□□ 2.14
APOE-201ENST00000252486 CCDC93Q567U6 631 aa28.43■■■□□ 2.14
APOE-201ENST00000252486 RPAP2Q8IXW5 612 aaPredicted RBP28.43■■■□□ 2.14
APOE-201ENST00000252486 CEP85Q6P2H3 762 aa28.41■■■□□ 2.14
APOE-201ENST00000252486 LDHAL6AQ6ZMR3 332 aa28.41■■■□□ 2.14
APOE-201ENST00000252486 RTKN2Q8IZC4 609 aa28.41■■■□□ 2.14
APOE-201ENST00000252486 FBXO3Q9UK99 471 aa28.41■■■□□ 2.14
APOE-201ENST00000252486 YBX3P16989 372 aaKnown RBP eCLIP28.4■■■□□ 2.14
APOE-201ENST00000252486 RFX5P48382 616 aaPredicted RBP28.4■■■□□ 2.14
APOE-201ENST00000252486 ZNF219Q9P2Y4 722 aaPredicted RBP28.4■■■□□ 2.14
APOE-201ENST00000252486 LRRC37AA6NMS7 1700 aa28.4■■■□□ 2.14
APOE-201ENST00000252486 SSH3Q8TE77 659 aa28.39■■■□□ 2.14
APOE-201ENST00000252486 COL4A1P02462 1669 aa28.38■■■□□ 2.13
APOE-201ENST00000252486 PNMA6EA0A0J9YXQ4 647 aa28.38■■■□□ 2.13
APOE-201ENST00000252486 HMMRO75330 724 aa28.38■■■□□ 2.13
APOE-201ENST00000252486 PTPN12Q05209 780 aaKnown RBP28.38■■■□□ 2.13
APOE-201ENST00000252486 POLA2Q14181 598 aa28.38■■■□□ 2.13
APOE-201ENST00000252486 ZNF594Q96JF6 807 aaPredicted RBP28.38■■■□□ 2.13
APOE-201ENST00000252486 COPRSQ9NQ92 184 aa28.38■■■□□ 2.13
APOE-201ENST00000252486 CNNM1Q9NRU3 951 aa28.38■■■□□ 2.13
APOE-201ENST00000252486 SPEF2Q9C093 1822 aa28.38■■■□□ 2.13
APOE-201ENST00000252486 EXOC6Q8TAG9 804 aa28.36■■■□□ 2.13
APOE-201ENST00000252486 ANKRD2Q9GZV1 360 aa28.36■■■□□ 2.13
APOE-201ENST00000252486 MINPP1Q9UNW1 487 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms